Agly008908.1
Basic Information
- Insect
- Aphis glycines
- Gene Symbol
- Kmt5c
- Assembly
- GCA_009928515.1
- Location
- scaffold:19712-23009[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2.2e-09 2.2e-06 27.4 0.0 5 39 245 279 243 284 0.88
Sequence Information
- Coding Sequence
- ATGTTCGAGGAGGACGGCGATGTTGGTGCAAAGGTAATGGCCGCAAAGCATTTAAAGAGTGGCACTGTGATTAGGGAACTGTGTGGTAGGCTGGTGACGGTTAGAGAACCATTCCTGAAGCCTGGGCGAAATGATTTTTCTGTCGTCCACAGCAACTTCATCAAGAAGTCACAGTTATGGTTGGGTCCAGCTGCTTACGCAAACCACGATTGCGAAAACAATTATGAAATTCATTATTTAAGGAGCGGTGTGGCGTGCCTTCGTACCAACAGGCCAATTCCAGTCGGTGAGGAGATCACGGCTTTTTACGGGGATCAATATTTTGGTGAAAATAATGTGCATTGCCTTTGCACGACTTGCAAAGAAAAAGTGGAAGGTGCGTATGCCAATACTGAACCTTCACTAGTAGAAAAACAGTTTCTCCAATGTTCCCATTGCCCTGCGAGGTTCCGATTTAAATCGTGGTTGGTGCGGCATCTTTCGAGGCACGGGCAAATCGATAAGTTTGCATGTTGGGAATGCGGTGAGTCCTTCAGCAGGAAATCGTCGTTGAAGAGGCACGCCAAAGGACACGATACCGAATTGACAAAATTTCAATGCACGCTATGTCGAAAGTCTTTCACGCGGAAAGAAGATGCCACCACCACGAGAACACCGTCCACCTTACATTTGGCTCGCACACCAAAAAGAAAATTAGGCAGTAGGCAATACAAAAGTTATTCAATCGAATGTTTAAATGAAGCAATAACCAAAATTGCTAATGGTGATCTTTCCATTCTTGCTGCCAGCAAATTGTATAATATTTCTTATGGAACTTTACATAACAAGTATAATGGGAATCATATTAAAAAAACTGGATCTCCAACAGTATTCAGTGATAAAGATGAAATGGCATTTTTAACAGCGGCAATAAAATGTGGACAATGGGGTTTTCCACCAACATTGATGGACCTTAGGTTAATTGCAAAGTTATTTTTGGATTCAAAAGGTATTATGGTCGAAAAGTTTTCAAACAACTTGCCAGGTAGAGATTGGGCACAAAGTATGTTAAACCGACATAATAATTTGGCATGCCAACGTGTTGCAACCAACATTGCGCGTAATCGTGCAGAAGTTTCTCCAGAAATAATTTCTGAATATTTTGACAATTTACAAAAAGTGATTGAAAATGTTTCTGCTCAAAATATATACAATTATGATGAAAGTAACTTGCAAGATAACCCAGGAAAACTCAAAATGATTTTTCAACGAGGAACAAAATATTCAGAGCGCATTCAAAACCATTCTAAGTCCGCTACTTCCATTATGGTTTGTGGTTCAGCTGCTGGAGTACTTTTGCCACCATACATTATATTCAAAGCTAGTGAAATGTGGCAACCATGGACAGTAGGTGGACCAAAAGGCCAACCATGTTGTTCAGAACCTTGCTGTTCAAAAGGGTCTCGCTTTAATCGTACAGCTCATGGCTGGATTGATGGAATAACTTTTAAAGATTGGTTCTTACAAGTTTTTTGCTTCATGCAAAATCTCAAGAGGGTAATTGGAGACAACCTTTCTAGCCATATTCAACCTGAAATTTTTTATCTATGTGAACAAAATAATATTGATTTTGTCTGTCTTCCAAAAAATTCAACCCATCTTACACAGCCTCTGGATGTTGGGTTTTTCAGACCTTTAAAGCAGGAATGGAGAAATTGTTTAAATGAATGGAAAAATCAAAATACCAGATTAAAAGCTATCCTAAAATCATCTTTTCCAACACTAGTACGCATGACTATATAA
- Protein Sequence
- MFEEDGDVGAKVMAAKHLKSGTVIRELCGRLVTVREPFLKPGRNDFSVVHSNFIKKSQLWLGPAAYANHDCENNYEIHYLRSGVACLRTNRPIPVGEEITAFYGDQYFGENNVHCLCTTCKEKVEGAYANTEPSLVEKQFLQCSHCPARFRFKSWLVRHLSRHGQIDKFACWECGESFSRKSSLKRHAKGHDTELTKFQCTLCRKSFTRKEDATTTRTPSTLHLARTPKRKLGSRQYKSYSIECLNEAITKIANGDLSILAASKLYNISYGTLHNKYNGNHIKKTGSPTVFSDKDEMAFLTAAIKCGQWGFPPTLMDLRLIAKLFLDSKGIMVEKFSNNLPGRDWAQSMLNRHNNLACQRVATNIARNRAEVSPEIISEYFDNLQKVIENVSAQNIYNYDESNLQDNPGKLKMIFQRGTKYSERIQNHSKSATSIMVCGSAAGVLLPPYIIFKASEMWQPWTVGGPKGQPCCSEPCCSKGSRFNRTAHGWIDGITFKDWFLQVFCFMQNLKRVIGDNLSSHIQPEIFYLCEQNNIDFVCLPKNSTHLTQPLDVGFFRPLKQEWRNCLNEWKNQNTRLKAILKSSFPTLVRMTI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00135761;
- 90% Identity
- iTF_00135761;
- 80% Identity
- iTF_00135761;