Basic Information

Insect: Aphis glycines
Gene Symbol: KPNB1_1
Assembly: GCA_009928515.1
Location: scaffold:1865700-1874896[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 0.0012 0.1 13.2 2.3 1 23 1077 1099 1077 1099 0.97

2 9 0.0014 0.12 13.0 0.4 1 23 1196 1219 1196 1219 0.95

3 9 0.00027 0.023 15.3 0.1 1 23 1253 1275 1253 1275 0.96

4 9 0.16 14 6.5 3.9 1 23 1418 1440 1418 1440 0.96

5 9 4.4e-05 0.0038 17.7 10.5 1 23 1446 1469 1446 1469 0.97

6 9 0.0015 0.13 12.9 1.1 1 23 1478 1501 1478 1501 0.97

7 9 6.6e-06 0.00056 20.3 1.8 1 21 1506 1526 1506 1528 0.94

8 9 0.031 2.6 8.8 2.0 1 23 1570 1592 1570 1592 0.97

9 9 0.00051 0.044 14.4 3.2 1 23 1597 1620 1597 1620 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	0.0012	0.1	13.2	2.3	1	23	1077	1099	1077	1099	0.97
2	9	0.0014	0.12	13.0	0.4	1	23	1196	1219	1196	1219	0.95
3	9	0.00027	0.023	15.3	0.1	1	23	1253	1275	1253	1275	0.96
4	9	0.16	14	6.5	3.9	1	23	1418	1440	1418	1440	0.96
5	9	4.4e-05	0.0038	17.7	10.5	1	23	1446	1469	1446	1469	0.97
6	9	0.0015	0.13	12.9	1.1	1	23	1478	1501	1478	1501	0.97
7	9	6.6e-06	0.00056	20.3	1.8	1	21	1506	1526	1506	1528	0.94
8	9	0.031	2.6	8.8	2.0	1	23	1570	1592	1570	1592	0.97
9	9	0.00051	0.044	14.4	3.2	1	23	1597	1620	1597	1620	0.97

Sequence Information

Coding Sequence: ATGAGTGATGAAGAAGTTGTTCAAATTACCAGCCTTTTAGAGCGCACGATTTCCACCGACAAAGAAGAATTAAATCAAATACAGAAATTCCTCGAGCATGCAGCGCAAACGAATCTCCCAGGTTTTCTCAAAACTTTATCTAATGTCTTACTTTATTCCGTCAATAACCCGGTTGCTCGAATCGCCGCCGGCCTTCAGATCAAAAATCACATTACATCAAAAGATGAAGCAGTTAAGGTTCAGATGAAACAGCGTTGGTTGTCTTTCACTGAACAAGACCGTCTTTTTATTAAAGAAAACATTTTTAAAGCACTTGGCACGGAAAGTCGGCCTAGTTCCGCTGCTCAGTGCGTTGCCAATGTTGCTATTATTGAGTTACCACTAAACCTTTGGCCAGGTCTTATTGCCTTGTTAGCAGCAAACGTCACTGATCCAAATTCATCAGACGTTCTTAGAGAGTCTTCTCTAGAAACTATCGGTTATATATGTGCCGAGACCGATCGTGATGTTTTAAAGGCAGAGTCAAATACAGTTCTGACGGCCATTGTTCATGGAATGACCCAACCAAATAGCCATGTTTGTCTGGCTGCCACTACTGCTCTTTATAATTCTTTAGAATTTACAAAAGGAAATTTCGAAAAGAAAAATGAACGTGATTACATAATGGAAGTAGTGTGTAAGGCTACTCAATCAACTGAAACTCAAATTAAGGTTGCTGCACTTCAATGTCTTGTTAAAATTGTCTCTTTATATTATGAGTATATGGAAAATTATATGACAACACTATTTCCAATTACACTACATGCTATTAAATCAGATTTGGATGAAGAAGCTTTACAAGGTATTGAATTTTGGTCTAGCATTGCCGAAGAAGAAGCTGAAATTGTTTATGAAAGACAATGCCAAGAACAACCTAATGAAAAAAAACTTATGTTGTACGCTGAAGGTGCATTAGAATTCATAATACCGGTTTTAATGGAAAAACTTACCAAACAAGAAGAAGGTGATGATGATGATGATTGGAATCCGTGTAAATCAGCTGGTGTTTGTATAATGTTGTTAGCAACTTGTTGCCAAAGCAATATTGTGCCACATGTAATTCCATTCATAAATGCTAATATCAGCAATCCAGATTGGCGTTTTAGAGATGCTTCAGTCATGACACTTGGATCGATTCTTGGCGGTCTAGATCAAGCTGCATTAAAAAGCCTATTAGAACCTAACATTCCTGTTCTTATACATTTGATGTATGATTCTAGCGTGGCAGTTCAAGATACATCTGCGTGGACATTTGGCCGCATATTTGAGTTTGTACCTGATTTAATCATTAATTCTCCTTGTTTAAATGATGTACTTGGAGTGTTTATTAAAGGTCTTAAATCTGAACCACGTGTTGCCACTAACATTTGCTGGGCTTTTAGCAGTCTAGCACAAGCCACTGGAGAAGACATGAATGTCTTGACTCCATATTTTGATTACATTGTTCAAGGCCTACTTGAAACCACAGAAAGAGGTGATGGTATGAGATCAAATTTGAGATCAGCTGCATATGAAGCTCTTATGGATATGATTAAATGTTCGCCAGCTGATTGTTATGAAACTGTTAAAAGTACAACTTTAATCGTACTTAGTCGCTTGAACCAAATAATCAATTTACAATCTATGAATGAAGATTGTTTGGATATGCAAGGACTGTTATGTGCAACATTACAAAGTGTTATAAGAAAAATGAGTGGTGAAGATGTAGAAAAAATTGCTGATGCCATAATGAATGCTCTTTTAGTAATGTTGAGTACTAGCAAAGATAGTGGTTTGCAAGAAGATGCATTAATGGCTATAAGTCCTCTGATAGAAAATATTGGAAAAGGATTTAATAAGTATATGGAATATTTCAAAACATACTTATTTATTGGCTTACAGAATAATATGGAATTCCAAGTGTGTTTAGCTGCTATTGGTTTGGTAGGTGATTTGTCACGTGCTCTTCGTGAAGATTTAGCCCCATATTGTGATCAAATTTTCGCTTTACTTTTTGAAACATTGAGCAATAATACTGTTAACCGTAATTTAAAACCACAAATTTTGTCTTCATTTGGAGATATAGCTCTTGGCATTGGTTCAGAATTTAAAAAGTACCTAGATCATGTTTTAAATGCTTTAGTTCAAGTAGCACAACTTCAGTTGGATCCCAATGATGCAGAAATTGTTGAATACTTAAATGAACTTCGTGAAGGTGTGTTGGCTGCTTATATTGGTATTGTACAAGGACTGAAAGGTGAAGGATATACTCCCAATCAAGATGTTTACTTATTAGAAGCACACTTACCATTCATGGTTCGGTATATGATTTCTATTTGTTCTGATCCCAATGCACATCCAGGAATATTAAAAAGTTGCTGCGGTCTTGTCGGAGACTTGTGCACAGCTTTTGGTGCTAAAGCATGTCCGGTTCTAGACAATGGAGAAGTACATGAACTTCTATACAAAGGACGTCAATCCACAGATGTTACTGCCAAAAGTTTAGCCCGTTGGTCTGCGAAAGAACTTCAAAAAATCAAGACCTTTGCAATTAAAAGGATCAGTTTAAATGCTGTTTCAAAAATGACTGAGGTTGACTATCGTTATATAGCGTTTGAAAATGATCATACATATTTGAAAACTACAAATAATAGTGATGTAAATTGTCAATTGTTACAGACCAGCATTTCTACAGTTGAACCCAAACATGATGTGGCTGTTTCATCAAAAACTCAACTAACTAGAAAACAACAAAATAAATTTGATATAAATAAAACTACACAGTGTAACGTCGATTCAGATGTACAAAACTCAAATGTATTTTTACTTCGTGATACTTTGGATTTTCCATTATCTACAGACTTAACAATATTAAAAAATAAATTTGCTTTTAAAAAAATTATTATTGATAACAATTCAAGTACAAGACCCATACAACCAAAACTGAAGAGCACTTCAAACATTGTTCCCACTACACAAACACAATCAAGTGCACAACTTATTTCATCTCAAATTAATCCTTTAAAAACAAATTTACAAAACATAACATCAAAAAACACTTCTGCAAAACCCAATAAACAACAATTGAAACCTTTTATTAAACCTATTAAGTCCATTAAAAACAAAATTGTTTATGATTATAAAAACAATACATGTACTATTGAATTAGCCACTAATTTATGCCAGCGTTTATTGAGTGGTGAGAATATATTCATGTGTAGAAAATGTGATAAAATTTTCACAGAACATAAAGATTTGTTAGATCATTATATGATTCATAATAAATGTAAAACAACAAATCTAATACTTCAAGAAAAAGATCAAAGAGAATCCATACCAATTGATAATGTAAAGAAAGAAAATAAAGATGTCGATAAAAAAATTATTAATAATGATAAAAATATTTCCAAACAAACTATACCAGTTATTAAATCTGCATTAAACTCTAAAAAAAATAAAGTTATTTTTCAAGGAGAGTGTATTATGTGTCATTCAGTTTTTCCAGATCTTGGAGAACATATAAGGACTGTTCACCATAGTGATTTGACTAGAAATAAAGTTAATATTCACCGCTGTACAATTTGTGGTATGGAGTTTGATATTAAACAACAACTACGGGCCCATGAGTTGTCTGCACATAAATCTACTAATACACATACTTGTGAACATTGTCTTAAATATTTCTTGTGTAAGGAAGACTTAGAAACACATGTTGAATCTCATTGTGGTGACATGAAGTATTTATGTCCATATTGTGATGCTGGTTTTCCTAATTCCAATGGATTAAGAACTCATCTTATTAGTCATATTGGGTTTGATAGTCCTGAATACTCAACTTCAGAAACACCAGTTAATCAAATTGAATATAGTCCTACAAGACCACCTGAACAATTTGATCACTTGTTTTCTGAGTTAGATAATGTCTCAGAAGATGGTGACAATGTTTATATAGAACAAGTTGATGATAATAATTATCAAGTCAGTTTTTTTAAGGACAATGAGGATAATGCATCATCACAAATAGACTTGCTTACTGATGATGGCTACGAAATTGATACAGAACTAAATAATATACCTTCAGAAGATAATAACAAAGTTATCACTAATGAACAGCAAGCATCATTATTAAATAAAAAGCGAATAAGTTATACAGTGTGTAGAATATGCTTGAATATTGTAAGTTATTCAAGAATTGGTAGACATATGAAGAAAAAACACAATAATGCTGCTCCGTACCAGTGTGAGATTTGTCATGCTGAGTTTAATCGAAAACACATCATGGATGACCATAGAAGAAAACATACAAATAATAAACCTCACAAGTGTACAGAATGTTCTAAATGTTTTACCTATAAACATCATCTAAATAGGCATATGATGATAGTTCATAATTCTGATACATTAGAAAAAGTATTCAAATGTTCTATATGTGATAAAGCATTTTTATTTAAAGAATATTTAACACTCCATGTCAATAGCCGCCATAAGGGTAAACATTATATGTGTCAAGTTTGCGGCAAGAGTTTTTCTACTAATGCTGCGCTGAATAAACACCAATTATGCCATACAGACGAACGACCATTCATGTGTGAACATTGTGGACGGACTTTCAAATGTAAAACTCATTGTGATACTCACAAAAAAAATATGCATCCTGGAGATCATGAATTAACAGTACCACAAGAAAAATTTGAATGTGAACTTTGTAAAAAACTATTTAGCACAAAAGTATATCGTGATATGCACCTTAAGCGACACAATGGTCAAGGCCATCAATGTGATGTATGTTACAAACTATTTGTTTCCAAAGCACATATGCAAAGGCATATTAAAATAATGCATCGAAATACATAG
Protein Sequence: MSDEEVVQITSLLERTISTDKEELNQIQKFLEHAAQTNLPGFLKTLSNVLLYSVNNPVARIAAGLQIKNHITSKDEAVKVQMKQRWLSFTEQDRLFIKENIFKALGTESRPSSAAQCVANVAIIELPLNLWPGLIALLAANVTDPNSSDVLRESSLETIGYICAETDRDVLKAESNTVLTAIVHGMTQPNSHVCLAATTALYNSLEFTKGNFEKKNERDYIMEVVCKATQSTETQIKVAALQCLVKIVSLYYEYMENYMTTLFPITLHAIKSDLDEEALQGIEFWSSIAEEEAEIVYERQCQEQPNEKKLMLYAEGALEFIIPVLMEKLTKQEEGDDDDDWNPCKSAGVCIMLLATCCQSNIVPHVIPFINANISNPDWRFRDASVMTLGSILGGLDQAALKSLLEPNIPVLIHLMYDSSVAVQDTSAWTFGRIFEFVPDLIINSPCLNDVLGVFIKGLKSEPRVATNICWAFSSLAQATGEDMNVLTPYFDYIVQGLLETTERGDGMRSNLRSAAYEALMDMIKCSPADCYETVKSTTLIVLSRLNQIINLQSMNEDCLDMQGLLCATLQSVIRKMSGEDVEKIADAIMNALLVMLSTSKDSGLQEDALMAISPLIENIGKGFNKYMEYFKTYLFIGLQNNMEFQVCLAAIGLVGDLSRALREDLAPYCDQIFALLFETLSNNTVNRNLKPQILSSFGDIALGIGSEFKKYLDHVLNALVQVAQLQLDPNDAEIVEYLNELREGVLAAYIGIVQGLKGEGYTPNQDVYLLEAHLPFMVRYMISICSDPNAHPGILKSCCGLVGDLCTAFGAKACPVLDNGEVHELLYKGRQSTDVTAKSLARWSAKELQKIKTFAIKRISLNAVSKMTEVDYRYIAFENDHTYLKTTNNSDVNCQLLQTSISTVEPKHDVAVSSKTQLTRKQQNKFDINKTTQCNVDSDVQNSNVFLLRDTLDFPLSTDLTILKNKFAFKKIIIDNNSSTRPIQPKLKSTSNIVPTTQTQSSAQLISSQINPLKTNLQNITSKNTSAKPNKQQLKPFIKPIKSIKNKIVYDYKNNTCTIELATNLCQRLLSGENIFMCRKCDKIFTEHKDLLDHYMIHNKCKTTNLILQEKDQRESIPIDNVKKENKDVDKKIINNDKNISKQTIPVIKSALNSKKNKVIFQGECIMCHSVFPDLGEHIRTVHHSDLTRNKVNIHRCTICGMEFDIKQQLRAHELSAHKSTNTHTCEHCLKYFLCKEDLETHVESHCGDMKYLCPYCDAGFPNSNGLRTHLISHIGFDSPEYSTSETPVNQIEYSPTRPPEQFDHLFSELDNVSEDGDNVYIEQVDDNNYQVSFFKDNEDNASSQIDLLTDDGYEIDTELNNIPSEDNNKVITNEQQASLLNKKRISYTVCRICLNIVSYSRIGRHMKKKHNNAAPYQCEICHAEFNRKHIMDDHRRKHTNNKPHKCTECSKCFTYKHHLNRHMMIVHNSDTLEKVFKCSICDKAFLFKEYLTLHVNSRHKGKHYMCQVCGKSFSTNAALNKHQLCHTDERPFMCEHCGRTFKCKTHCDTHKKNMHPGDHELTVPQEKFECELCKKLFSTKVYRDMHLKRHNGQGHQCDVCYKLFVSKAHMQRHIKIMHRNT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -