Aaph010525.1
Basic Information
- Insect
- Aphidoletes aphidimyza
- Gene Symbol
- NFXL2
- Assembly
- GCA_030463065.1
- Location
- CM059998.1:16847688-16855704[-]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 11 2 2e+04 -7.1 5.6 15 19 196 200 195 200 0.81 2 11 0.031 3.1e+02 1.7 0.2 4 10 231 237 230 238 0.96 3 11 1.3e-07 0.0012 18.9 13.9 1 18 248 264 248 265 0.94 4 11 1.4e-06 0.013 15.6 12.2 1 19 301 318 301 318 0.96 5 11 0.53 5.2e+03 -2.3 1.5 6 10 343 347 342 347 0.89 6 11 8.8e-09 8.7e-05 22.6 14.0 1 19 353 371 353 371 0.99 7 11 0.59 5.8e+03 -2.4 0.9 1 8 396 402 395 403 0.62 8 11 6e-07 0.0059 16.7 14.3 1 18 406 423 406 424 0.97 9 11 2 2e+04 -4.4 1.4 6 10 448 452 448 452 0.92 10 11 3.7e-06 0.036 14.2 14.8 1 18 458 475 458 476 0.94 11 11 3e-07 0.003 17.7 18.3 1 18 485 502 485 503 0.97
Sequence Information
- Coding Sequence
- ATGTCGACgttccagaaaaaaaataagaaaaaaaaatcacaatctTCACACCATGGTGAATCAAACGGTTCATTTCTTCCAATGAAACCGTCACATCGATGGGTTAGAGatgaaagcaataaaaaaatcgaagttAACGACTTGAGAAAAGCAGCTGATGAGCAGAAGAACGCTGCTAAAGAAAAATTCAAGGAAATACAATCAGAACATTTACAGGCGGCAAAAAAATATACTCAAAACTATGAAAGCAGTTCAGACGAGGAAGATCTAGAAAGTGACACAATTCTTGAAGCAGCCTTCAGAGGTTATGTTGGTGATAGGAGCCAATTACAAAAAACTCAAGAGTTACTTGAACATGTTTTCCAATCTGGAAGTACCTCATGTTTGATTTGTATCGGCAATGTCAAACACGCGGATCATATTTGGTCCTGCGAAAACTGCTTtagttttttccatttgaattgtctAAAAAAATGGGCGAAGGACAGCATATCacagcaaaaaacaaatcaagatGATAACGGTGGATATTATACAAACCGAGGCGAGTACGTTCCAAAACAAGTTAAGACCATCAAATGGTGCTGTCCCAAGTGTCGAACCGATTACCTTCCATCTGAAATTCCGCAAAACTACACCTGTTTTTGCCAGAAGGAAGTGATGCCAAAAAATCACCTTTGGTTGATACCCCACTCGTGCGGTGAAGTTTGTggaaaaccattaaaatcgcaACATGGCTCTTGTTCCCATCGATGTACGATCCTTTGTCATCCTGGCCCTTGTCCACCTTGTGCTCAGATCATCTCCACTTCGTGTGAGTGTAACAAATCCCATTTACGAACGATTCGCTGTACTCACAAATCTTGGAAATGCGGAAATAAATGTTCAAAAATTCTTCCTTGTGGTATACACACTTGCAATGAAATTTGTCACCTGGAATGTCCACCGTGCACCAAAAAAAGTAATCGATTATGTAGATGTggtaataaaacaatggaGCGGGATTGCAGTAACTTGATTTGGTCGTGTGAAAAAAcatgcaataaattgtttgaatgcggAAGACATCGGTGTAAGGTTAAGTGTCACAGTGGAGATTGCGGTGATTGTCCCTATGGATTATTACGATCATGTCCTTGCGGAAAAGAGACAACACAAGCTCCATGTTCTGAGGAAATTCAACCTTGTGGAAACACGTGTCAGAAAACTCTCAAATGCGGTAATCATATTTGTGCTGAACGATGTCATAGAGGTGAATGTGGCCACTGTTtagaaatgattgaaaagCCATGTCGTTGTGGTCTAAGGAGTAAGGAGTTACCTTGCAGCAAAGTATTTCTATGtgaagcaaaatgcaaaaatgtgcGAGACTGCAATAAACATGCATGTAACCGAAAGTGCTGCGATGGAAACTGTCCACCTTGTGATAAAATATGTGGAAAGGTGCTGTCTTGTGGGAAACATAAATGTTCATCTTGTTGCCATAATGGACAATGCTACCCTTGTAACATGAAAGCGACTGTTAAATGCCGGTAA
- Protein Sequence
- MSTFQKKNKKKKSQSSHHGESNGSFLPMKPSHRWVRDESNKKIEVNDLRKAADEQKNAAKEKFKEIQSEHLQAAKKYTQNYESSSDEEDLESDTILEAAFRGYVGDRSQLQKTQELLEHVFQSGSTSCLICIGNVKHADHIWSCENCFSFFHLNCLKKWAKDSISQQKTNQDDNGGYYTNRGEYVPKQVKTIKWCCPKCRTDYLPSEIPQNYTCFCQKEVMPKNHLWLIPHSCGEVCGKPLKSQHGSCSHRCTILCHPGPCPPCAQIISTSCECNKSHLRTIRCTHKSWKCGNKCSKILPCGIHTCNEICHLECPPCTKKSNRLCRCGNKTMERDCSNLIWSCEKTCNKLFECGRHRCKVKCHSGDCGDCPYGLLRSCPCGKETTQAPCSEEIQPCGNTCQKTLKCGNHICAERCHRGECGHCLEMIEKPCRCGLRSKELPCSKVFLCEAKCKNVRDCNKHACNRKCCDGNCPPCDKICGKVLSCGKHKCSSCCHNGQCYPCNMKATVKCR
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -