Agra023655.1
Basic Information
- Insect
- Aphodius granarius
- Gene Symbol
- ZNF131
- Assembly
- GCA_963971325.1
- Location
- OZ020227.1:1554618-1556483[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 13 0.00078 0.067 14.5 3.6 1 23 133 155 133 155 0.97 2 13 0.0055 0.47 11.8 0.2 2 23 180 201 179 201 0.97 3 13 0.0014 0.12 13.7 1.2 2 23 206 228 206 228 0.96 4 13 0.00011 0.0092 17.2 3.5 1 23 291 313 291 313 0.99 5 13 0.0034 0.3 12.5 6.6 2 23 318 340 318 340 0.96 6 13 0.0012 0.1 13.9 5.0 1 23 367 389 367 389 0.98 7 13 0.0054 0.46 11.9 2.5 1 23 395 418 395 418 0.96 8 13 2.4e-05 0.002 19.3 1.7 1 23 431 453 431 453 0.98 9 13 4.5e-07 3.9e-05 24.7 0.4 1 23 459 482 459 482 0.98 10 13 9.2e-06 0.00079 20.6 0.6 1 23 488 511 488 511 0.95 11 13 9.7e-06 0.00083 20.5 1.6 1 23 520 542 520 542 0.98 12 13 6.9e-06 0.00059 21.0 1.4 1 23 548 570 548 570 0.97 13 13 7.8e-06 0.00067 20.8 3.7 1 23 576 598 576 598 0.98
Sequence Information
- Coding Sequence
- ATGGCTTCTATCTGCAGATTGTGTTTAAATTCTAATGCCAGTCACTATGAAACCATCGCAGCAGTTGAAGAGAAATATTTCGAGTTAATCCTACCGGAAATTGATATTCAGTTGGTTTCTTCGCCTGTATTCTGTCAGAGTTGTATCGAGTTACTACAGACCACCTATTCGTTCAAGAGCACCTGCATTGAAACCGAGAAAATGTTAAAGTTGTACGCTTCAACGTACGGCGAAACCCAATTATTACTTAATACCGTACTCCAGAACGAATTTTGGAATAAAATTCAAATGCAGTTCGGTAACAACGATCCTCGTGAGCTACTAAACAAAGACGTTAAAATGGAATGTGAGAACGACTCGAGTTACGGATGTGATTTTGACATGTCGGATGACGAATTTTCCTGCAGTGTATGCCAGAAAAGTTTCGATTCGGAAATTCAATTATGCCACCATGGAAAAGTACATAAAGAACAGTTGAAATGTAAGATTTGTTCGGGTACGAAAACCCACACTACGATACCCGATGATAAGAAATTACAATGTCAGATTTGTGAACTGAAATTCGACGCTAACGATAAATTAGTTGATCATTTAAAATCTCATTTTGAAAAACCCAAATGCTTGCAGTGCGAGAAACGGTTTTATAACGTATCCTCCATGCGGCGCCATCTAGCGAGAGTCCACAAGGTAGACATCGACGTGGGTGAAGAAGACGACACCTCCGAGAATTGGCGGGATGAGATTAATTTCGATGTGAACGAGGACAAAATGGAACAAACCCTAAATAAACATTTGGACTTATTTGAGAACCCGGCTAAAATCGAAAAGACCGAATCTAGCCACGAAGATCAGATAGCAAGCGGTCGACCGTTCAAATGCGAACTGTGCAATAAATCTTACAACGTCAGGAGTTGTCTTTTGGATCATTTAAAAACGCATATGCGTCGCCCAACTTGTAAACTCTGCAATAAATCTTACTATAACATGCACTGTTTAAAACGACACATGATGCAGTTACATAAAATCGAGATTAGCACAAAAATCGACGAATTAAACGAACATATTAAGTTGGAGATACTCAATAACCCACCCCCTAAATACACCTGTGAGACGTGCAGTAAACAATTCGGACATAAATCGTCGTTCGATCGACATAAATTGACTCACACCGGTCAAAAAACATTCATCTGTGACTTCTGCCAGAAAGGATTTCTGACTAAGACTTATCTGGAAAGGCATATTTCCGTGTGTCACTTGGGAATACGTCCCAAACGAAAATTGGAACGTAATTTTACTTGTGATACCTGCGGATTAACCACAAATAATAAACACACTTTAATTCAGCATATTCGAATTCATACGGGCGAACGACCGTATAAGTGTGATATTTGCGATAAGGCCTTTGCGCAGAGTAGTTCTTTGGGTACTCATAAGCGTACGGTGCACTCTACTGAGCGTTTGTTTACTTGCGAATATTGCAGTAAGTCGTTTAATGCGAAAGGATCCCTGACCAAGCATATTTTAGAGGTGCATCTGGTTGATAAAATTGAGAAGAAGTTTGTTTGTAATTTTTGTGGGAAAAAGTATCGATTGCAAAGTCAGCTGAACAGTCATCTGAAGTGGCATATGGCAGATAGGCAGTTCAGCTGTGATATATGCGGGAAACCGTTTGTGGATAAGCACTCGGTGAAAAAGCACAGAGTGACCCATTTTGCCGAGAAGCAACACAAGTGTGAGATCTGTGGTAAAGGATTCCATCAGAAGTATAATATTAAGATACATATGAAGGTTCATTCTAGAGTTCCTTAA
- Protein Sequence
- MASICRLCLNSNASHYETIAAVEEKYFELILPEIDIQLVSSPVFCQSCIELLQTTYSFKSTCIETEKMLKLYASTYGETQLLLNTVLQNEFWNKIQMQFGNNDPRELLNKDVKMECENDSSYGCDFDMSDDEFSCSVCQKSFDSEIQLCHHGKVHKEQLKCKICSGTKTHTTIPDDKKLQCQICELKFDANDKLVDHLKSHFEKPKCLQCEKRFYNVSSMRRHLARVHKVDIDVGEEDDTSENWRDEINFDVNEDKMEQTLNKHLDLFENPAKIEKTESSHEDQIASGRPFKCELCNKSYNVRSCLLDHLKTHMRRPTCKLCNKSYYNMHCLKRHMMQLHKIEISTKIDELNEHIKLEILNNPPPKYTCETCSKQFGHKSSFDRHKLTHTGQKTFICDFCQKGFLTKTYLERHISVCHLGIRPKRKLERNFTCDTCGLTTNNKHTLIQHIRIHTGERPYKCDICDKAFAQSSSLGTHKRTVHSTERLFTCEYCSKSFNAKGSLTKHILEVHLVDKIEKKFVCNFCGKKYRLQSQLNSHLKWHMADRQFSCDICGKPFVDKHSVKKHRVTHFAEKQHKCEICGKGFHQKYNIKIHMKVHSRVP
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -