Asti028913.2
Basic Information
- Insect
- Aphodius sticticus
- Gene Symbol
- lov
- Assembly
- GCA_963966075.1
- Location
- OZ014510.1:27014855-27016758[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 6.7e-18 6.9e-15 55.9 0.0 1 44 389 432 389 433 0.96
Sequence Information
- Coding Sequence
- ATGGCTATTAATAATGAATCTCACTACTCTCTACGCTGGAACAACCATCAGTCCCACATTCTGTCATCATTCGAAGCATTGTTGCATGCTGAGGCACTAGTTGACGTCACCTTGGTCTGTGCAGGAACATCAGTGAGAGCCCATAAAGTTGTCTTAAGCGCATGTTCCCCGTTTTTCCAAAAGATTTTTTCGGAAAACCCCTGTAAACATCCTGTTATCGTCCTAAAAGACTTTAACGGATGGGAAATCCAGTCAATGGTAGATTTTATGTACAAGGGAGAGATCAGCGTTGGTAGGGAACAGTTGCCGAGTCTGATCAAAGCCGCCGAGAGTTTGCAAATACGTGGCTTAGACGACATAGGGACGAGCACAAATATTCAGAAGGAAAATCAGAATAACAACCAATCTCCGGTCCCCTCAACATCTCCCAATGACTACGATAGGAATTTTTATCAAAACGCAAGGTTTCCAACTTCTGGAACGACTATGCGAACAACAGGGGAACGATCATCACCATTATCTCCACTGCCCGGCCACAACTATGAGCACCATATGAAGTTACCACACATGACCCACTTATCCTTCCCAGAATCTCTAATTCCTAGATCAGAACAGCAGAGAACTGACTGCCAATCACCTTTACCGAGGAGGAAGCAAGCTAGACCTAGAAGACGATCTGGAGAGCTTTGCACGGCCCAAGATTTATCAACATCTATTCAGAATAAACCCCAATCACCCATGGAGGAAACAGCTGAAAATTTATGCGTTAAAAAGTCGaaggaaattaaaaaagaaaatcgcGAGCAATCCAAGACGCCGGAAACAACAGGTAGCCTTGAACTTGACCTTTCCATGACTAGTAAAGACTTTACGACATCACCACCATTGATGCAACCTTTCATGGGAATGAAACCCGATTTGGAAAACCACCTAGCATTTCCTCCCATGCCTAATGTCGCGTTGGCTATGAGCCAACCACATAGTAAGTTTTTTGGTCTGGACGCCACCTTGGGTTTATTTCCACATGGGTTAGATGGTTGCAGAAATCCGCTGTTAGAAATGGCGGACCCTAGGAGTACAGAGTCGCCACTTTATGTCAAGAAAAAGAtggGTCGACCAAAAGGACAACATTCTGCTCCCAGAGGTGGCCCACCAAGAAGTTGGACGAATGCAGAATTAACGGAAGCGCTTCAGCACGTATGGAACAAGAAGATGACTACAAGTCAGGCATCTAGAATTTTTGGAATTCCCTATAACTCCTTGCTAATGTACGTGAGGGGAAAATATGGGAAAAGCTTGAAATTGGAACAGCTAAGGAAGGATTGCATAGGCGCTCCAGGTACGCCGATGGATATGATGTCGAGTATTTCGgggaataataacaataactcaTTAAAGAACGACCGGGACGAAGCTGTGCAACCTAATACTAGGCCGAATAGTACCGAGGAGATGAGTAATCAACACATGCCTCAACAGTCCATTTTTAATCCATTTACTCAAAGTTTTTTCCCCGAGTATTCGGCATCGTTCCCCATCCCAGTAAATATGGTGCATCTGCTCCCTCAAAGCGAGAAGAACAGGGAGCATTATAGACATCCATCCCTAGACGACGATAGAAATGATAGGGTCAAGGATGAGCCTCAAGATATGTTCATGGCATCATCTCTTTCACTTGAAGATAGAAGAGAGCTGGTGCAGCAGAATGGGCAAGATTGA
- Protein Sequence
- MAINNESHYSLRWNNHQSHILSSFEALLHAEALVDVTLVCAGTSVRAHKVVLSACSPFFQKIFSENPCKHPVIVLKDFNGWEIQSMVDFMYKGEISVGREQLPSLIKAAESLQIRGLDDIGTSTNIQKENQNNNQSPVPSTSPNDYDRNFYQNARFPTSGTTMRTTGERSSPLSPLPGHNYEHHMKLPHMTHLSFPESLIPRSEQQRTDCQSPLPRRKQARPRRRSGELCTAQDLSTSIQNKPQSPMEETAENLCVKKSKEIKKENREQSKTPETTGSLELDLSMTSKDFTTSPPLMQPFMGMKPDLENHLAFPPMPNVALAMSQPHSKFFGLDATLGLFPHGLDGCRNPLLEMADPRSTESPLYVKKKMGRPKGQHSAPRGGPPRSWTNAELTEALQHVWNKKMTTSQASRIFGIPYNSLLMYVRGKYGKSLKLEQLRKDCIGAPGTPMDMMSSISGNNNNNSLKNDRDEAVQPNTRPNSTEEMSNQHMPQQSIFNPFTQSFFPEYSASFPIPVNMVHLLPQSEKNREHYRHPSLDDDRNDRVKDEPQDMFMASSLSLEDRRELVQQNGQD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00138218; iTF_00981296; iTF_00980859; iTF_00137109; iTF_00136756;
- 90% Identity
- iTF_00138218; iTF_00981296; iTF_00980859; iTF_00137109; iTF_00136756;
- 80% Identity
- iTF_00138218;