Aaph017393.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Aphidoletes aphidimyza
Gene Symbol
ZFX
Assembly
GCA_030463065.1
Location
CM059999.1:42501555-42510356[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 19 0.0023 0.13 12.9 6.8 1 23 248 270 248 270 0.99
2 19 0.18 10 7.0 4.5 1 23 276 298 276 298 0.98
3 19 3.7 2e+02 2.9 1.2 1 20 304 323 304 325 0.88
4 19 0.38 21 5.9 0.8 1 18 331 348 331 348 0.95
5 19 0.00025 0.014 15.9 1.5 2 23 601 622 600 622 0.96
6 19 0.3 17 6.3 3.4 1 23 628 650 628 650 0.98
7 19 3.7 2e+02 2.9 1.2 1 20 656 675 656 677 0.88
8 19 0.00016 0.009 16.6 1.5 1 23 683 705 683 705 0.99
9 19 0.0012 0.065 13.8 1.6 1 23 711 733 711 733 0.98
10 19 0.01 0.56 10.9 0.4 1 21 740 760 740 761 0.94
11 19 0.027 1.5 9.5 0.7 1 23 767 790 767 790 0.85
12 19 0.00012 0.0066 17.0 1.4 1 23 966 988 966 988 0.99
13 19 0.00035 0.02 15.5 1.0 1 23 994 1016 994 1016 0.98
14 19 7.1 4e+02 1.9 1.1 1 19 1022 1040 1022 1043 0.77
15 19 0.00013 0.0071 16.9 2.8 1 23 1049 1071 1049 1071 0.99
16 19 0.00014 0.0078 16.8 1.6 1 23 1077 1099 1077 1099 0.98
17 19 0.077 4.3 8.1 0.8 1 21 1106 1126 1106 1127 0.94
18 19 0.088 4.9 7.9 1.1 1 23 1133 1156 1133 1156 0.91
19 19 3.4e-05 0.0019 18.7 3.5 1 23 1162 1185 1162 1185 0.98

Sequence Information

Coding Sequence
ATGCGTTTGACCAATGTGCGGCGTGAAGTGGACGAAATGCTCGAGGGATTTGAGCACCAAGTAACATTCTCGTTGAAGAAAATTGATCGACGCTTCGAATCGTTGGGCCAGTCACTTGACGAGGAGTTCAGACAATATTTTCTACaagtttcgattgaaatATTGTCAACCAGTTACACCAAAGTCCAAATAGAAAGTAACAGAAATCAAATGGATACTGACGGCTTGATCAACGAACCTTCAACTCAGACTGGATATGGTTTGACTGACGAAGATCAGTCAACTAGTTCGCTTTTGGGGAGTTTAGTGAAAGAGGAAAGGACAAACTCAGTTGATGACGATGACAATGTGGATGTGAAGTCGGAAAAAGATGCAAATCAGTTGGACTCCGTGGTAGAAATACTCAGCTCGAGTGACAAAGAAGACAGCGATGAATCGCAAAACTATCGattacaaaccaaaattgaatgtgaggAAACTGATTGGATGAATGATGCGACTGACAATGAAGTGAGTCACAACAATGACGAAGGGAACATTGATGAGGTGACAATCAAAGAAGAATTCTATATTGAACCCAAACTAGAAGTGATCGACGAAGACCCAAACGACGTGTTTTTGAACAGTGAATACAGTACAAGCAATAACGTCATAAATGGAAATTCTACTGGAACTTCACAGCTATCTTCACAACTGAAAGATGGCAAGGAGAAACCAACGTGTTCGAATGATTCAAAACGATTCAAGTGTAAACATTGTGATTATGGTACCGATTACAAATGTAATCTAAATATGCATCTGCGAACGCACACCAATGAGAAACCTTATCGATGCAGCTGTTGTTTTAGATGCTTTGCAGGTGTGACGAGTCTCAACAGACATATTGCGACGCATAAGGATGAATTTCCATTCCATTGCTCGAATTGTTTCCGTGGATTCTTTCAAAGCGGTGAAAAAGTTGCTCACGAAAAGAATTGCACAAAACGTCGCTATGAATGCTATGTTTGTAAATATGTCACCGTCAATAAGAAAAATTTGTTTCGAATGCGTTTCACTGATGTGCTGCGCGAAGTGGACGAAATGCTCGGGGGATTTGAGCACCAAGCAACATTCTCGTTGAAGAAAATTGATCGACGCTTCGAATCGTTGGGCCAGTCACTTGACGAGGAGTTCAGACAATATTTTCTACAAGTTTCGACTGAAATATTGTCGACCAGTTACACCAAAGTCCAAATTGAAAGTAACAGAAATCGAACGGAAACTGGCGGCTTCATCAACGAACCTTTAACTCAGACTGGATTTGGTTTGATTGACGATGATCAGTCAACTGATTCACTTTTGgGGAGTTTAGTGAAAAGGGAAAGGACAAACTCTATCGATGATACCGCGAATGTGAAATCAGAAAGGGATGGAAATCAATTGGAATACGTGGACTACGTTGTAGAAAAAGTCAGATCAAGTGACAAAGAAGATATCGATGAATCGCAAAACTATCAattacaaaccaaaattgaatgtgaggAAACAGATTGGATGAACGATGCGATTGGCAACGAAATGAGTCACAACAATGAAGAAGGGAACAATGATGAGGTTGCAATCAAAGAAGAATTCTATATTGAAcccaaaataaaagtgatcGACGTAGACCCAAATGACGTCTCTTTGAATGGTGGATACAGTACAAGCAATGAagtcacaaatgaaaatggtgcaGGATCATCTTTGCGATTAATGGCAAGAGCAAACGATGAATCAGATGCTCAGAAGCCATCATGTTCAAAGGATTCAAAACGATTAAATTGTGACCTTTGTCAATATGGAACAGATCGCAGAGATCACCTCAATGTGCATATGCGAACGCATACAAATGAGAAACCTTATCGATGCAGCTGTTGTTCTAGATGCTTTGCAGGTGTGACGAGTCTCGACAGACATATTGCGACGCATAAGGATGAATTTCCGTTTCATTGCTCGAATTGTTTCCGTGGATTCTTTCAAAGCGGTGAAAAAGTTGCTCACGAGAAGAATTGCACAAAACGTCGctatgaatgttttatttgtaagTATTTCACCAATCGCAAGACAGATTTGGTTATACACATGCGGATGCACACGggaaataagccatatcgatGCAGTCGATGCTCCAAAGGATTCACAATATTGCGGGATCTCAAACGACACGCAACAACtcacaagaacaaaaaactgCCGTTTCATTGTAAAGGATGTTTCCGTAGATTTCCGGTGAAGAGTGAAATGGAAGCTCATGTAAAAGGCTGTTGGAATCGTCGTTATGAATGTGAAATCTGCAAGAAATTTGTCACTaataataaaactaaaatGGAAGCACACATGCGAGTTCACACGGGTGAAAAACCGTTTAGATTGTCAACCAGTTACACCAAAGTCCAAATTGATTGTAACAGAAGCCAAATGGAAACTGCTGGCCCCACCAACGAACCTTCAACACAGACTGGATATGGTTTGTATAACGATGATCAGTCAACTAGTTCACTTTTGGTGAAAAGGGAAAGGATAAACTCAATCGATGATACCGCGGATGTGAAATGGGAAGAGGTTGAAACTCGAGTGGACTCAGTGGTAGAAAAACTCAACTCGGGCTACGAAGAAGACATCGATGAATCGCAGAACTATCACTTagaaaccaaaattgaatgtgaggAAACTGATTGGATGAACGATGCGATTGGCAACGAAGTGAGTCATAACAATGACGAAGGGAACAGTGATGAGGTTTCAATTAAAGATGCCTCTTCGAATGGTGGATACAGTACAAACAATGACGTTACAAATGGGAATCGTACTAGATCATCTTCAGAATTGAAAGGTGATAAGGAGAAGCCATCATGTTCAAAGAATGCAaagcaattcaaatgtgaGCTTTGTGAATACGGAAGTGTTTACAAAGGACATCTCAATGTGCATATGCGAACGCATACGAATGAGAAACCCTTTCGGTGCGGCCGTTGTTTTAAACGCTTTGCAGATATATCGGTTCTCAAAAGACACATGGTAACGCACAAGGATGAATTTCCGTTCCATTGCTCGAAGTGTTTTCGTGGATTCATTCAAGACAATGAAAAATTAGCTCACGAAAAAAAGTGCAAGAGACGTCACTATGAATGCTATGTTTGTAAATATATCACCACCCACAAAACAGATTTGGTCAGACACATGCGGATGCACACGGGAAATAAGCCATTTCAATGCAGTCGTTGCTCCAAAGGATTCACAATGTTGCGGGATCTCAAACAGCACATGGTAACTCACAAGGACAAAAAACTGCCGTTTCATTGCAGTGGATGTTTCCACAGATTTCCAATGAAGAGTGAAATGGAAGCTCATGTAAAAGGCTGTCGCAATCGTCGTTACGAATGTGAGATCTGTAAGAAATATGTCACtcgttttaaaaataatatggAAGGCCACATGCGAAGCCATACGGGTGAAAAACCGTTTCGCTGCGAGGTGTGCATGAAATGCTTCAATCGTAAAGGCAATCTTAAGACACACTTGAACACCGTTCACAAGAGAGTTAGCTAA
Protein Sequence
MRLTNVRREVDEMLEGFEHQVTFSLKKIDRRFESLGQSLDEEFRQYFLQVSIEILSTSYTKVQIESNRNQMDTDGLINEPSTQTGYGLTDEDQSTSSLLGSLVKEERTNSVDDDDNVDVKSEKDANQLDSVVEILSSSDKEDSDESQNYRLQTKIECEETDWMNDATDNEVSHNNDEGNIDEVTIKEEFYIEPKLEVIDEDPNDVFLNSEYSTSNNVINGNSTGTSQLSSQLKDGKEKPTCSNDSKRFKCKHCDYGTDYKCNLNMHLRTHTNEKPYRCSCCFRCFAGVTSLNRHIATHKDEFPFHCSNCFRGFFQSGEKVAHEKNCTKRRYECYVCKYVTVNKKNLFRMRFTDVLREVDEMLGGFEHQATFSLKKIDRRFESLGQSLDEEFRQYFLQVSTEILSTSYTKVQIESNRNRTETGGFINEPLTQTGFGLIDDDQSTDSLLGSLVKRERTNSIDDTANVKSERDGNQLEYVDYVVEKVRSSDKEDIDESQNYQLQTKIECEETDWMNDAIGNEMSHNNEEGNNDEVAIKEEFYIEPKIKVIDVDPNDVSLNGGYSTSNEVTNENGAGSSLRLMARANDESDAQKPSCSKDSKRLNCDLCQYGTDRRDHLNVHMRTHTNEKPYRCSCCSRCFAGVTSLDRHIATHKDEFPFHCSNCFRGFFQSGEKVAHEKNCTKRRYECFICKYFTNRKTDLVIHMRMHTGNKPYRCSRCSKGFTILRDLKRHATTHKNKKLPFHCKGCFRRFPVKSEMEAHVKGCWNRRYECEICKKFVTNNKTKMEAHMRVHTGEKPFRLSTSYTKVQIDCNRSQMETAGPTNEPSTQTGYGLYNDDQSTSSLLVKRERINSIDDTADVKWEEVETRVDSVVEKLNSGYEEDIDESQNYHLETKIECEETDWMNDAIGNEVSHNNDEGNSDEVSIKDASSNGGYSTNNDVTNGNRTRSSSELKGDKEKPSCSKNAKQFKCELCEYGSVYKGHLNVHMRTHTNEKPFRCGRCFKRFADISVLKRHMVTHKDEFPFHCSKCFRGFIQDNEKLAHEKKCKRRHYECYVCKYITTHKTDLVRHMRMHTGNKPFQCSRCSKGFTMLRDLKQHMVTHKDKKLPFHCSGCFHRFPMKSEMEAHVKGCRNRRYECEICKKYVTRFKNNMEGHMRSHTGEKPFRCEVCMKCFNRKGNLKTHLNTVHKRVS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-