Acrc028379.1
Basic Information
- Insect
- Aphis craccivora
- Gene Symbol
- kn
- Assembly
- GCA_009835225.1
- Location
- VUJU01000087.1:52564-57707[+]
Transcription Factor Domain
- TF Family
- COE
- Domain
- COE domain
- PFAM
- AnimalTFDB
- TF Group
- Helix-turn-helix
- Description
- This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2.1e-15 2.1e-11 43.6 0.0 134 160 114 140 100 157 0.85
Sequence Information
- Coding Sequence
- atgtGGCTCGGACCCGGAGGCGGTGGCGGGGCCCGCGACGGAGATGTGCACGCGATAATGCCAATGCGAATTACAAACGCGCTTATCTATCCGTTTCGCGTTGCCAAGTGGCGCGCGCCCGttcacgtacgacgacgacgacgacttaCTGCGACGCGCACGCTTTCTAGCCCACACTCTCGCGACACGAcggcATGGTATTTATTGGTCTACCGCAAAAAGGGCGGGTGCGGCCGAGTAAATCCTGCAGCGGCGAGTGAGGTGGCGCACAGCAGCACAAAGCCCGGGAACCGTATACaggACGTCGATCCCCCTCGCGTGCGCGCCTGGCCGCCGGAGAgaGCCATCATTTACGAGGGTCAAGACAAAAATCCTGAGATGTGCCGGGTGCTGCTAACGCACGAAGTCATGTGCAGACCAAAGGGGGCCAAAACCCCGGGGGACAGGTGCGGCGTAATAATAGTTCGTTCTACGAACATGTCatTCGATGCTGTGATAAGAAAAGTTGCGGCAATAGAAACGAAACGCCATCCGATCCGGTCATCATCGACAGcacttagaaaaaaaatcattcgtTTCTGTTATGCTCTCTCCCCCAATACTTTTATAACGGAATGGTTTAAATACCACAAAGAGATCCGCACACTAATAAGCCGTCCCAGCGGGTGGGGTGCTTTGAACAAACTTCTGCTCTTTCGCCTTTTATCTAACGTTGTCCTCCCCCAGAACCAATTAAAACACCACAAGCGCCcggtatttttgttttatgtaatcGGTAGAACGAAAAAAGACAAATATTGTACGATATCCcgctataaaaacataattagtgATTGA
- Protein Sequence
- MWLGPGGGGGARDGDVHAIMPMRITNALIYPFRVAKWRAPVHVRRRRRLTATRTLSSPHSRDTTAWYLLVYRKKGGCGRVNPAAASEVAHSSTKPGNRIQDVDPPRVRAWPPERAIIYEGQDKNPEMCRVLLTHEVMCRPKGAKTPGDRCGVIIVRSTNMSFDAVIRKVAAIETKRHPIRSSSTALRKKIIRFCYALSPNTFITEWFKYHKEIRTLISRPSGWGALNKLLLFRLLSNVVLPQNQLKHHKRPVFLFYVIGRTKKDKYCTISRYKNIISD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -