Agra025452.1
Basic Information
- Insect
- Aphodius granarius
- Gene Symbol
- -
- Assembly
- GCA_963971325.1
- Location
- OZ020228.1:62477-63022[-]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 0.0035 5.2 8.1 0.5 3 44 7 56 5 58 0.87 2 3 4.6 6.8e+03 -1.9 0.0 5 13 70 78 69 81 0.86 3 3 2.6e-06 0.0039 18.1 0.3 3 44 103 152 101 154 0.91
Sequence Information
- Coding Sequence
- ATGCCTGGAGCTGCCAGACCTTATTCAAGTAAGGAGCAAAAGAAAATCGTCGAGTACATTGTCCAAAATAAGGCATATTCCTCCGTAAAAGGAAACATCTTATGGAAAAATATGGAAGAAGTATTCGAACATAGAACTTGGCAAAGTTTAAAAGAACACTACAAAAAGAAAATATATCCCAATCTGCATTTACCCATGTTTGGTCTGTCTCCAGAAGAATTGCAACTGTTTAAAGGTGGATTTACTAAATCAGCTAAAGAACGTGTGTCCAATGATGCTTCGGATTATTCTGAGCAAGTAGGAAGACCTTATACGGCAGAAGAACAGGAGAGAATTGTGGAGTACCTCCTGAAAAATAGGGTTTGTTTTTTTGTCAAAGGAAACAAGATATGGAAAGATATGGAGAGAGTGTTTGGTGATAGGACTTGGCAAAGTTTAAAAGAGCACTATAAAAAGCGAGTTTATCCTTTTCTTCATTTGGAACGGTATGGTTTGAGTgcagaaaacttacagaggttCAGAGATCGAGGTTTTGAGCAAAAATAG
- Protein Sequence
- MPGAARPYSSKEQKKIVEYIVQNKAYSSVKGNILWKNMEEVFEHRTWQSLKEHYKKKIYPNLHLPMFGLSPEELQLFKGGFTKSAKERVSNDASDYSEQVGRPYTAEEQERIVEYLLKNRVCFFVKGNKIWKDMERVFGDRTWQSLKEHYKKRVYPFLHLERYGLSAENLQRFRDRGFEQK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -