Agra003109.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Aphodius granarius
Gene Symbol
znf711
Assembly
GCA_963971325.1
Location
OZ020221.1:12606501-12619270[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 36 8.3e-05 0.0071 17.6 1.1 2 23 36 57 35 57 0.96
2 36 0.00059 0.051 14.9 1.2 1 23 62 84 62 84 0.97
3 36 0.0014 0.12 13.8 3.2 1 23 90 113 90 113 0.97
4 36 6.1e-06 0.00053 21.1 2.8 1 23 118 140 118 140 0.97
5 36 4.9e-07 4.2e-05 24.6 0.7 1 23 149 171 149 171 0.99
6 36 4.4e-06 0.00038 21.6 0.1 1 23 176 198 176 198 0.98
7 36 0.00059 0.05 14.9 0.5 2 23 211 233 210 233 0.94
8 36 0.038 3.3 9.2 0.6 2 23 239 260 238 260 0.94
9 36 0.078 6.7 8.2 5.0 1 23 266 289 266 289 0.94
10 36 7.4e-05 0.0063 17.7 0.6 1 23 294 316 294 316 0.97
11 36 0.00017 0.014 16.6 0.2 1 23 325 347 325 347 0.96
12 36 6.6e-06 0.00057 21.0 0.6 1 23 352 374 352 374 0.98
13 36 0.00012 0.0099 17.1 2.1 1 23 410 432 410 432 0.98
14 36 0.00081 0.069 14.5 2.9 3 23 439 460 437 460 0.94
15 36 8.5e-05 0.0073 17.5 0.2 2 23 467 489 466 489 0.97
16 36 1.9e-05 0.0016 19.6 0.8 1 23 495 518 495 518 0.97
17 36 7.8e-05 0.0067 17.6 1.1 1 23 523 545 523 545 0.95
18 36 0.05 4.3 8.8 0.5 1 23 554 576 554 576 0.96
19 36 0.32 27 6.3 3.2 1 23 583 605 583 605 0.96
20 36 0.037 3.2 9.2 4.8 1 23 611 633 611 633 0.98
21 36 4.3e-05 0.0037 18.5 1.5 1 21 639 659 639 660 0.96
22 36 0.49 42 5.7 0.4 2 23 676 698 676 698 0.95
23 36 0.088 7.6 8.0 2.8 2 23 704 726 703 726 0.94
24 36 0.86 74 4.9 0.3 2 23 733 755 732 755 0.96
25 36 0.0027 0.23 12.8 1.5 2 23 768 790 767 790 0.94
26 36 0.0082 0.7 11.3 0.7 1 21 795 815 795 816 0.94
27 36 0.0045 0.38 12.1 0.1 3 23 830 851 828 851 0.91
28 36 0.00027 0.023 15.9 0.6 1 23 886 909 886 909 0.96
29 36 4.7e-05 0.004 18.3 0.2 2 23 915 937 914 937 0.96
30 36 4.3e-05 0.0037 18.5 3.1 1 23 943 966 943 966 0.95
31 36 3.2e-06 0.00027 22.0 1.5 1 23 971 993 971 993 0.98
32 36 0.0021 0.18 13.1 1.2 1 23 1002 1025 1002 1025 0.96
33 36 0.00092 0.079 14.3 0.6 3 23 1033 1052 1031 1052 0.97
34 36 0.0013 0.11 13.8 1.2 2 23 1059 1080 1058 1080 0.97
35 36 1.9e-06 0.00016 22.7 1.1 1 23 1086 1108 1086 1108 0.98
36 36 3.3e-07 2.8e-05 25.1 1.4 1 23 1114 1136 1114 1136 0.99

Sequence Information

Coding Sequence
ATGGACATCGATGAAGATAAGACATGCAGGAAGTGCGGCAAAACGTCTTTGACGAGAAGAGCACACAGAATACACGAGGTGCGTTGTTACAAGGAAAAGGATCTTTCGTGTGAGATGTGCGATAAGAAGttcaaattgaaatttgacTTGCGGCAGCACGCGCGTGTCCATAACAAATCCAAATTTACCTGTCAAATATGCGACGCATTCTTTACCAGAAAACCTTCATATGATCGTCATCAGTACATACATTTACACGGGTTTCGTTATAAATGCGAGGACTGCGATGAGAAGTTCCATCTCAAATCAAGTCTAGATCATCATATAGCTTCCAAACATAAAGGAATCAGATACACGTGCGAGCAATGCGGAAAGTCATTTGCGAGCAAACATTACCTTAAGAGCCACGCGAAACTTCATAAAAAAGATTATGTTTGTCCAGAATATAAATGTTCTTTATGCGATAAGGTTTTTAACCGAAAAGGTGGAATTGAGAGGCATATGCGTATGCACAAAATTCCGTATTATGTGTGTGAGGTTTGCGGTAAATCTCTCACCTCTAAAGCGAGTTTAAACCAGCATATTATGCTTCACACAGGTGAGAAACCATTTACTTGCGAGAAGACGATACCGTGCAATTCATGTGGGAAAATGTTTAAGACGCATTTTGAAGTGCGACAACATATTGAAGTGGTACATAAAAGGGATCTATGCACATGTCTGTCGTGTGGTGCTACATTCGGTTCGAAAGCCGCTTTTGCTAGACACGAAGCTAAACATCTGAATGTATACAAGTATCACTGCGACCAGTGCGAAAAGAAATACCACGTTAAGCAAAGCCTTCAGCACCACATCGCTTTGGAACATAATGGAATTCGTTATGCGTGCGAAGAATGTGGAAAGTCGTTTAGTTCCGATCATTACTATCAGATTCACGCAGCAACGCACAGAGCTGATTATATTCCGCCGCAATACAAATGTTCAGAATGTGATAAAGTTTACGGCAGTAGAAGTGGCTTATCGTTGCACAGAATTGCACACAAGAAGCCGTTTTTCGTCTGTGATATTTGTGGCAAGAATCTCACTACAAAGAAAAGCTTAAAGCAGCACATTATGCTCCACACGGGTGAAAAGCCATTTTCCTGTGAAATATGCGGATATAGGGCTCAAGAGATTCAAGCGGCAAAGATTAAAAGGACGTACAGGCCACGAAGTACACAGCAGTATCACACATGTGAAGTCTGTAATAAGATCTTGGCTAGCCGTGACCAATATACTAAGCATATGCGTAACCACAAAGAAAAATCGCACCTTTGTGAACTATGCGACAAAAGTTTCAAGTACAATTTTATGCTCCAAGCCCATAAATTGAAGCAACACGATAAGATAAAGCCTGTCAGGTGTGACATTTGCGGACAGGCCTTGTCATCGAAAACCTACTTGAAACTACACATAAAAACAATACATTTGAAAGAGCATGAGTTTCAGTGTGATCAGTGTGACCGACGATTTGCTCAACAAAAGCAGTTGGCTCTGCACAGGaattctgaacataaaggaGTGAGATTTTTATGCACATTATGTAATAAGGTTTACAAGGACGAACCTTATTTCAAGAGGCACATGGAAACTCACGAACCAAACTACATTAAAACCGCGTATATTTGTTCGGTGTGTTCAAAGATTTTGTCGTGTGCGAAGAGTTTGGAACGGCATATGGGTATACACGAAGGCTCTAGCTCAAAGCATATCTGCGAACTGTGTGGTAAAGAGTTAAGCTGTCAGCAGACGTTGATGACTCATAAACGAATTCATACTGGCGAACGACCTTTCTCGTGTTGTTACTGCGACAAACGATTTTTGGATAAGAAGCGACTAAAGGATCATGAACGTATACATACCAAAGAAAAACCTTACGTATGCAAAACTTGCGGAAAGGGTTTTAGCCAGTGTGGAAGTTTGAAGATTCACACTAGgtaCAATACGGCATTGAACATTTTTGAAGAAACTTTCAACAGAGGTCGCACCTGTCGGATCTGCAAGCAGAATTTTCTTAGCTATAATGAAGTCGCGAAACATATGCGAGCGGCACACAAAGACAAATTAATATCGTGCGAGTTATGCAAGAAGACATTTTGCTACGATTGGTCATTCCAGCTGCATAAGTTGAAAGAACATGACAAAATTGAACCGGTCACGTGCGAATTTTGCGAACTGGAACTGCCTTCGGCGATGCGTCTGGAACATCATATAAAGAAAGTCCATTTAAAGAAGGCTTTAGGTCCAAGGAAACATCGCTTGCAGTGTAACGATTGCGATAAACAATTTGCTGCGCATGATAAACTTATAGTTCATCAGCATTACATACACCAGTCTGCTATATACACATGCAAGATTTGCAATGCTTTGTTTAAAACAAAGGGAAAGTTTGATAAGCACTTGGAGACTGATAAATGTGCAATTAAAAAGGCAGAGGTCGAATATGGTTGCTCCGTATGTTCCAAAGTGCTGTCAACACGACAAAGTTTAACTCGCCATGTTGAGGCTGTCCATAGAGGCGGTTTGAAGGTGGTGTGTGAAATTGCTTCATTATCAACGCTTAGATGCAATCCAAGTGAGCGTACTGGCGATTACACTTCAAACATCCTGAAGAAATACCCGTGCACGCTGTGCAAAAAACAGTTTAATACTATCACGCAACTGAACGCGCACAGAATACGCGTACACGAAAAGAGTAATTGGCAATGTAGCATTTGTTCAAAAACCTTTGCTGGTAGTGAGGGTCTAAAGATGCATATAAGAAGTCAGCATACGAAAGATTTACCTTTCAAGTGCAAAACATGCGATAAACGGTTTATAAGACAGGATTTCTTAACGAAACACAATCAAGTGCAACACTTAGGTGTAAGATTTTATTGTGACAAATGTGGTAAAATCTTCAAGGCGAATACCAGTTTGCGAAATCATATGCGCTTACATGAACCAGGTGACGTtaagaataaatatttttgcaaaATTTGCTCCAAGTCATTGGCTTCCAAGGCAGGATTACATTTGCATATGACTTCTTTGCACGGCGAAGAGAGCAAAGTGATTTGCGATTTCTGTGGGAAAAAGTATAGAAAAGATCGTCTCAATGTTCATATTCGAAGTCACACGGGTGACAAGCCAGTTAAGTGCCCGCATTGTGAGAAAACTTTTACCGAAACAAGAATTCTTACGGTACATTTACGAGTTCACACTAAAGAAAAACCATACTCCTGTAATATCTGTAATAAATCTTTTAGCCAAGGCGGCACATTAAAAATTCATATGCGATTTCATACTGGAGAACGTCCTTATGTCTGCACACTATGTGACAAGGGATTTACTTCCAGTACCTCATTGCGGTCACATATGAAAACACATCGAGCGTGTTCCTAA
Protein Sequence
MDIDEDKTCRKCGKTSLTRRAHRIHEVRCYKEKDLSCEMCDKKFKLKFDLRQHARVHNKSKFTCQICDAFFTRKPSYDRHQYIHLHGFRYKCEDCDEKFHLKSSLDHHIASKHKGIRYTCEQCGKSFASKHYLKSHAKLHKKDYVCPEYKCSLCDKVFNRKGGIERHMRMHKIPYYVCEVCGKSLTSKASLNQHIMLHTGEKPFTCEKTIPCNSCGKMFKTHFEVRQHIEVVHKRDLCTCLSCGATFGSKAAFARHEAKHLNVYKYHCDQCEKKYHVKQSLQHHIALEHNGIRYACEECGKSFSSDHYYQIHAATHRADYIPPQYKCSECDKVYGSRSGLSLHRIAHKKPFFVCDICGKNLTTKKSLKQHIMLHTGEKPFSCEICGYRAQEIQAAKIKRTYRPRSTQQYHTCEVCNKILASRDQYTKHMRNHKEKSHLCELCDKSFKYNFMLQAHKLKQHDKIKPVRCDICGQALSSKTYLKLHIKTIHLKEHEFQCDQCDRRFAQQKQLALHRNSEHKGVRFLCTLCNKVYKDEPYFKRHMETHEPNYIKTAYICSVCSKILSCAKSLERHMGIHEGSSSKHICELCGKELSCQQTLMTHKRIHTGERPFSCCYCDKRFLDKKRLKDHERIHTKEKPYVCKTCGKGFSQCGSLKIHTRYNTALNIFEETFNRGRTCRICKQNFLSYNEVAKHMRAAHKDKLISCELCKKTFCYDWSFQLHKLKEHDKIEPVTCEFCELELPSAMRLEHHIKKVHLKKALGPRKHRLQCNDCDKQFAAHDKLIVHQHYIHQSAIYTCKICNALFKTKGKFDKHLETDKCAIKKAEVEYGCSVCSKVLSTRQSLTRHVEAVHRGGLKVVCEIASLSTLRCNPSERTGDYTSNILKKYPCTLCKKQFNTITQLNAHRIRVHEKSNWQCSICSKTFAGSEGLKMHIRSQHTKDLPFKCKTCDKRFIRQDFLTKHNQVQHLGVRFYCDKCGKIFKANTSLRNHMRLHEPGDVKNKYFCKICSKSLASKAGLHLHMTSLHGEESKVICDFCGKKYRKDRLNVHIRSHTGDKPVKCPHCEKTFTETRILTVHLRVHTKEKPYSCNICNKSFSQGGTLKIHMRFHTGERPYVCTLCDKGFTSSTSLRSHMKTHRACS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
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90% Identity
-
80% Identity
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