Agra021137.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Aphodius granarius
Gene Symbol
stc
Assembly
GCA_963971325.1
Location
OZ020225.1:28356173-28361769[-]

Transcription Factor Domain

TF Family
zf-NF-X1
Domain
zf-NF-X1 domain
PFAM
PF01422
TF Group
Zinc-Coordinating Group
Description
This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 16 1.9 3.1e+04 -4.0 1.6 15 19 309 313 308 313 0.81
2 16 0.16 2.5e+03 -0.6 0.5 4 10 342 348 341 352 0.95
3 16 0.00087 14 6.6 18.1 3 19 356 372 344 372 0.85
4 16 2.9e-06 0.047 14.6 11.2 1 18 408 425 408 426 0.98
5 16 2e-08 0.00032 21.5 13.4 1 19 466 484 466 484 0.98
6 16 1.2 1.9e+04 -3.4 0.6 6 10 514 518 513 518 0.88
7 16 0.00011 1.7 9.6 15.9 4 19 531 546 524 546 0.87
8 16 1.1 1.8e+04 -3.2 2.2 5 10 575 580 575 580 0.93
9 16 2 3.3e+04 -4.5 11.5 1 11 586 596 586 597 0.92
10 16 2 3.3e+04 -4.5 2.3 4 10 601 607 600 607 0.91
11 16 1.4e-07 0.0022 18.8 15.6 1 19 613 631 613 631 0.99
12 16 0.37 6e+03 -1.8 1.3 5 10 659 664 659 664 0.94
13 16 0.00094 15 6.5 14.8 1 19 670 687 670 687 0.82
14 16 0.19 3e+03 -0.8 0.3 6 11 690 695 690 696 0.94
15 16 0.0006 9.8 7.1 18.8 1 18 723 741 713 746 0.81
16 16 0.24 3.9e+03 -1.2 16.1 4 19 754 772 752 772 0.88

Sequence Information

Coding Sequence
ATGTCCAATTGGAACTACCAACAGCAGTACCACAATAACTCCCGGTACTCGAACAATCAAGATAGATTTAACGGAGACGGTGTTGATAATTTTACCAACTTCAATGCAACCTTCTATAACCGAACCCACACCGAAGCCAGGGGCTCAACAAATTCGCAACGTTTCGACGTAGAATCCTCAAATTTACATGCAACAGCAGCCGAGTTTACACccagaaatttgacagttaccgGAGAGGCAACTGCAAGCACAGGAACTGTCCGTAAAAATCCAAAATACAAACCCTGGAAGCAAAATTATGGAAATAACAGCCGATATAAAGAACAAAATGGCTTTAACAACCACGAAAGATACAACAATCGTTCCGGTAGAGTTAATAACAGATCGGATTACGATAATAACGAGAAATACGATGACAAGGTTGAAAATAGATACGATAACAAGAATCCGAACAAGTTAGAGAATAATGCGGAGTCTGATAATCGGAGATataaaaatgggaagtctcagAATAGTGATAATTATTCGCAGGATGACGATAGGTGTAGAGATAGGTTTTCTAAAGGTTACGGAAAGAATAGTAAACAGGATAATAGCAAATATTTCGAGAAGAATAATGGTTACGGGTATAAGAATAAGTGGAATAGAGGTGGTGGTAATCAAAAGCAGAATAAGAATGCGTCAGAAACTAATTGGAGGCAGAACAAGGCAAAGGAACGGAGGAATAGTCTTCAAAATAAGCAATCAAACCAGCGAGAACGTCTTCAGGACATGCTGGAACGTTTCCAGCTGGAATGTATGGTGTGCTGCGAACGCCTCCGCCATACTGATTCCGTCTGGTCCTGCAAGCAATGCTACAACATCCTACATCTCTCGTGCATAAAGAAATGGGCGAATACGTCGAAACTCGATTGCGGTTGGCGATGCCCCGCCTGTCAAAACACGTATGCTTCCGTTCCCGAGGAATACTTCTGCTACTGCGAGAAGATGTCAAACCCGAAGTACGAACCCGGCCAGGCCCCGCACAGTTGCGGGGAAATCTGCGGCAGGAAAGGGCGATTCTGCGAACACCCCTGCGTCTTACTATGCCACCCGGGGCCTTGCCCGGAATGTACGGTCTCCGTTAGCAGATCGTGCGGTTGCGGAGCAACGAAGGCGACTGTTTCCTGCAATACCGACGCCCCTATCGTCTGCGGGAACCAATGTAATAAATTGTTAAATTGCGGGGTGCATGTTTGCGCTAAGCAATGTCACGCCGGGGATTGCGCTGAATGCGGGGAATTTGTTTGTCAGGAGTGTTATTGTGGGAAGGTTGGAAGGAAGGTTAAATGCACGGAGGAGACGATAAACGTGGAGAGATACGAGTGCGATGATGTTTGTGGGAAGTTGCTGAATTGCGGGAACCACAGGTGTGAACTTGGCTGTCACTCGGGAAGCTGTGCCCCATGCTCCACGTCACCTACGGTTATAACCACCTGCCCGTGTGGACAGACAAAGCTGAACGACGAGAGAACTTCCTGTTTTGACCCAATACCTTCTTGCGATAAGGTCTGTAACAAGTTATTGAAGTGTGGTCAACCCAGTGATCCTCATAGATGTCAAGAGAAATGTCACCAGAAGGAGTGCCCACCGTGTCCCCTCATAACAATGGTCAGGTGCCGTTGTGGCTATATGGACAAGGAGGTGTCATGTGCTGAGCTTACCAGCAAAGCTGATGATGCCCGCTGTCAGAAGAAATGCACAAAGATGAGACTATGCTGCAAGCACAAATGCAACCAGTACTGCTGCATCGAGGTCGACCACCACTGCACGCTGATCTGCAACCGCGCGTTATCGTGCGGGCTGCACCGATGCGAGCAGGAGTGCCACAGGGGCCGCTGCGGACAGTGCCCCCGCATGAGCTTCGACGAACTGTTCTGCGAGTGCGGCGCCAGCGTCGTCTACCCGCCTGTTGCGTGCGGAACCCGACCGCCCACCTGCAACCAGCCCTGCTCCAGACCGAGACCGTGCGGGCACCCCGTGGCGCACACTTGCCATACCGGGCCTTGTCCACCTTGCACGGTCCTCTGCAAGCGATGGTGCCACGGCAAACACGAACAACGCGGCACTATTTTGTGTCATCAGGACGAGTTTAGTTGCGGATTACCGTGTGGAAAAGAGCTTCCATGTCGTCAACATAAGTGTATCCAGGCTTGTCATAAAGGCTCCTGTGCGTTGCCTTGTGTACAACCGTGTCCTAAGCCACGCCTAAGCTGCGACCATCCTTGTAACCAACCTTGCCACCCACAAACACCGTGTCCCGACACACCGTGCCGTCAGACGGTAAAAGTCACATGCCAGTGCGGTCTGCGTTCGAGCACAAGGTCTTGCATGGACTTAGCTGGGGAATACCAAGCGATTGCCATGTCCCAACTTGCGTCCAAGATGGCAGATATACAAAAAGGACAAACCGTGGATTTAACGGACTTTGTCAGTGGACAGAAGAAGCATGTTACACCGAAAACCTTGGAATGTACGGAGGAATGTCGTGTTGTGGAACGTAATCGCCGCTTAGCGATAGGTCTTCAAATCCGCAATCCCGACTTGAGCGCAAAATTAACACCTCGCTATTCCGACTTTATGCGTGGATGGGCTAAAAAGGACCCGAGATTCTGTCAACATATTCACGATAAGCTCAGTGAACTAGTACAGCTTGCCAAGCAGAGTAAGCAGAAGAGTCGTTCTCATTCCTTTGAGACGATGAATAGGGATAAGAGGCACCTTGTGCACGAGTATTGTGAGCATTTCGGTTGCGAGAGTGAAGCTTACGATGCGGAACCGAATAGGAATGTGGTTGCGACGGCGTTTCGAGATAAATCGTGGTTGCCTAGCGTTAGTTTGATGGAGTTGATCCAGAGGGAGAATGGGCAGAGGAAGGTGCCAGGTCCGATGGTTAGCGCGAAGAGTGTTGTCCCGAAGAGGGAGGTGACGTCATTTAAAGTTAGTGCGAGGCCGAGTAAAGCGACGACTCAACCGGGAGAGTATGTGGATTATTTCGACGATCCCCCTATATGA
Protein Sequence
MSNWNYQQQYHNNSRYSNNQDRFNGDGVDNFTNFNATFYNRTHTEARGSTNSQRFDVESSNLHATAAEFTPRNLTVTGEATASTGTVRKNPKYKPWKQNYGNNSRYKEQNGFNNHERYNNRSGRVNNRSDYDNNEKYDDKVENRYDNKNPNKLENNAESDNRRYKNGKSQNSDNYSQDDDRCRDRFSKGYGKNSKQDNSKYFEKNNGYGYKNKWNRGGGNQKQNKNASETNWRQNKAKERRNSLQNKQSNQRERLQDMLERFQLECMVCCERLRHTDSVWSCKQCYNILHLSCIKKWANTSKLDCGWRCPACQNTYASVPEEYFCYCEKMSNPKYEPGQAPHSCGEICGRKGRFCEHPCVLLCHPGPCPECTVSVSRSCGCGATKATVSCNTDAPIVCGNQCNKLLNCGVHVCAKQCHAGDCAECGEFVCQECYCGKVGRKVKCTEETINVERYECDDVCGKLLNCGNHRCELGCHSGSCAPCSTSPTVITTCPCGQTKLNDERTSCFDPIPSCDKVCNKLLKCGQPSDPHRCQEKCHQKECPPCPLITMVRCRCGYMDKEVSCAELTSKADDARCQKKCTKMRLCCKHKCNQYCCIEVDHHCTLICNRALSCGLHRCEQECHRGRCGQCPRMSFDELFCECGASVVYPPVACGTRPPTCNQPCSRPRPCGHPVAHTCHTGPCPPCTVLCKRWCHGKHEQRGTILCHQDEFSCGLPCGKELPCRQHKCIQACHKGSCALPCVQPCPKPRLSCDHPCNQPCHPQTPCPDTPCRQTVKVTCQCGLRSSTRSCMDLAGEYQAIAMSQLASKMADIQKGQTVDLTDFVSGQKKHVTPKTLECTEECRVVERNRRLAIGLQIRNPDLSAKLTPRYSDFMRGWAKKDPRFCQHIHDKLSELVQLAKQSKQKSRSHSFETMNRDKRHLVHEYCEHFGCESEAYDAEPNRNVVATAFRDKSWLPSVSLMELIQRENGQRKVPGPMVSAKSVVPKREVTSFKVSARPSKATTQPGEYVDYFDDPPI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00981974;
90% Identity
-
80% Identity
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