Aaph017388.1
Basic Information
- Insect
- Aphidoletes aphidimyza
- Gene Symbol
- Znf131
- Assembly
- GCA_030463065.1
- Location
- CM059999.1:42471843-42481385[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 16 0.00014 0.0075 16.8 1.2 1 23 240 262 240 262 0.98 2 16 0.0024 0.13 12.9 2.1 1 20 268 287 268 289 0.96 3 16 0.00022 0.012 16.2 0.9 1 23 521 543 521 543 0.98 4 16 1.2e-05 0.00065 20.2 2.1 1 23 549 571 549 571 0.99 5 16 0.16 8.8 7.1 1.1 1 21 578 598 578 599 0.93 6 16 3.3 1.8e+02 3.0 0.8 1 10 605 614 605 617 0.92 7 16 0.0049 0.27 11.9 3.3 1 23 859 881 859 881 0.98 8 16 0.00091 0.05 14.2 5.0 1 23 887 909 887 909 0.97 9 16 0.002 0.11 13.1 4.1 1 23 942 964 942 964 0.99 10 16 0.69 38 5.1 0.4 1 21 970 990 970 991 0.93 11 16 2.6e-05 0.0014 19.1 3.8 1 23 1026 1049 1026 1049 0.98 12 16 0.00013 0.0072 16.9 1.4 1 23 1300 1322 1300 1322 0.98 13 16 0.002 0.11 13.1 7.2 1 22 1328 1349 1328 1356 0.93 14 16 0.91 50 4.8 0.4 2 20 1364 1382 1363 1384 0.91 15 16 0.12 6.6 7.5 2.3 1 23 1390 1413 1390 1413 0.95 16 16 0.00057 0.031 14.8 1.2 1 23 1419 1442 1419 1442 0.97
Sequence Information
- Coding Sequence
- atgcatttgaccGATGTTCGGCGTGAAGTGGACGAAATGCTCGAGGGATTTGAGCACCAAGCAACATTCTCGTTGAAGAAAATTGATCGACGCTTCGAATCGTTGGGCCAGTCATTTGACGAGGAGTTCAGACAATATTTCCTGCAAGTTTCGATTGAAAGGTTATCAACCAGTTACACCAAAGTCCAAATTGAAAGCAACAGAAGTCAAACGAAAATTGGCGACTTGATCAACAAACCTTCGTCTAAGGATGGATATGGTGTGTCTGACGAAGATCAATCAACTAGTTCACTTTTGGGGAGTTTAGTGAAAGAGGAAAGGACAAACTCAGTTGATGACGATgacaatgtgaatgtgaaatcgGAAAAGAATACAAATCAGTTGGACTCCGTGATAGAAATACTCAGATCGAGTGACGAAGAAGACAGCGATGAATCGCAAAACTATCGattacaaaccaaaattgaatgggAGGAAACTGATTGGATGAATGATGCGAGTCGCAACGAAGTGAGTCACAACAATGACGAAGAGAACAGTGATGAGGTTTCAAATGAAGAGGAGTTCGATATCAAACCCAAAATAGAAATAGTCGACGTATCTTTGAATGGTGGATACAGTACAATCAATAAAGTCACAAATGGAAATCGAGCTGGTTCATCTTCACAGCTGAGAAAAGACAAGATGAACCCATCATATTCaaagaatacaaaacaattcaattgtgaGCTTTGTGAATATGGAACTGATTACAAACAAAATCTCAATAGACATATGAGAACGCATACCAATGAGAAACCCTTTCGATGCAGCCGTTGTCCAAAACAATTTGTAACTTCCTTGCATTTCAAAGCACATATGTTTCAAATGCGTTTGCCCGATGTACGGCGTGAAGTGGACGAAATGCTCGAGGGATTTGAGCACCAAGCAACATTCTCGTTGAAGAAAATTGATCGACGCCTCGAATCGTCGGGCCAGTCACTTGACGAGGAGTTCAGACAATATTTTTTACAAGTTTCGACTGAAAGATTGTCAACCAGTTACACCAAAGTCCAAATTGGAACCAAAAGATGTCAAACGGAAACTGGTGGCTTGAACAACGAACCTTGGGCTCAGGATGGATATGGTGTGTCTGACGATGAACATGAACAGTCAACTAGTTCCCCTTTGGGAAGTTCAGTGAAAGAGGAAAAGACAAACTCAGTTGATGACGATGACAATATgagtgtgaatgtgaaatCGGGAAAGAGTGCAAATCAGTTGGACTCCGTGGTAGAAATACTCAACTCGAGTGACGAAGAAGACATCGATGAATCGCAAAGCTATCACTTGGAaactaaaattgaatgtgaggAAACAGATTGGATGAACGATGCGATTGGCAACGGAATCAATCACAACAATGACGAAGGAAACAATGATGAGGTTTCAATTGATATCGAACCCAAAATAGAAATGCTCGACGAAGACCCAATCAATGTGTCTTCGAATGGTGGATACAGTACAATCAATAAACACAATGAAAAAATAGCTCACGAAGAAAAGTGCATGACTCGTCACTTTGAATGCTATGTTTGTAAGTACGTCACCACACTGAAGACAAATTTAGTGATACACATGCGAACGCACACCGGAAATAAACCATATCGATGCAATCGTTGCTACAAAGAATTCACCCAACCGTGGAGTCTCAAACAGCACATGACAACTCATAAGGACAAAAACCTCCCGTTTCATTGTAAAGGCTGTTTCCGTAGATTTCCGGAGGAGAGTGAAATGGAAGCACATGAAAAACATTGTCAATATCGTCGTTACGAATGTGAAATCTGCAAGAAATATTTCCAAATGCGTTTGACCGATGTGCGGCGTGAAGTGGACGAAATGCTCGAGGGATTTGAGCACCAAGCAACATTCTCGTTGAAGAAAATTGATCGACGCTTCGAATCGTTGGGCCAGTCACTTGACGAGGAGTTCAGACAATATTTTCTGCAAGTTTCGATTGGAAGATTGTCAACCAGTTACACCAAAGTCCAAATCGAAAGTAACAGAAATCAAACGGAAACTGGTGGCTTCACCAACGAATCTTCAACTCAGACTGGATATGGTTTGACTGACGAAGATCAGCCAACTAGTTCACTTTTTGGAAGTTCAGTGAAAGAGGAAAAGACCAACTCAATTGATGACACTGTAAATGTGAAATGGGAAGAGGTTGGAACTCAGATGGACTCCGTGGTAGAAGAACTCAGCTCGAATGTCGAAGAAGACATCGATGAATCTCAAAACTATCACTTggaaaccaaaattgaatgtgaggAAACTGATTGGATGAATGATGCGACTGGCAACGAAATGAGTCAAAACAATGACGAAGGGAACAGTGATGAGGTTGCAAGCAAAGAAGAATTCTATATTGAACCCAAACCAGAAGTGATCGACGAAGGCCCAATCAACGTCTCTTTGAATGATGAATACAGAACAATCAATAAAGTCACAAATGGAAATCGTGCTGGATCATCTTTGCGgttgaaaaaaagagacaagGAGAAGCCATCATGTTCAAAGAattcaaaaccattcaatTGTGAGCTTTGTGAATACGGATCTCATCGCAAATATGACTTCAAAGTGCATATGCGAACGCACACCAAAGAGAAACGCTTTGAATGCAGCCATTGTGCTAAATGCTTTACACATTCACAGCCCCTCAACGCACATATGGTGTCACATAAGGATGAATTTCCGTTCCATTGCTCGAATTGTTTTCGTGGATTCTTTCAAGACGATGAAAAATTTGCTCacgaaaaaaagtgcaaacaTCGTCGCTATCAATGCTAtgtttgtaaatatttcatcTACAGGAAGACACATTTGGTGATACACATGCGAACGCACACCGGAAATAAGCCATATCAATGCAGTCGCTGTTTGCGTAGATTTCCGGAGGAAAGTGAAAAGAAAGCACACGAAAAAAGTTGTCAATATCGTCGCTATGAATGCGACATCTGCAAAAAATTTGACACTGCTATAAAATCTCGAATGGAAAACCATATACGAACTCACACGGGTGAAAAACCGTTCCGTTGTGAAGTGTGCATGAAATGcttcaatcaaaaatcgaGTCTTACGCGACACTTGAACACCGTTCACAAAACATTTCAAATGCGTTTGACCGATGTGCGGCGTGAAGTGGACGAAATGCTCGAGGGATTTGAGCACCAAGCAACATTCTCGTTGAAGAAAATTGATCGACGCCTCGAATCGTTGGGCCAGTCACTTGATGAAGAGTTCAGACAATATTTTCTGCAAGTTTCGATTGGAAGATTGTCAACCAGTTACACCAAAGTCCAAATCGAAAGTAACAGAAATCGAACGGAAACTGGCGTCTTCATCAACGAACCTTTAACTAAGACTGGATTTGGTTTGATTGACGATGATCAGTCAACTGATTCACTTTTGgGAAGTTTGGTGAAAAAGGAAAGGACGAAGTCAGTTGATGACGATGACAATATGAGTGTCAATGTGAAATCGGAAAAGGGTGCAAATCAGTTGGACTCCGTGGTAGAAATACTCAGCTCGAGTGACGAAGAAGACATTGATGAATCGCAAAACTATCGattacaaaccaaaattgaatgggAGGAAACAGATTGGATGAACGATGCGAGTCGCAACGAAGTGAGTCACAACAATGACGAAGAGAACAGTGATGAGGTGACAATCAAAGAAGAATTCTATATCGAACCCAAAATAGAAATGCTGGACGAAGACCCAATCAACGTCTCTTTGAATGGTGGATACAGTACAATCAATAAAGTCACAAATGGAAATCGTGCTGGATCATCTTCACAGCTAAGAAAAGACAAGATGAACCCATCATGTTCaaagaatacaaaacaattcaattgtgaGCTTTGTGAATATAGAACTGATTACAAAGGAAGTCTCAATAGGCATATGAGAACGCACACAAATGAGAAACCCTTTCGATGCAGCCATTGTTTAAAACGATTTGTAACTTCGTCACAGTTCAAAGTACACATGAATCTCAAAATACACATGACAACTCACAAGGACGAAAAACTCCCACTTCATTGTAAAGTATGTTTCCGTAGATTTCCGGCGAAGAGAGAAATGGAAGCTCATGAAAAAGACTGTCAATATCGTCGATACGAATGTGAAATCTGCAAGAAATATGTAACTGGTAATAAAACTCATATGGAAATGCACATGCGAAAACATACGGGTGAAAAGCCGTTTCGCTGCGAGATGTGCATGAAACGCTTCACCATAAAATCTGGTCTCATGCGACACTTGAGAAACATTCACAACCGAGGCAACTTGTAA
- Protein Sequence
- MHLTDVRREVDEMLEGFEHQATFSLKKIDRRFESLGQSFDEEFRQYFLQVSIERLSTSYTKVQIESNRSQTKIGDLINKPSSKDGYGVSDEDQSTSSLLGSLVKEERTNSVDDDDNVNVKSEKNTNQLDSVIEILRSSDEEDSDESQNYRLQTKIEWEETDWMNDASRNEVSHNNDEENSDEVSNEEEFDIKPKIEIVDVSLNGGYSTINKVTNGNRAGSSSQLRKDKMNPSYSKNTKQFNCELCEYGTDYKQNLNRHMRTHTNEKPFRCSRCPKQFVTSLHFKAHMFQMRLPDVRREVDEMLEGFEHQATFSLKKIDRRLESSGQSLDEEFRQYFLQVSTERLSTSYTKVQIGTKRCQTETGGLNNEPWAQDGYGVSDDEHEQSTSSPLGSSVKEEKTNSVDDDDNMSVNVKSGKSANQLDSVVEILNSSDEEDIDESQSYHLETKIECEETDWMNDAIGNGINHNNDEGNNDEVSIDIEPKIEMLDEDPINVSSNGGYSTINKHNEKIAHEEKCMTRHFECYVCKYVTTLKTNLVIHMRTHTGNKPYRCNRCYKEFTQPWSLKQHMTTHKDKNLPFHCKGCFRRFPEESEMEAHEKHCQYRRYECEICKKYFQMRLTDVRREVDEMLEGFEHQATFSLKKIDRRFESLGQSLDEEFRQYFLQVSIGRLSTSYTKVQIESNRNQTETGGFTNESSTQTGYGLTDEDQPTSSLFGSSVKEEKTNSIDDTVNVKWEEVGTQMDSVVEELSSNVEEDIDESQNYHLETKIECEETDWMNDATGNEMSQNNDEGNSDEVASKEEFYIEPKPEVIDEGPINVSLNDEYRTINKVTNGNRAGSSLRLKKRDKEKPSCSKNSKPFNCELCEYGSHRKYDFKVHMRTHTKEKRFECSHCAKCFTHSQPLNAHMVSHKDEFPFHCSNCFRGFFQDDEKFAHEKKCKHRRYQCYVCKYFIYRKTHLVIHMRTHTGNKPYQCSRCLRRFPEESEKKAHEKSCQYRRYECDICKKFDTAIKSRMENHIRTHTGEKPFRCEVCMKCFNQKSSLTRHLNTVHKTFQMRLTDVRREVDEMLEGFEHQATFSLKKIDRRLESLGQSLDEEFRQYFLQVSIGRLSTSYTKVQIESNRNRTETGVFINEPLTKTGFGLIDDDQSTDSLLGSLVKKERTKSVDDDDNMSVNVKSEKGANQLDSVVEILSSSDEEDIDESQNYRLQTKIEWEETDWMNDASRNEVSHNNDEENSDEVTIKEEFYIEPKIEMLDEDPINVSLNGGYSTINKVTNGNRAGSSSQLRKDKMNPSCSKNTKQFNCELCEYRTDYKGSLNRHMRTHTNEKPFRCSHCLKRFVTSSQFKVHMNLKIHMTTHKDEKLPLHCKVCFRRFPAKREMEAHEKDCQYRRYECEICKKYVTGNKTHMEMHMRKHTGEKPFRCEMCMKRFTIKSGLMRHLRNIHNRGNL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -