Aaph002044.1
Basic Information
- Insect
- Aphidoletes aphidimyza
- Gene Symbol
- stc
- Assembly
- GCA_030463065.1
- Location
- CM059996.1:24653617-24657314[+]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 15 1.5 1.4e+04 -3.7 1.1 15 18 393 396 392 397 0.81 2 15 0.16 1.6e+03 -0.6 0.2 4 10 453 459 452 459 0.94 3 15 7.3e-05 0.72 10.1 19.0 4 19 469 484 467 484 0.93 4 15 1.7e-06 0.016 15.3 12.0 3 19 522 538 513 538 0.87 5 15 4.8e-10 4.7e-06 26.6 13.3 1 18 578 595 578 596 0.97 6 15 4.2e-05 0.41 10.9 12.3 4 18 644 658 637 659 0.86 7 15 2 2e+04 -4.1 1.6 5 10 688 693 688 693 0.91 8 15 0.0071 70 3.7 9.3 1 11 699 709 699 710 0.96 9 15 0.91 9e+03 -3.0 0.8 4 10 714 720 713 720 0.86 10 15 7.9e-10 7.8e-06 25.9 12.3 1 18 726 743 726 744 0.97 11 15 1.2 1.2e+04 -3.5 0.5 6 10 773 777 772 778 0.70 12 15 0.51 5e+03 -2.2 9.1 10 18 791 800 780 801 0.89 13 15 1.8e-07 0.0018 18.4 12.3 1 16 837 852 837 863 0.92 14 15 0.27 2.7e+03 -1.3 9.8 4 18 871 888 869 889 0.79 15 15 0.48 4.7e+03 -2.1 0.1 8 12 905 909 904 909 0.80
Sequence Information
- Coding Sequence
- ATGGCAAATTACAATAATCACGATCGAAATAAAGGTGGCTACTTCGATCaatatgtgaattttgatcagTTTCTCATGCAACACAACATGAACAACCGGTCACCGTTGCGTGGCCCACAATCAGGCAATGGTTTTATGTCACCCAATTCGGAACCTGGTAACAGTAATTCATCATTCCATTCGCCCAATGCACCAAAcggtgcattttattttcaatcacaatCTGCCGCGACCAGTGGTTTCGGCCCACAAAATTGGGtacaaaattcgaatttaacCGCCACAGCAACCGAATTTATACCTCAACAAGCATCAAGCGCATCGAATAGTACGTCATTGCTTGCCACTGCAAGTGAATTTATACCAAGAAATTTACATGGGCTTGATAGGCCATCAAAAGAATTTCCCAGCAATGCAAAAAAGCAAACCGATACTGTCTCATGTGATAAGGGTAAAAATGTTACTGATGATAATGCATCAAAAACTGAATCCGTGATACAAGCTTTAAGCAACACTCACATCTCTGAGGAAAAAAGCAACGAACCGAAGGCATTGAACAGCAGTGGTGGAGCCATTAAAAAGGTTCGTAGCCAGGATTATCGCAATGATCGAAGTGATCGAAATGAACGGATCGATCGGAACGATTCCAGGGAACGACATTCAAATGGTAATCTCTACACGGGCAAGCGTCAAGAACGATATGATGACTATCGACGgcgcaataaaaatgacaacaatcgTCAGAACAGTGGTCGAGCCACAAAATACGATAGTAATCGAAATTACagaagcaaaaatgaaaattatgaagaaGATTCGCCCACAAATTACAAAAAGAGAAATCGATACAACAACAAGGGTGGCAATAGTCAGATGAATGAGAAGTTGAATGGTTCAAATGGTACGAATGGTAGTGACATCGATAAAAATCACAAGGGCCAACCAAATAAACACCCGAAGAATGATATACCGTGGAATAGGAAACAAGAAAGAAATGACATGAGAGACCGAAAGAGATATGATGATCGGCCAAACCGTAATGCTCGATCAAATGCTACAAAAATCGATTCAGCAAATTTTTCACAACGCGAAAAACTGATTCGAGAAATTGATGCTGGCAGATTGGAATGTTTAGTGTGCTATGATATGATCAAACCATATAGTTCAGTGTGGTCGTGTCCCAATTGCTATCATATAATGCACTTGAACTGTATCATTAAGTGGGCAGAATCGTCGAAATCCGAAGAAGGCTGGCGATGTTGTGCTtgtcaaaatatttcgaaGACACCGCCACGTGAATACTTTTGCTTTTGTGGTAAAACCAAGAATCCACAGTACAATCGAACCGATATGGCACATAGTTGTGGTGATGTTTGTAGTCGAATCGATAGAGATAACTGTCCTCATCCATGCACACAACTTTGCCACCCAGGACCTTGTCCTCAGTGTCAGGTAATGGTAACTCGTGAATGTTGCTGCGGTAAGACTTCAAAGATGTACcaatgcaatcaaaaagtCGAATTCAAATGTGATCAACAGTGCGGAAAAGATCTGAATTGTAAAGTTCACACGTGTGAAAAATCATGTCACTCTGGCAATTGTGATGATTGCACTGAAGTGGTTGAACAAACTTGCTATTGTAGCCGAGAAAATCGAACAGTTCCGTGTACGAGAGAGAATAAAGAATCGTTGACATATTCATGTGGCAGTGTGTGCAACAAACAGCTAAAGTGTGGCAACCACAAGTGTAAAGAACTTTGCCATGATGGTGATTGTGGTGAATGTGAACTACTTCCGCAAAATGTTAAAACGTGCCCATGCGGCAAgacacaaatcgaaaaagatCAACGAACCAGTTGCATTGATCCCATCCCGTTATGTACGTCAACGTGCAAAAAACGATTGACATGCGGTCAACCCAGTAATCCACATACTTGCGTTAGTAAATGTCATTATGGAGTTTGTCCGCCATGCAATAAACAAACTGCCGTTAAATGTCGTTGCGGTCATATGGaccaaatgataaaatgtaatcaattgTCTACCAGAGCTGATGATGCTCGGTGTAAAAGGAAATGCACGAAAAAACGTAACTGCGGAAAGCACAAATGCAATCAAGAATGCTGCATCGACATTGACCATGAGTGCCCAATGAAATGCACATATACATTGTCGTGTGGTAAACACAAGTGTGAATCAACATGTCATAAAGGTCGTTGTTTACCTTGCTATCGAAGCTCATTCGACGAATTGTACTGTGAATGTGGTGCTAATGTTATTTATCCTCCGGTTCCTTGTGGCACGAAACGTCCAGCATGCGATCGACCATGTTCACGCCAGCATCCATGTGACCATGAAATTACTCACAACTGTCATTCAGCACAAAATTGTCCACCATGCATGGCATTCACGAAAAAATATTGTCACGGTCGACATGAGCAACGAAATATAATTCCATGTAGTCAAAAAGATTTCAGTTGTGGTCTTCCATGTAATAAACCATTAAAGTGTGGTCGCCACAAGTGTATCAAAATTTGTCATCCGGGTGCATGTGAAACTGAAACTgacatttgcaaacaaaattgtcCGAAACCACGTGTAATGTGTCCACACGCATGCAATGCACCTTGTCACTTGGATACACGATGTCCAGACACTTCGTGCCGTGAAACCATTGAAGTTTCTTGCCAATGTGGTTTACGCAAACAAAATCGTACATGTCATGAATTTTCATCGGAATATCGTAAAATAGCGACAGCCCAATTGGCATCGAGCATggatcaaatgcaaaatggtGGAACTGTTGAGCTAAGTGATGTGTTGGGACCGATTAAGACCACAAACAATAAGACTCTTGAATGTAATGAAGAGTGTCGAATGGCAGAACGGAATCGTCGTTTGGCAATCGGTCTTCAAATTCGGAATCCGGATCTTCCTTCTAAATTGCAGCCAAAATATTCCGAATTTATTCGTGGTTGGGGTAAAAAAGATCCAAAATTGGTGTCAATGATACACGAGAAGCTAACAGATTTGGTAAAATTGGCCAAagaaagtaaacaaaaatcgcGCAGCTATTCGTTTCCCACGATGAATCGCGAAAAACGGCAATTGGTACATGAAATGTGCGCAATGTTTGGTGTTGAAAGCAAGGCTTATGATGCAGAACCGAATCGAAATGTTGTGGCAAGTGCGACTCGTGTCACTTCATGGCTGCCCTCGATGAGCATAATGGAAGTTTTAGAGCGAGAAAATGGTCAGCGTCGAGTTCCAGTACCTAATAATATGAATGCTTGGGGTATCAGGCGCTAG
- Protein Sequence
- MANYNNHDRNKGGYFDQYVNFDQFLMQHNMNNRSPLRGPQSGNGFMSPNSEPGNSNSSFHSPNAPNGAFYFQSQSAATSGFGPQNWVQNSNLTATATEFIPQQASSASNSTSLLATASEFIPRNLHGLDRPSKEFPSNAKKQTDTVSCDKGKNVTDDNASKTESVIQALSNTHISEEKSNEPKALNSSGGAIKKVRSQDYRNDRSDRNERIDRNDSRERHSNGNLYTGKRQERYDDYRRRNKNDNNRQNSGRATKYDSNRNYRSKNENYEEDSPTNYKKRNRYNNKGGNSQMNEKLNGSNGTNGSDIDKNHKGQPNKHPKNDIPWNRKQERNDMRDRKRYDDRPNRNARSNATKIDSANFSQREKLIREIDAGRLECLVCYDMIKPYSSVWSCPNCYHIMHLNCIIKWAESSKSEEGWRCCACQNISKTPPREYFCFCGKTKNPQYNRTDMAHSCGDVCSRIDRDNCPHPCTQLCHPGPCPQCQVMVTRECCCGKTSKMYQCNQKVEFKCDQQCGKDLNCKVHTCEKSCHSGNCDDCTEVVEQTCYCSRENRTVPCTRENKESLTYSCGSVCNKQLKCGNHKCKELCHDGDCGECELLPQNVKTCPCGKTQIEKDQRTSCIDPIPLCTSTCKKRLTCGQPSNPHTCVSKCHYGVCPPCNKQTAVKCRCGHMDQMIKCNQLSTRADDARCKRKCTKKRNCGKHKCNQECCIDIDHECPMKCTYTLSCGKHKCESTCHKGRCLPCYRSSFDELYCECGANVIYPPVPCGTKRPACDRPCSRQHPCDHEITHNCHSAQNCPPCMAFTKKYCHGRHEQRNIIPCSQKDFSCGLPCNKPLKCGRHKCIKICHPGACETETDICKQNCPKPRVMCPHACNAPCHLDTRCPDTSCRETIEVSCQCGLRKQNRTCHEFSSEYRKIATAQLASSMDQMQNGGTVELSDVLGPIKTTNNKTLECNEECRMAERNRRLAIGLQIRNPDLPSKLQPKYSEFIRGWGKKDPKLVSMIHEKLTDLVKLAKESKQKSRSYSFPTMNREKRQLVHEMCAMFGVESKAYDAEPNRNVVASATRVTSWLPSMSIMEVLERENGQRRVPVPNNMNAWGIRR
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -