Agra025637.1
Basic Information
- Insect
- Aphodius granarius
- Gene Symbol
- kn
- Assembly
- GCA_963971325.1
- Location
- OZ020228.1:1808779-1817891[-]
Transcription Factor Domain
- TF Family
- COE
- Domain
- COE domain
- PFAM
- AnimalTFDB
- TF Group
- Helix-turn-helix
- Description
- This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.4e-42 9.4e-39 134.0 0.0 6 115 18 119 14 124 0.90
Sequence Information
- Coding Sequence
- ATGTTTGGGCTACACCATCATCAGGATGCTGCTGGTCTACACCATCATCACCAGCCTCGTGGGCCCAGTCTCAAGGAGGAACCGCTCACCACCACGAGGTCCTGGATGCAACCAGCTGTTCCAGACCAAAGCGGGATCGGAATCGGGGTTGGACGTGCTCACTTTGAAAAGCAACCCCCCAGCAACTTGCGGAAGTCCAACTTCTTTCATTTCGTTATCGCCCTTTATGATAGGGCCGGCCAACCAATCGAAATCGAAAGAACAGCCTTCATTGGATTCATTGAAAAGGACCAGGAAAGCGATGGTCAGAAGACGAACAACGGTATCCAGTATAGGCTGCAACTTCTTTACGCTAGTGTCTTCGGACTTTGGGGCCTGTGGGACTGCCGAGATCCCGTCTGGAGTTTACAAAACATCGGAAACCGCGACAAGCAAGTAGATTGTCTTGGCTTTTGTCCAGCCGCAAGGCTCTCGTGCTTGTTCCGTCAAGTATCAAGTTTGCGTGACCAAGTAAATTAA
- Protein Sequence
- MFGLHHHQDAAGLHHHHQPRGPSLKEEPLTTTRSWMQPAVPDQSGIGIGVGRAHFEKQPPSNLRKSNFFHFVIALYDRAGQPIEIERTAFIGFIEKDQESDGQKTNNGIQYRLQLLYASVFGLWGLWDCRDPVWSLQNIGNRDKQVDCLGFCPAARLSCLFRQVSSLRDQVN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00813504;
- 90% Identity
- -
- 80% Identity
- -