Agra025635.1
Basic Information
- Insect
- Aphodius granarius
- Gene Symbol
- kn
- Assembly
- GCA_963971325.1
- Location
- OZ020228.1:1774255-1780084[-]
Transcription Factor Domain
- TF Family
- COE
- Domain
- COE domain
- PFAM
- AnimalTFDB
- TF Group
- Helix-turn-helix
- Description
- This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 4.9e-149 3.2e-145 485.6 13.6 179 560 41 416 38 428 0.84
Sequence Information
- Coding Sequence
- ATGTTAATATTTGATGCTCCATTACGAGATCTCGGGGAGGAGGAGTTGTCTTCGCCTCAGATCTTGGGTCTCGGGAACTGGGGAAGAATATTTCGCTTAATCTTGGACTTAATAATGCACGTTATTGGGATattttttctgaaattcttCTTGAAGTGCAACCAAAACTGCCTGAAGAACGCCGGCAATCCAAGAGACATGAGAAGGTTTCAGGTTGTCATAGCTACGCAGGTATCTGTCGATGGGCCTCTACTGGCTATCTCGGACAATATGTTTGTTCATAACAACTCCAAGCACGGCAGAAGAGCGAAACGCCTTGAACCCAGCGAAGGTACTTATATAAACAGTCTGTATCCTCCCCTGCCAGTGGCAACACCCTGTATCAAGGCCATCAGTCCCAGTGAAGGATGGACCTCGGGTGGTTCCACTGTTGTGATAGTGGGTGACAACTTCTTCGATGGTTTGCAAGTCGTCTTCGGCACCATGCTCGTATGGAGTGAATTGATCACGCCCCATGCAATACGTGTCCAGACGCCTCCTCGACATATACCAGGAGTTGTCGAAGTGACGCTCTCCTACAAATCCAAACAATTCTGCAAAGGCTCCCCAGGGCGATTCGTCTATGTTTCGTTGAACGAACCAACAATCGACTACGGTTTCCAGAGGTTACAGAAGCTCATCCCCAGGCATCCTGGAGACCCAGAAAAGCTCCCAAAGGAGATCATCTTGAAAAGAGCAGCGGATCTTGCAGAAGCCCTGTATACGATGCCGAGGAATAATCAATTGTCTTTGGGAGCCCCGAGATCGCCGACGATGGCGAACAACGCCATGACGACCAGCTTCAACACGTACACGGGCCAACTCGCTGTCAGCGTGCAAGACGGCGGAAACGGTCAGTGGACAGAAGAGGAGTACGCCAGGGCGCAGAGCAGCAGCGTCTCGCCACGCGGAGGTGGCTATTGCTCGAGCGCCTCGACGCCGCACTCGTCTAACGGCGGCGGGTCTTACGTGGGcagcggaggcggcggcggcggaaaTATGAACGGATACGGAGGTGCAACACCTACTAGCTCCTCGCAGTTGTCGAACATGCTGCCCAGTTCGCCGTCGGCTGGTATATTCAACTCAACACCAATTTCACCGGAGGGTGGTCATTATCATTTTGGCGCTCAGTACCAACACCACGAACACAATAAGCCGGACAAAAGCGGGAAAAGCGCGTTCGCGCCGGTGGTAAGGGGTAGTCCCCCCGCGCCGGCCCTTTTCCACCAACAGCCCGTCACAGGTTGGCACCACTTGGCCGTTCAGTGttag
- Protein Sequence
- MLIFDAPLRDLGEEELSSPQILGLGNWGRIFRLILDLIMHVIGIFFLKFFLKCNQNCLKNAGNPRDMRRFQVVIATQVSVDGPLLAISDNMFVHNNSKHGRRAKRLEPSEGTYINSLYPPLPVATPCIKAISPSEGWTSGGSTVVIVGDNFFDGLQVVFGTMLVWSELITPHAIRVQTPPRHIPGVVEVTLSYKSKQFCKGSPGRFVYVSLNEPTIDYGFQRLQKLIPRHPGDPEKLPKEIILKRAADLAEALYTMPRNNQLSLGAPRSPTMANNAMTTSFNTYTGQLAVSVQDGGNGQWTEEEYARAQSSSVSPRGGGYCSSASTPHSSNGGGSYVGSGGGGGGNMNGYGGATPTSSSQLSNMLPSSPSAGIFNSTPISPEGGHYHFGAQYQHHEHNKPDKSGKSAFAPVVRGSPPAPALFHQQPVTGWHHLAVQC
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00429627;
- 90% Identity
- iTF_00137688;
- 80% Identity
- -