Basic Information

Insect: Aphodius granarius
Gene Symbol: ZNF236
Assembly: GCA_963971325.1
Location: OZ020223.1:29223774-29234978[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 25 0.005 0.43 12.0 0.2 2 23 101 122 100 122 0.95

2 25 0.0011 0.092 14.1 2.4 1 23 128 150 128 150 0.98

3 25 0.00029 0.025 15.9 0.9 2 23 156 177 156 177 0.97

4 25 0.019 1.6 10.2 1.3 1 23 183 205 183 205 0.98

5 25 0.0023 0.2 13.0 1.3 1 23 218 240 218 240 0.94

6 25 2.1e-06 0.00018 22.6 3.5 2 23 266 287 265 287 0.98

7 25 2.4e-06 0.0002 22.4 1.5 1 23 293 315 293 315 0.98

8 25 4.9e-05 0.0042 18.3 0.8 1 23 321 344 321 344 0.97

9 25 0.0091 0.78 11.1 1.5 1 23 354 377 354 377 0.96

10 25 3.4e-07 2.9e-05 25.1 0.7 1 23 455 477 455 477 0.98

11 25 2.4e-05 0.0021 19.2 4.4 1 23 483 505 483 505 0.98

12 25 0.0019 0.16 13.3 1.6 1 23 511 533 511 533 0.99

13 25 0.1 8.6 7.9 2.9 1 23 542 564 542 564 0.99

14 25 0.0068 0.59 11.5 10.0 1 23 624 646 624 646 0.99

15 25 0.00014 0.012 16.9 0.4 1 23 652 674 652 674 0.97

16 25 0.002 0.18 13.2 3.3 1 23 679 702 679 702 0.95

17 25 0.0025 0.21 12.9 2.5 1 23 708 731 708 731 0.96

18 25 0.17 15 7.1 0.6 2 21 1038 1057 1037 1058 0.93

19 25 1.5e-06 0.00012 23.1 1.9 2 23 1118 1139 1117 1139 0.98

20 25 6.9e-07 5.9e-05 24.1 2.0 3 23 1147 1167 1145 1167 0.98

21 25 0.1 8.6 7.9 3.9 2 23 1176 1197 1175 1197 0.96

22 25 0.0036 0.31 12.4 1.3 1 23 1203 1225 1203 1225 0.97

23 25 2.2e-05 0.0019 19.4 2.5 1 23 1347 1369 1347 1369 0.98

24 25 0.0018 0.15 13.4 0.3 1 23 1372 1394 1372 1394 0.97

25 25 0.00071 0.061 14.6 0.8 1 23 1400 1423 1400 1423 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	25	0.005	0.43	12.0	0.2	2	23	101	122	100	122	0.95
2	25	0.0011	0.092	14.1	2.4	1	23	128	150	128	150	0.98
3	25	0.00029	0.025	15.9	0.9	2	23	156	177	156	177	0.97
4	25	0.019	1.6	10.2	1.3	1	23	183	205	183	205	0.98
5	25	0.0023	0.2	13.0	1.3	1	23	218	240	218	240	0.94
6	25	2.1e-06	0.00018	22.6	3.5	2	23	266	287	265	287	0.98
7	25	2.4e-06	0.0002	22.4	1.5	1	23	293	315	293	315	0.98
8	25	4.9e-05	0.0042	18.3	0.8	1	23	321	344	321	344	0.97
9	25	0.0091	0.78	11.1	1.5	1	23	354	377	354	377	0.96
10	25	3.4e-07	2.9e-05	25.1	0.7	1	23	455	477	455	477	0.98
11	25	2.4e-05	0.0021	19.2	4.4	1	23	483	505	483	505	0.98
12	25	0.0019	0.16	13.3	1.6	1	23	511	533	511	533	0.99
13	25	0.1	8.6	7.9	2.9	1	23	542	564	542	564	0.99
14	25	0.0068	0.59	11.5	10.0	1	23	624	646	624	646	0.99
15	25	0.00014	0.012	16.9	0.4	1	23	652	674	652	674	0.97
16	25	0.002	0.18	13.2	3.3	1	23	679	702	679	702	0.95
17	25	0.0025	0.21	12.9	2.5	1	23	708	731	708	731	0.96
18	25	0.17	15	7.1	0.6	2	21	1038	1057	1037	1058	0.93
19	25	1.5e-06	0.00012	23.1	1.9	2	23	1118	1139	1117	1139	0.98
20	25	6.9e-07	5.9e-05	24.1	2.0	3	23	1147	1167	1145	1167	0.98
21	25	0.1	8.6	7.9	3.9	2	23	1176	1197	1175	1197	0.96
22	25	0.0036	0.31	12.4	1.3	1	23	1203	1225	1203	1225	0.97
23	25	2.2e-05	0.0019	19.4	2.5	1	23	1347	1369	1347	1369	0.98
24	25	0.0018	0.15	13.4	0.3	1	23	1372	1394	1372	1394	0.97
25	25	0.00071	0.061	14.6	0.8	1	23	1400	1423	1400	1423	0.97

