Aaph001081.1
Basic Information
- Insect
- Aphidoletes aphidimyza
- Gene Symbol
- pnr
- Assembly
- GCA_030463065.1
- Location
- CM059996.1:13343667-13355909[-]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.56 1.8e+03 -1.3 0.1 22 28 37 43 34 45 0.78 2 2 7.1e-17 2.3e-13 49.6 3.8 1 35 526 559 526 560 0.98
Sequence Information
- Coding Sequence
- ATGTGCTGGGTAATGGCCATTGTTCTTCTTTTGCGTGTGGTGCAAATTGCCACAATGACCGAAGTTGTCATCCATTCGGTGTCACCAAACGATGGATTACCAACGATCGTATGTAATATGTGCCGAACACAATTGGATACATGCCAGCAGTTTCGTGATAAAGCACAAAGTTCGCAGCAAAAATTGcagaattttttaaaattcgcCAACAAATTGACGGGTGATCCACAGGATGTGCTCAAACAAACATCATCAAATTTGGATGAAATGCTGCATTTGTCCTGCCGTGAAGCGTCCGAGCACACGGCCGCCACTGCTTTAACCGAACTTCgtaacaacaataatcatcatctaaaaaataaatcaattgccAGCCCGAATGCAATAGTTACCTCAATACTCAGCAAAAATCATATAGATCATTTGGAAGCGAATTCAGTATCTGTGATTCCAATCGATGCGGCCAATAAGCACAACAATGGCAGCATTTTACCTGGCGCCGTACCAAATGCACAACAACCGAATCGAATTTCGGTGAAAAAATCACTTGGCCAAATAAATGCGGCAGTTACcctaaatcaaatgaatcatatGCATGCGACGATGCCACCAGAAGCGGCCACTGCATTGGAAATGCATCGATTGACACAATTGCAACAGCAACTTGAAACGGCCGCCGTTTTAATGGATATCAGTAAAAAGGTGATCATTTCACCACCCAGCTCGAATCCACAGTCGCCGGGTTTGGGTGACAGTCAACAAAATGCTAAAATGACCATTAAACGTTCGAGCGGCGACGAAATCGATTCGTCAGCAGCCAAACGCATGAAAACCAATGCCAAAGGTAATCACGTAACAACAACCGTTTACCAGTTAGATTCAAATGTACGACCGAGTGTCAGTGTTAAATCAGAGCCAGTATATAGTGCCGCTGATGATTCAGAAGGTAATCGCTATGATAGTGATAATGATAGTAATGACAGTGATCCAGGACGACTTGAAATGGACATCAGCTCATCGCATGACAATGATGATGGCAACAATGATGCAGGACGATGCTCATCAACGCCGGTTAAATTGGTCTATAAGCACAACAGAAGCTTCAATAACAATACACCGTCCGGCAGAGATACACCAGAGAGCAACAAATCCGATGATCATCGCACAGATCCAGCTACCACACAACTTTGGCAAGCTTTGGCACGATCTACTGGAAATGGAACTGGAAATGAAGCCACACAACTTTTGCGACAAATGATCACAGCACGATCATTAGGCCTGCCGATACCATCAGCTTTGAATATAAGCCGCAACATGAATGATCAACCAATTGCATTAGTTAAGAATGAAGGATCAAAATCGTCATCTGGCCGTCGAAAACAATCGTGCCCGAGCAAAGCTTCGACAGacaaatcaatggaaaatgaagtgcttgcaaatatgaaaaatgaaaaaccaatgaatgatacaaaaatgaatctaTCAAATGCCAAAGTTTGGGCTAATAATGTTGATGCAAAACCCAAATCAGCACCAATCGATAGCAACCAAAGTCCGAATCAAAAAGATATGTCGTGCACAAATTGTGGTACACTAACAACGACCATTTGGCGGCGTAACGTTCGTGGTGAAATGGTTTGCAATGCATGCGGTTTGTACTTTAAATTGCACGGTGTTAATCGGCCACATTCAATGCGTCGTGATACCATTCATACACGCCGAAGACGACCGAAGGGTGACAAATCTGGACGCAGGCGATCCAAAAATCAAGATGCAGGAAATACATCTGGTGCGGATCAATCGCCGAACGGTTTTAACGATCAACCGGATCCACATGATTTGGCTTtgcaaaatcacaatttattgattgcgTTGGGCGCTGCTCGACAAGCCGCTCCTGGTGCTCAATTTGCTATGCCTGCACATTTCTTTGATCCACATTTCTTGCGAACGCAACAATATGGTGATGGTGGCAGTGATGCTCATGGCGATGACAACAGTAACAATTCATCGATCAACCGCCGTCGAGACGATGAGGATGAAATGGacgatgatgaagatgaaaatgatgcgGATTCGACAAATCTACCTCTGAATTTGGTAGCCACACAATTCGCCGAATGA
- Protein Sequence
- MCWVMAIVLLLRVVQIATMTEVVIHSVSPNDGLPTIVCNMCRTQLDTCQQFRDKAQSSQQKLQNFLKFANKLTGDPQDVLKQTSSNLDEMLHLSCREASEHTAATALTELRNNNNHHLKNKSIASPNAIVTSILSKNHIDHLEANSVSVIPIDAANKHNNGSILPGAVPNAQQPNRISVKKSLGQINAAVTLNQMNHMHATMPPEAATALEMHRLTQLQQQLETAAVLMDISKKVIISPPSSNPQSPGLGDSQQNAKMTIKRSSGDEIDSSAAKRMKTNAKGNHVTTTVYQLDSNVRPSVSVKSEPVYSAADDSEGNRYDSDNDSNDSDPGRLEMDISSSHDNDDGNNDAGRCSSTPVKLVYKHNRSFNNNTPSGRDTPESNKSDDHRTDPATTQLWQALARSTGNGTGNEATQLLRQMITARSLGLPIPSALNISRNMNDQPIALVKNEGSKSSSGRRKQSCPSKASTDKSMENEVLANMKNEKPMNDTKMNLSNAKVWANNVDAKPKSAPIDSNQSPNQKDMSCTNCGTLTTTIWRRNVRGEMVCNACGLYFKLHGVNRPHSMRRDTIHTRRRRPKGDKSGRRRSKNQDAGNTSGADQSPNGFNDQPDPHDLALQNHNLLIALGAARQAAPGAQFAMPAHFFDPHFLRTQQYGDGGSDAHGDDNSNNSSINRRRDDEDEMDDDEDENDADSTNLPLNLVATQFAE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01288692;
- 90% Identity
- -
- 80% Identity
- -