Agra022262.1
Basic Information
- Insect
- Aphodius granarius
- Gene Symbol
- RCOR3
- Assembly
- GCA_963971325.1
- Location
- OZ020226.1:12235365-12241200[+]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 2.6e-09 3.8e-06 27.7 0.0 3 46 131 174 129 174 0.97 2 3 0.91 1.3e+03 0.4 0.2 36 44 270 278 261 279 0.88 3 3 7.1e-15 1.1e-11 45.5 0.0 3 46 377 420 376 420 0.98
Sequence Information
- Coding Sequence
- ATGGTTTTAGCCGAGAAGAACAACGAAAACGCCAGGAATGGGCGCAGGAGCAGGGGGCCGAGCCCCAATGGACATGTCCAGCAAGAATCCACGAGCGAAGACGAAACCACAGTACCAGTGGATAAAATACGTGTGGGGCGCGACTATCAAGCTGTTTGCCCGGAACTGCAACCGGAGGTTTTACGTAAACCTGAAACACTAGCCGATAGGGCTCTTTTAGTTTGGTCTCCGACCGCAGACATTCCGGAAACTAAGCTGGAGGATTATATAGTCCTGGCTAAAGACAAGTATGGATATAATGGGGAACAAGCGTTGGGGATGCTTTTTTGGCATAAACATGATCTCGACAGAGCCGTGTTAGATTTGGCAAATTTTACCCCTTTTCCGGATGAGTGGTCCGTTGAAGATAAAGTACTATTCGAGCAGGCATTCCAGTTTCACGGGAAAAGCTTCCATAGGATACGACAGATGTTGCCTGATAAAAGTATTGCCAGCCTGGTTAAATACTACTATAGTTGGAAGAAGACTAGGTCTCGCACAAGCCTTATGGACAAGCAGGCAAAGAAATTGACACAGCCAAGAGAAGATGGGGCCCCCTCAGAGGCCGGTTCCGAGCCAGGTTCAAACGAGGAGTCCGATCACGACGATAAGAAGTGGACGATACACCGTGGTATACGGCGAAAGAGCGGGTCGCCTACTAGGGCTGGCCAAACGACCGATGAGTCCACGCAGGCTGTGGGTGGCACGTGTTCTAACTGTGGCGTCATCTGTACTGTCACTCAAGTGACACCGAAGGGGCACCTCTGTAACTCCTGCTATCTGCACTGGAGACGAACGGGATTGTTGAGGCCCACGTCGGGGCCTACGGGGGGCAAGCGCGGCGCTCCTTTAGGGGGGCGCCATAAGCGCAAGCCGCCACGCGGCATGTACATCAATCACGATGACTTGGCGGCGATGGCCACCGGAGGTGCAGGCGTACTTATGCTTAAGGCTATGGACAGGGAACGGGACGCCCTTCAGCGACAAATACAGCAGAACAAGCAATCGATCAGTTCGTTGAAACGAAAGCACTCCGATTCCATAGAGGACTTGCGCCCGGCTGGGGAAAACAATTCTCGTGTGAACGCGAGATGGACTAACGAGGAGTTGCTATTGGCCGTGCAGGGCGTCAGGAAGTACGGCAAGGACTTCAAGAGCATCGCAGAGGTGTTGGGCAACAAGACCGAACACCACGTCCGTTCGTTTTTCGTCAATTATCGCAAACGCTACAACCTTGACAGTGTTCTGAAGGACTTTGAAAAAGAAAACGGTCCCATTGTGGACGACGATATCAAGATGGAGGCGGACGAGAACACAGCTGAAAACAACGGGAGTACCGGCAGTGAAGTTATCTGTTTGTCGCCAACACCGCCGAAAAAGGAGTTGAAACCCAAAGTTGCCGCGGTTCCTGCTAGTAAATGA
- Protein Sequence
- MVLAEKNNENARNGRRSRGPSPNGHVQQESTSEDETTVPVDKIRVGRDYQAVCPELQPEVLRKPETLADRALLVWSPTADIPETKLEDYIVLAKDKYGYNGEQALGMLFWHKHDLDRAVLDLANFTPFPDEWSVEDKVLFEQAFQFHGKSFHRIRQMLPDKSIASLVKYYYSWKKTRSRTSLMDKQAKKLTQPREDGAPSEAGSEPGSNEESDHDDKKWTIHRGIRRKSGSPTRAGQTTDESTQAVGGTCSNCGVICTVTQVTPKGHLCNSCYLHWRRTGLLRPTSGPTGGKRGAPLGGRHKRKPPRGMYINHDDLAAMATGGAGVLMLKAMDRERDALQRQIQQNKQSISSLKRKHSDSIEDLRPAGENNSRVNARWTNEELLLAVQGVRKYGKDFKSIAEVLGNKTEHHVRSFFVNYRKRYNLDSVLKDFEKENGPIVDDDIKMEADENTAENNGSTGSEVICLSPTPPKKELKPKVAAVPASK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01257954;
- 90% Identity
- iTF_00980941;
- 80% Identity
- -