Sequence Information

Coding Sequence: ATGAAGTCTGCCCAAGATATGAATGGGGAACAATTCGTCTATATCCCTTTCACGTCCATTCAGAATATCTCAAGCTTGCAAGGGTTGACATTATCTAAAGACATTCTGGTTAGGATACCTTCCGTCGCAGACGGATCGATACCATTTTTAGACCTATCTCAGGCACCTACACTTACTTTAGAATCAGGGATCATTGAAAACAATTCGGTAAATCAAAATGAGTCTAATCCAGTTGAAGAGGGCAAAATGGAAGTTACAACTGACCCTGTCCAAAAGAAAAAATCAAAAAGTGATCTTGTGAAATGCATGATATGCGGGGAAAGTTTTCCGAAAGGTATTAGTTATAAGCGTCACATGGAATTTCACAAAAATATGAAGAAATTTAAGTGTAAACATTGCTTTGAGAGCTATAATGTCGAAGATAATTTCAAATTGCACATGGCGATACACAATTCTGGCACTCCTACTTGTCCATTATGTAACAGAAAGTTTCAGAGACTAGCCAGTTTAAAATCACATTTGTTAATGCATGAAGTTGAAGAAACGTTTACCTGTAAAGAATGTCAAGCAGAATTCGATAAAGAGACTGATTATTATAAGCATTTAGAGAAACATAATTCCGTGGAAGAACCGCAGGATGAGAAGGTTCCTTTCACTTGCACATATTGTAATTATGTGTTTGAAGATCGTAAAGGATATAAGGAACATGTGGCTTTTCATATGAAATTGAAAAAATTTGTATTCAATTCAAAACACAGAAAACGGAAAACGGCATGTAATAAAGACCACCCCAATAAATGTAGTATTTGTGATAAGTCTTTTACAAAAAGCTGCTTGCTGGAGAGGCATATGAGGGTCCATACTGGAGAACGGCCTTTTGAgTGCCCAAAATGCAATAAACGATTCACACAGAAGAACACACTAACTGTACATCTGGCAAAACATGAAGGTTACAAACCATACAAGTGCACCCTCTGTCCAGCTTCATTCTTTCAAAAAGGAAATTTACGTGTACATGTCCAGAAAACCCACATAGTGCCTCAAGGTGTCTCCAAAGTCTACAAGTGTACCCAGTGCACGTGCGTCTTCAAGAAATTAGCCCCGCTGAATGCCCACGTCACAAAAGCGCACTGCGGGATAGTTCAAGTGGATGACATCGATGCCGTAACGGAAAAATTGAAGGAATTAAGTGAGCTGACGTCGCAAGGCAAATCAAAAGAGGAACCGTTCCCAATTGAACATTTAAACAGGGTGGTCGAAAATCCAGCTACCGATACTTTGGTGAGATTGTCTGAAGGTGGTTTGGGTGGCATCGCCAAGCAGTATGTTGTCACTCAGAGGAAGGTGAATGACGTTAAAACGTACGTTTGTTCGTACTGTACGAAGGAGTTTAAGAAGCCCTCTGATTTGATAAGGCATCTTAGGATTCATACAAATGAGAAGCCGTTTGAgTGTCATATTTGCAAGCAAACATACACCTTAAAGTCTACATTGCGAACACACATGAATACCCACGTGGGCAAGAAGGAATACCAATGTGTAGTTTGCTTAAATCACTTCTCCTCTGTGCGTAATTTAAACATTCATCTAAGAACACACGGCGATGCCGGCCAAAGGCTCCGTTATAAATGTACCGCATGCAGTAAACTTTTCACTTCACTGCAGATGGTCTGTCAGCACTTAAAAGTGCATACTTCCTCTTCGGATGAGGTTATACCCACCGAGGGACAACCCAAGTCACAGATGCTAGCAAATGCCCTATTATTGAAGCAACCACTCGTTCAGATCGAAGATGGGCCTGCCGAGGAAGTTCCACCTCCAAAACCGCTTGGGCCCTACCTGGCCCCCTCCTTGCCTAAGAGTAGACCATACAGGTGTCACTTATGTCAGGCCGGTTTCCATCGTTGTGCGCATCTGAAGCGGCATATGAAATCTCACTCGGCGGAGAAGTTGTATAGGTGCACAGCTTGTCCAAAAATGTACAGTTCTCCCTCGGCGTTACAAAATCACAAATATGTCCACGACGACAGGAAATACTTTTGCAGCTTCTGCTACAAGAGATTTGGTACAAAGACACTACTCCAGCGTCACCTCACCTCGATGCACATGGATAGAAAACACTATGTTTGTCCGTATTGTGATAAGAAATATAGAAGAGTGGATCAGTGTCGAAGTCATATTTCAAAAGTTCATATGAAGGAAGCGATGGAGCAAAGTGGtattaaaatttcaaatggtggcGCTTTGGAAGGGGAAATGCTGGACTTAAAAACGGTTCAAACGGCCGATTCTTATCTGGAAGAGGCCCTGAAGATAAATAGCGAAGAAATTAATAAGACCAAAGAGGAACTGGAGAAACTCCGTGGTCTTAATGATGCTGAAGAAGTAGAACCAACAGATACTGTTCTTCAGGTGGGTGATGATTCCTCCACAAAACAACAGGAATACACGATTACATTACCAGAGGGAATCCAACTGCAAAACATGGAAATAGGACAAAATTTAACTGAGGATCCGCAGAATTTTTCCACTATATACATCAGCTACAATGATATCCAACAAATGGGTACTACTATATATGATCCTTTAACATCACAAGTAGAATATcaaGCTGTTGATCCATTATTAAATGAGCCCCAAGACGTCAATATTCTCTTTGTGGATTCACTAACGCAGAACAGCGAGCTTCCAGCGGAACATCAAAACTTCGAAACTTTTAACCAGGATATGTTCACAAACGGCATCCAAACATCCGAGCCGACAAACATTCCAATCGACATTTCCAATTCAGCCGACAAATCAGAAATTGTGGTTCCCATAGCAGCTGAGATGCAAGACAAGTTGAACATTGACCATGGAACTCAACcaaatttaatcttgagatcGGACAATCAGGACCTAACTCCTCAAGACAAAACTCTGAACGAAAACATCGTTATAACGTTAAATCACATTCCCGATCAAGAGGGAATGAAAACATCCGATTTCAattacctgcaaaatatcatGGGATTGAATCAGGCAGAAGTGGTAACACCTCACCCTGTCGACATTAGTTTGGTTAGTTCCGTTGGGAACATTTTGTACGGTGATATTGGAAACGGAGCGGTTTCCTGTGCTGTTTGTAAAATTTCCTGTGATAATATCTCTGATTTGGCTAAACATCAGTGCGTCGCAAATGAGAATTTGAACGAGGAAAATAATGGTTTAAATAGTGATTTGGTGGAGGAACATGCAAAAGAACAGgACTCTAGTGTTGCCATACATCTTGTTGATGAAGAAGATAACATAATCACTGTAAGTCCTGGACTCCTTAAGACTGAAAAACGCCTGAAATCAAAGCAGGAAGTAAGGTGCAGTATCTGCACCAAACAGTTCAAGAAATCATCCGACTTGGAAAGACACCTGAGGACTCACACTGGGGAGCGGCCGTTTGGTTGTCCGAAGTGCAACAAATCATTCTCGCTAAAATCAACGCTCAACACGCATATGAGAACCCACGATCGCTCGGACAGCACGAAGGTGTCCTGTCACATCTGCAACTCGACTTACAGCTGCAAAGCTAGCTTAAAAACTCACATGTCAATTCATACAGGTGTAAAGCCATATGCTTGCAACTTGTGCCCGGCAAAGTTTAGAACGTCAGCCCATCGCAAGACGCATATAGAAAACCACGCAAAAAATAACCAGAGGAGGAAGACGACGCTTAAAAGTAATATTAAGAATACCTTGAACTACGCCAATAATTATTTTGAGTCACTATTGGTTAACGGTGGTACTGATGGGGCTGGAAATGCACACATCAATTTGCAAACTGTTATTGAACCGACCACATTAAATGCAGTAGATCCAACAGAAAATCTTACAATCGGTGATTCTTTACCGATTGAGTTTCTCCAATTGCACAACGGTAGTTTTTTGCTGCCTGATGCCGCAGGTGATGTCTTGGGTCAACTTCAATTTGATATAGGGGCGATCCCAGAGAAGAGTATTCAAGCTGATATGACCGAACAATTGCCGTCGTTGAATCCTAAATTGTTTGAATGCAGTATCTGTAACAAACAATATTCGAGTAAGTCTGTCTTGAAGAAGCATCAGAAGAATCATAAGGATTTCAATTGTTCAAAGTGCGGCAAGGAATTTGATAGTATAGATGCTGTGGAGAAGCATAGTAAAGTTCATCAGGGTTACAGGCCGTACTCGTGTTTGCACTGTTTGAATAGTTTTAGCGATGCTGCTGCATTGAAGACGCATATAAAAAGGATTCATAAATTACTTGCGTAG
Protein Sequence: MKSAQDMNGEQFVYIPFTSIQNISSLQGLTLSKDILVRIPSVADGSIPFLDLSQAPTLTLESGIIENNSVNQNESNPVEEGKMEVTTDPVQKKKSKSDLVKCMICGESFPKGISYKRHMEFHKNMKKFKCKHCFESYNVEDNFKLHMAIHNSGTPTCPLCNRKFQRLASLKSHLLMHEVEETFTCKECQAEFDKETDYYKHLEKHNSVEEPQDEKVPFTCTYCNYVFEDRKGYKEHVAFHMKLKKFVFNSKHRKRKTACNKDHPNKCSICDKSFTKSCLLERHMRVHTGERPFECPKCNKRFTQKNTLTVHLAKHEGYKPYKCTLCPASFFQKGNLRVHVQKTHIVPQGVSKVYKCTQCTCVFKKLAPLNAHVTKAHCGIVQVDDIDAVTEKLKELSELTSQGKSKEEPFPIEHLNRVVENPATDTLVRLSEGGLGGIAKQYVVTQRKVNDVKTYVCSYCTKEFKKPSDLIRHLRIHTNEKPFECHICKQTYTLKSTLRTHMNTHVGKKEYQCVVCLNHFSSVRNLNIHLRTHGDAGQRLRYKCTACSKLFTSLQMVCQHLKVHTSSSDEVIPTEGQPKSQMLANALLLKQPLVQIEDGPAEEVPPPKPLGPYLAPSLPKSRPYRCHLCQAGFHRCAHLKRHMKSHSAEKLYRCTACPKMYSSPSALQNHKYVHDDRKYFCSFCYKRFGTKTLLQRHLTSMHMDRKHYVCPYCDKKYRRVDQCRSHISKVHMKEAMEQSGIKISNGGALEGEMLDLKTVQTADSYLEEALKINSEEINKTKEELEKLRGLNDAEEVEPTDTVLQVGDDSSTKQQEYTITLPEGIQLQNMEIGQNLTEDPQNFSTIYISYNDIQQMGTTIYDPLTSQVEYQAVDPLLNEPQDVNILFVDSLTQNSELPAEHQNFETFNQDMFTNGIQTSEPTNIPIDISNSADKSEIVVPIAAEMQDKLNIDHGTQPNLILRSDNQDLTPQDKTLNENIVITLNHIPDQEGMKTSDFNYLQNIMGLNQAEVVTPHPVDISLVSSVGNILYGDIGNGAVSCAVCKISCDNISDLAKHQCVANENLNEENNGLNSDLVEEHAKEQDSSVAIHLVDEEDNIITVSPGLLKTEKRLKSKQEVRCSICTKQFKKSSDLERHLRTHTGERPFGCPKCNKSFSLKSTLNTHMRTHDRSDSTKVSCHICNSTYSCKASLKTHMSIHTGVKPYACNLCPAKFRTSAHRKTHIENHAKNNQRRKTTLKSNIKNTLNYANNYFESLLVNGGTDGAGNAHINLQTVIEPTTLNAVDPTENLTIGDSLPIEFLQLHNGSFLLPDAAGDVLGQLQFDIGAIPEKSIQADMTEQLPSLNPKLFECSICNKQYSSKSVLKKHQKNHKDFNCSKCGKEFDSIDAVEKHSKVHQGYRPYSCLHCLNSFSDAAALKTHIKRIHKLLA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -