Agra007816.1
Basic Information
- Insect
- Aphodius granarius
- Gene Symbol
- TRERF1
- Assembly
- GCA_963971325.1
- Location
- OZ020222.1:16967861-16977584[-]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 5.8e-13 8.6e-10 39.4 0.0 2 43 815 856 814 859 0.95
Sequence Information
- Coding Sequence
- ATGGACTATAATCAGTATTGGTTGCAGTACTATTATAATATTAagAGTCAAAATGTCACGTCACGATCAACGTCTACttctagtcaacagtcaaaggTTTCGAGTACGACATCTTCTAATATTGCTAGTGGATCGGGGAAGGATCAAAAGCCTGTAGAATGTAATTTATGTCATAGAAAGTTCAAGAATATTCCAGCTTTGAACGGGCATATGCGATTACATGGGGGCTATTTCAAAAAGGACACTGACCATAAGAAAACAGAGAAGAAAGATCCCAATGGCCCTCCACTCCAAACAGCAAGCGTCAGTGTCCGAGCTCTCATCGAAGAGAAAATTATCAGTAAACGGAATACCAGCACGTCATTAGAAGACAACACATCTTCTCCAGTTCGCTCCGCACCACCGCTATTCCCTTTAACAGTGCATTCCCCCGCCACACCAGAAGTCGAAACTACTAAACAAAGTTCCTTCGCAGTACCAGCACCACCTCAGCACGCCCCAGCAGCTGAAAAAACACGAAGACATTCCGACGCTGAAGCGTTCACAGTGCCACGGACTCTCACAACTACACAACAAGAAGCAGACGCTTTAGCTGATCTCATATTGAAGAAGGATAAAGTTAAGAGGGCTGTCTCAGACCCAGGAAGGCACCCACAGATTATTCAGTTACAGTCTGGGGAGTCGTTTACTCTAGCTTATCAAGAAGATGGTGAATATTTGTCACCAAGTCTGCAAGATGAAGTTTTTACGCAAGAAGCTATGCTTATGCAAGGAGTAGACACCCAGCAGTTTTCTTCAATTCAGTTCCAACCTGAGTTACTACAAGACCAAGAGCATCTTCAAGAGATATCTTTAGATGACTATAACCTACCAGACTCTGTGGCAGATTCTCCTTCGTACCAGTCTACGCATTCTGTGACTCACCAAGACCTGCAAGCTGTGTTAGACTCCCCTTTACCTGAGAGTCTAGCGGAGTTTAGTACCTTTCACACGACAGGAAGCCTTGATATACCTTCCCCAGCTCAATTCTCAAACTCCCCATCGATAACTGCTCAATCACCCTTACAATCACCTTTGGTACGGCATGACTCACCAGCCTATACATATCCAACACCTCCGGCAAGCCATGAAGGACAAAGTCCTTGTTTCGGACAGAATACCATGTTGCCTATGGTGTCTCCAAAACAAAGCGACTACATCAAAGACATAGATCAGAGCAGTCAGCTGTTGACCGCCGAATTCTTCTCGTCTACCATGTCAAGTTCTGCAGCTGTCGAAGAAGCCTTAGAGGAAGTTCTACCTGGCGAAAGCATTGGCGATGAACTATACTCTTCTCTGTCTAACTCACCACCCCCACAATCTCCTATTTCCATAGGTATGACACCTGTTGCCTCCCCAAGTATACCAACCACAGCAGCCTCACCTCACAACCAAGCCAACTTTACTACGACTTCTGCTAATCCTCAGTTCTTCACGTTTCAATCTCAAATGCTGCCTAATTCCGACGACCCATTGCTATCAAGTAGCCCAAAAGATTTTCCAACAAAAAAGAAATTTGAATTCAATGGCATACCCCTAAAATTCATCAACGGAAATGCTATTATTGATTCCAACTTCACTGGAATCTTAGTAGATGCCAATGGTGAGCTAAAATTAATCCAAACCGGTCCTAATGCCTTCCAAACTAAGAACTTCTTACTAGCTACGCCGCATATCATCACCACAGTTCAAAAAGAGGAAGATAAACTGAAACCTAACCATCAGGTTAAGCAAATTGTTCTCCAAAACGCCCCAGCACAGTTTATCGTTACAAAGCCAAAGGAAGTTAAGGTAGAGCAAATCAAGCAAGAAGAATCATCCGTCTTCCTTAGCCCAACCACGATAAACAGTAGTCCAGCGAGGAATTCTAGAAAGAGGCCCCGATCTGAACCTCTACAGATGCCCGTGCTACACCAATCGAGACTGCGGGCCACCAGGAGTAAACCGCAAGGCTCAACAAAGTATACCCCTTCACCCATTTTAAATCCAAGTCGACCTGGTAGTGGACTGTATTGGAATACAAAGACAAAAGAACAAGACGACAATACGTGTTGGAGTGACCCCATACCAGAGACTGATTCAACACCGCACATCAACGTAGGTCCACAATTCCAGGCGAATATTCCGCATTATCGACCATTGGATACACGATATACCCATCATCATTGTAGAGAGGACCTATTATGGGATCCTGGTATAAACAATTCAAAAGAAGAACTTGAGATGTATTTTGACTTCGCCTGCTGTGCTGCAATGCCAGGTGGTGGGAGGAACCAGGAATATGCCATGCATGTCCTCAACTTAGCTGAAGGTAACATCCAGGAAGCCATATTGAAGCTCATGCAACCAACACCCTCGTTACCATCGAGAAGTGGGCTGTGCGACTACAGTTATAGTGAGACAGAGAAATGGTCTGCTGTCGAAAGTGAACTATTCCACCAGGCCTTGCTCAAGTATGGCAAGGATTTCACCTTGATCGCACAAGAGCTTGGAAACAAGACCATGAAGCAGTGCATCgagttttattatgtttttaagaAGTTGTGCAAGGAAGATTATAAGGTGGCCAAGCAAATGAGGGAAAGATGGTCGGGTAGTGAAATTGAAGAGAAACCTTTCGCTGACGCGAAACTCTTAGGGattGCTGATAGTGGATCACCTATTACTGAACAACGGAGTTTTCCATGCGAGTTTGTTGACTGTTCTGCGAGTTTCAACTCAAAGGCAGCTCTGAACGGTCACATAAGAATCCATGGAGGAAATTCCACCCGTAATTCACCGAATGTTCACGAGAGGAAACCCCAGTCAACGGTCACTTCGAGTCTCTCCGTGTGCCATTCGGTCGAACCTGCCGAAGATTATCCGTGCAAGATATGCGGGAAGATTTTCACGAAAATAAAGAGCAGGAGTGCACATATGAAGTCGCACCGTGTCCAGGAAGAAAGCCGCAGGACGTTCTACAGTTTCGAGCAACCTCCGTATAACATGAATACCTAG
- Protein Sequence
- MDYNQYWLQYYYNIKSQNVTSRSTSTSSQQSKVSSTTSSNIASGSGKDQKPVECNLCHRKFKNIPALNGHMRLHGGYFKKDTDHKKTEKKDPNGPPLQTASVSVRALIEEKIISKRNTSTSLEDNTSSPVRSAPPLFPLTVHSPATPEVETTKQSSFAVPAPPQHAPAAEKTRRHSDAEAFTVPRTLTTTQQEADALADLILKKDKVKRAVSDPGRHPQIIQLQSGESFTLAYQEDGEYLSPSLQDEVFTQEAMLMQGVDTQQFSSIQFQPELLQDQEHLQEISLDDYNLPDSVADSPSYQSTHSVTHQDLQAVLDSPLPESLAEFSTFHTTGSLDIPSPAQFSNSPSITAQSPLQSPLVRHDSPAYTYPTPPASHEGQSPCFGQNTMLPMVSPKQSDYIKDIDQSSQLLTAEFFSSTMSSSAAVEEALEEVLPGESIGDELYSSLSNSPPPQSPISIGMTPVASPSIPTTAASPHNQANFTTTSANPQFFTFQSQMLPNSDDPLLSSSPKDFPTKKKFEFNGIPLKFINGNAIIDSNFTGILVDANGELKLIQTGPNAFQTKNFLLATPHIITTVQKEEDKLKPNHQVKQIVLQNAPAQFIVTKPKEVKVEQIKQEESSVFLSPTTINSSPARNSRKRPRSEPLQMPVLHQSRLRATRSKPQGSTKYTPSPILNPSRPGSGLYWNTKTKEQDDNTCWSDPIPETDSTPHINVGPQFQANIPHYRPLDTRYTHHHCREDLLWDPGINNSKEELEMYFDFACCAAMPGGGRNQEYAMHVLNLAEGNIQEAILKLMQPTPSLPSRSGLCDYSYSETEKWSAVESELFHQALLKYGKDFTLIAQELGNKTMKQCIEFYYVFKKLCKEDYKVAKQMRERWSGSEIEEKPFADAKLLGIADSGSPITEQRSFPCEFVDCSASFNSKAALNGHIRIHGGNSTRNSPNVHERKPQSTVTSSLSVCHSVEPAEDYPCKICGKIFTKIKSRSAHMKSHRVQEESRRTFYSFEQPPYNMNT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00137472;
- 90% Identity
- iTF_00137883;
- 80% Identity
- iTF_00137472;