Agly001531.1
Basic Information
- Insect
- Aphis glycines
- Gene Symbol
- Kdm5
- Assembly
- GCA_009928515.1
- Location
- scaffold:655952-658162[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 4.7e-19 7.6e-16 58.4 0.2 2 69 114 185 113 206 0.82
Sequence Information
- Coding Sequence
- ATGAGTGTGAAGAGAGAAATAAAGTGTGAACTTGAAATTGATGAACCAAACCAAAAAGAATGTCCTGAAGGAAAATTTATTGATCCTGTCAGTCTTATGGAAAACGGAAAATTCATTTTCAACGCTCCACCGGAAGCTCCAGTTTTTGAACCTACTGCAGAGGAATTTAAAGATCCGTTGAAATATATATCTAAAATTAGAAGTGTAGCACAAAAATATGGCATCTGTAAAATTAGACCACCATCTAATTGGAATCCTCCGTTTTGTGTTGATGTTGATAAATTTAAATTTACACCAATAATTCAAAAACTTAATGAACAAGATGCAATTACTAGAGTTAAACTCAATTTCTTGGAAAAAATTGCCAAATATTGGCATTTACAAGGCATCAGTTTTAAAATACCAGTATTAGAACAAAGGGCTGTAGATTTATATTCTCTTTATAAAATTGTAGAATTTGAAGGAGGTTTCGATGAAGTATGTTCAAAGAAAAAATGGGAAAAAGTGGCTAGTCGTATGGTTATCGACGCTTTTGGATTTCAACCAGCTCAGCGTCAATACACACTTCAACAATTTGGAGAAATGGCAGACAAATTTAAATCTAAATATTTTAATATGCCAGTTCATCTTGTACCTACAGACAAAGTTGAACAGGAGTATTGGAAAATTGTTTCATCTATTGATTCAACAGTAAAAGCAGAATATGGTGCTGACATACATACTATGGATCATGGATCAGGATTCCCTACAGGTCTTGCTCTAAGTGGAAACGAAGATAATACTTTTTACAAGTCATACGTAGAAGATCATTGGAATTTAAATAATTTACCAATACTTAAAGACTCAGTTTTTAGTTTTATTAATGCAGATTTATCTGGTATAAAAGTTCCATGGATGTATGTTGGTATGTGTTTTTCAACATTTTGTTGGCATAACGAAGATCATTGGAGCTACTCGATCAATTATTCACATTGGGGTGAACCTAAAACATGGTATGGAATTCCAGGAGCCTCTGCTGAAGCCTTTGAAGAAGTTATGAAGGACACAGCACCAGAATTATTTCATTCGCAGCCAGATCTCTTACATCAGTTGGTTACTATTTTGAATCCGAATATATTGATGAAAGCAAATATCCCAGTCTATAGAACTGATCAAAATGCTGGAGAATTTGTTGTTATTTTTCCAAGATCTTATCATGCTGGGTTTAATCAAGGATTTAATTTTGCTGAATCTGTGAATTTTGCACCTGCTGATTGGATTTCAATAGGTCGTGAATGTGTTAACTATTATTCTTCTATCAAACGAATATGTGTATTTTCCCATGATGAACTTTTATTTAAAATACTGAAATCTTGTGATGACTTGACACCAAAAACAGCTGCATTAGTATATGCTGATTTTAAGGAAATGATCAAGTTTGAACGGGTTCATGGTACAGCACTTTTTGATTGGGGTGTTACTAAAGCAGATTTTGTTAAATTTGAACATCAAGAAGATGACCTTAGACAATGTATTATTTGTAATACCACTTTGTTTCTATCTGCCGTATCTTGTATGTGTGATCAAAAAAGACTGGCATGTCTTCGACATTTTAAACAACTTTGTGATTGTCCTGCACAAATGCATGTGTTCAAATATAGGTATACCAGTGATGAGTTTCAACCACTAGTGCGAAAGGTTAAAGCTATAGCTGAAACGGCTCATAATGATTGA
- Protein Sequence
- MSVKREIKCELEIDEPNQKECPEGKFIDPVSLMENGKFIFNAPPEAPVFEPTAEEFKDPLKYISKIRSVAQKYGICKIRPPSNWNPPFCVDVDKFKFTPIIQKLNEQDAITRVKLNFLEKIAKYWHLQGISFKIPVLEQRAVDLYSLYKIVEFEGGFDEVCSKKKWEKVASRMVIDAFGFQPAQRQYTLQQFGEMADKFKSKYFNMPVHLVPTDKVEQEYWKIVSSIDSTVKAEYGADIHTMDHGSGFPTGLALSGNEDNTFYKSYVEDHWNLNNLPILKDSVFSFINADLSGIKVPWMYVGMCFSTFCWHNEDHWSYSINYSHWGEPKTWYGIPGASAEAFEEVMKDTAPELFHSQPDLLHQLVTILNPNILMKANIPVYRTDQNAGEFVVIFPRSYHAGFNQGFNFAESVNFAPADWISIGRECVNYYSSIKRICVFSHDELLFKILKSCDDLTPKTAALVYADFKEMIKFERVHGTALFDWGVTKADFVKFEHQEDDLRQCIICNTTLFLSAVSCMCDQKRLACLRHFKQLCDCPAQMHVFKYRYTSDEFQPLVRKVKAIAETAHND
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -