Basic Information

Insect: Aphidoletes aphidimyza
Gene Symbol: -
Assembly: GCA_030463065.1
Location: CM059997.1:31372766-31376837[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 4e-05 0.0022 18.5 0.7 1 23 157 179 157 179 0.95

2 15 0.00036 0.02 15.5 0.7 1 23 185 207 185 207 0.97

3 15 0.0022 0.12 13.0 0.0 1 23 307 329 307 329 0.96

4 15 0.017 0.96 10.2 0.1 2 23 336 357 335 357 0.97

5 15 8.1e-06 0.00045 20.6 2.6 1 23 387 409 387 409 0.98

6 15 0.061 3.4 8.4 0.2 1 23 425 447 425 447 0.94

7 15 0.0013 0.07 13.7 0.7 2 23 454 476 453 476 0.96

8 15 0.057 3.1 8.5 2.4 2 19 484 501 483 502 0.95

9 15 1.7e-05 0.00092 19.7 4.5 1 23 511 533 511 533 0.97

10 15 0.0007 0.039 14.6 0.6 2 23 539 560 538 560 0.97

11 15 5.8e-06 0.00032 21.1 0.5 1 23 568 590 568 590 0.98

12 15 0.0056 0.31 11.7 0.2 3 23 598 618 596 618 0.97

13 15 2.3e-05 0.0013 19.2 0.2 1 23 624 646 624 647 0.95

14 15 0.022 1.2 9.8 0.2 1 23 661 683 661 683 0.96

15 15 0.014 0.79 10.4 0.1 1 20 1115 1134 1115 1137 0.93

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	4e-05	0.0022	18.5	0.7	1	23	157	179	157	179	0.95
2	15	0.00036	0.02	15.5	0.7	1	23	185	207	185	207	0.97
3	15	0.0022	0.12	13.0	0.0	1	23	307	329	307	329	0.96
4	15	0.017	0.96	10.2	0.1	2	23	336	357	335	357	0.97
5	15	8.1e-06	0.00045	20.6	2.6	1	23	387	409	387	409	0.98
6	15	0.061	3.4	8.4	0.2	1	23	425	447	425	447	0.94
7	15	0.0013	0.07	13.7	0.7	2	23	454	476	453	476	0.96
8	15	0.057	3.1	8.5	2.4	2	19	484	501	483	502	0.95
9	15	1.7e-05	0.00092	19.7	4.5	1	23	511	533	511	533	0.97
10	15	0.0007	0.039	14.6	0.6	2	23	539	560	538	560	0.97
11	15	5.8e-06	0.00032	21.1	0.5	1	23	568	590	568	590	0.98
12	15	0.0056	0.31	11.7	0.2	3	23	598	618	596	618	0.97
13	15	2.3e-05	0.0013	19.2	0.2	1	23	624	646	624	647	0.95
14	15	0.022	1.2	9.8	0.2	1	23	661	683	661	683	0.96
15	15	0.014	0.79	10.4	0.1	1	20	1115	1134	1115	1137	0.93

Sequence Information

Coding Sequence: ATGGATTCGGAATATAGGATAGATTGGGCTGAAGGTGTGAATCATGAGCATGGCCATCAGATTATATGTGAATCACGTTCAGATGATTTAATTGAAGAGAACAATGACATTGAGGAGGATGAAGAGTATTTGGTGGGCGAAGAGATTATACCGTCAACGGAAATTATTACCATATCAAATAGTTTGGATCAAATAGCAGcggaaaatttaatttacatgGCCCAAGATGGCAGCGTTGCAAATATGGGTGATTTAATTGAGGAACAAGTTGATCAAGTCGACAATGCTGATTACAATGAACAACAGTATTTTGAGTGTCATGTGACAGAGGAAGTGATAACAGATGATTGGGTGCAGCAACAGGGCGAAGACAGAGTTGAAGTGCCAGTGTATCAATTGGTTGGCAATGAGCAAAATGAAGAGGTTCTTGTGCCACTTCCCACCGATGAGTATACTACATCACGGCCGTATCCATGTGATTTTTGTAGCCGTCGTTTTCGTAAAAAGGCCAATCTTATGAATCATATGGTTGCGCACAAGAATGTTAAGCCGCACATTTGTAATTTGTGTGGTGCACGTTATATTCGTAAGATGGAATtgatgaatcatttgaaagtGCATGCCCAGGTTCCAGATTCAAATATGGAATATATGAGCCACATGAAAGATGATGATAAAAGTGGTGATGAGCAAGATGACGACGATGAGTCTCTGTTGACCGTATTGCATACCAGTGAACCGGGTGGCAAACGACGAAAAACCATTACCGCCGCACCGAATACCACACGAAAAGTGATTAAAACCACCGAAGGCGGTAAAAAATTGGCGATGGCACAGAAAAAGCGTTACGATGACAATGCCAGTGTATCAAATAGCTATTTAACCGATCACATCACAGTATCGGATCCAAGTCGACCATTCGTATGTCAAGTGTGTGGTGTTGGTTTTGGCCGTGAAAAAGCCTTAAATGCGCACGTTTCACTGCACGGCGTTGACAATGCCATCGAGTGTGATACATGTAATGAAGTGTTTTGGTCGACCGAAGCATTACAGGAGCATCAAAAAATACATGCTGATGAAGAGAGCAGCGGTTCGGAATATGAGCCAGACGGTGATAAAACGGCTAGTGACGATGATTTTGATCCAAAATATGGAAATTATTACTGTAATGTGTGCGGTATGTCATTCCATCGAAGTGAATTGCTTAAGCGTCATGCAAAAACCCATAAGAATAACTATGATTCAACACGAGCTGAAAGCCCCAGTGAGAATCACTGTTGCAACGTTTGCGGTAGCACATTTGCCGAAGCGCTGGATCTACTTGCTCATGCTGAAATTCATACTAGAGCTTCAGTTCAAAAGTGTACATTGTGTGGTGAATCATTTACACATGATAATGAAATACGACAGCATATTGCGACTGTACATGAAAAAGAGCTGACAGAGACGACATGCCGAATGTGTGGCAAACATTGTAAAGATGAACGCACGCTAATGAAACATGCATGGGATCATTCCAAAGAGAAAAACCATTCCTGTTTGAAGTGCGGCAAAACATTTTACAATAAGGCACGTCTCAAGCGTCATATGCAATCGCATCGCAATAAATCGGTTACATGTAATGTGTGCGGCGAAAGTTTTCCAGATGGTCGTAGTTTGATGAACCATCGGCATTCGCACACGAATTTATCTGGGCGACAGTTTCCGTGCCGTGAATGTGGTAAAACATTTGGTTCAAGAAGTTCACAACAAATTCACATGAGAATTCACACAGGCGAGCGGCCATATGGGTGTCGGTTCTGTTGGAAGGCATTCGCTGATGGCGGAACTCTTCGTAAGCATGAACGAATCCATACAGGTGAAAAACCGTACGCCTGCCCTGTATGCCCCAGAGCATTCAATCAACGTGTTGTTTTGCGAGAGCACATTCGCTCACATCACTCACAACCGGATCCAAATTATGAGGACTCGTTGATGCCATTCTATTGTACGGTATGCGGAAACCTATTCAAAACTTCACAGgaaataattcaacatttgatcgAACACAGTGATGCGAATACCGTATCAAATCGACAACCAGTTGTCGGTCCACGAAAGTACAAGCGTCGACGTAAGCTAAAACCAGAAGAGTTAGAAACGTTccgaaaatcaaaaaatgaaccaacTGCAACGCCAAAATCGGCATCCAAACGAACATCTCGCAAACGTGATACATCGGAACAAAGTGATGCATATTACAGTTCATCATACGAACAGCAAGAAGAAGTGGCTTATGAAACAGTGACAAATGAcactgaaatggaaaatattgaggTGGATGAACCAGTAGTGCAGAGAGTACAGAATATTGGAGCGCGTGTTAAACAAGAACGCAATGATGAATATCAGGATCCACTTTATACCGAAGACTACCTCGAGACATCgccaaaaagaaaatcaccAACCAAGCGACAACAATCGGCGACACAAGTGAATGTTGCAGCGTCATCATCTTCCTTGTCATCACCAGTTCAACGTCAACCTCGGTTGATACACACCAGTAAGAAGAAAATTGTGGTTGAAACAAAAGGTGGCCGAACAGCGACCAAATTCAAAACCATCATCACATCAAATGAGATAAAGAAGCCAACAGCAGCCGGGCCACCAGTGGCAGAGGTGACAGTGAGTGCAACACGAAAATCAAGTCGCACGAAGCAACCAACGAAcaagaaaattgaatcgatgccATCGCCAGCCCGATCACTAACAAATGGAACACCACGCTCAGCCAAATCAACACCACAATCTGCAACGACGTCAACGAATTCAAAgtatcaaaataatttgttagCGGAATTATCGCGAAAAAGTTCAAACTTTAGTCCGGATGTTGTAAGTGATTTGGAGGAAATCTTGGGCTCACCGATTAAAACACATGAAACACGAAGTGAACAAACATCtcgcatacaaacaaaaactgaacaaatcaatgcaaaaagCGGTGGAATAGTGCGTGTCAATTACAAAAGTCAAACCGATGATGAACCAAAACCAGCAACACGGTCAAGCAAACGGTTAAGTAATCGCATTCAACCAACTCAACATAttcaaacagtaaaaaaaacacataaaagtAATGCGAGTACGCGAAGTGGttcgaaaaaatcgaacacatCAACATTTAATCATGGCCTTTCAAGCGAAGaagaaaacgaagaagaagaagaagatgaagaagaaagtCAGGGCAGCCAGGATGAACAATTCGATTGTTTGGCAAATAATGTAGCCGAAAATATTACACTGAATatcaaacaagaaaaagagGTTTCATACACAATGACAGACGATAATAGCATATTTACATGCGAAATGTGCTCATCTGTGTTCAGTGATCGAGCCCAATTGCTCTTACATGTTCCTgtacatatttaa
Protein Sequence: MDSEYRIDWAEGVNHEHGHQIICESRSDDLIEENNDIEEDEEYLVGEEIIPSTEIITISNSLDQIAAENLIYMAQDGSVANMGDLIEEQVDQVDNADYNEQQYFECHVTEEVITDDWVQQQGEDRVEVPVYQLVGNEQNEEVLVPLPTDEYTTSRPYPCDFCSRRFRKKANLMNHMVAHKNVKPHICNLCGARYIRKMELMNHLKVHAQVPDSNMEYMSHMKDDDKSGDEQDDDDESLLTVLHTSEPGGKRRKTITAAPNTTRKVIKTTEGGKKLAMAQKKRYDDNASVSNSYLTDHITVSDPSRPFVCQVCGVGFGREKALNAHVSLHGVDNAIECDTCNEVFWSTEALQEHQKIHADEESSGSEYEPDGDKTASDDDFDPKYGNYYCNVCGMSFHRSELLKRHAKTHKNNYDSTRAESPSENHCCNVCGSTFAEALDLLAHAEIHTRASVQKCTLCGESFTHDNEIRQHIATVHEKELTETTCRMCGKHCKDERTLMKHAWDHSKEKNHSCLKCGKTFYNKARLKRHMQSHRNKSVTCNVCGESFPDGRSLMNHRHSHTNLSGRQFPCRECGKTFGSRSSQQIHMRIHTGERPYGCRFCWKAFADGGTLRKHERIHTGEKPYACPVCPRAFNQRVVLREHIRSHHSQPDPNYEDSLMPFYCTVCGNLFKTSQEIIQHLIEHSDANTVSNRQPVVGPRKYKRRRKLKPEELETFRKSKNEPTATPKSASKRTSRKRDTSEQSDAYYSSSYEQQEEVAYETVTNDTEMENIEVDEPVVQRVQNIGARVKQERNDEYQDPLYTEDYLETSPKRKSPTKRQQSATQVNVAASSSSLSSPVQRQPRLIHTSKKKIVVETKGGRTATKFKTIITSNEIKKPTAAGPPVAEVTVSATRKSSRTKQPTNKKIESMPSPARSLTNGTPRSAKSTPQSATTSTNSKYQNNLLAELSRKSSNFSPDVVSDLEEILGSPIKTHETRSEQTSRIQTKTEQINAKSGGIVRVNYKSQTDDEPKPATRSSKRLSNRIQPTQHIQTVKKTHKSNASTRSGSKKSNTSTFNHGLSSEEENEEEEEDEEESQGSQDEQFDCLANNVAENITLNIKQEKEVSYTMTDDNSIFTCEMCSSVFSDRAQLLLHVPVHI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -