Aaph013040.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Aphidoletes aphidimyza
Gene Symbol
ZFY
Assembly
GCA_030463065.1
Location
CM059999.1:5071964-5075828[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 24 8.3 4.6e+02 1.7 0.5 1 23 144 166 144 166 0.65
2 24 0.0079 0.44 11.2 0.2 3 23 199 219 197 219 0.96
3 24 1.3 72 4.3 0.2 1 12 226 237 226 244 0.87
4 24 4.2e-05 0.0023 18.4 0.7 1 23 253 276 253 276 0.96
5 24 7.9e-07 4.4e-05 23.8 1.2 1 23 282 304 282 304 0.97
6 24 0.00052 0.029 14.9 0.2 1 23 310 332 310 332 0.98
7 24 0.2 11 6.8 4.6 1 23 337 359 337 359 0.97
8 24 2.9e-06 0.00016 22.1 0.8 1 23 390 413 390 413 0.96
9 24 1e-05 0.00057 20.3 0.1 1 23 419 441 419 441 0.97
10 24 0.00011 0.0061 17.1 4.7 1 23 447 470 447 470 0.97
11 24 0.0032 0.18 12.5 0.3 1 23 587 610 587 610 0.93
12 24 3.2e-05 0.0018 18.8 0.6 1 23 616 638 616 638 0.96
13 24 0.049 2.7 8.8 0.2 6 21 648 663 647 664 0.95
14 24 0.47 26 5.7 1.4 1 23 750 772 750 772 0.97
15 24 0.042 2.4 8.9 4.2 1 21 778 798 778 799 0.95
16 24 0.3 17 6.3 0.6 2 23 804 825 803 825 0.95
17 24 9.7 5.4e+02 1.5 1.1 1 13 832 844 832 854 0.79
18 24 8.7e-05 0.0049 17.4 2.0 1 23 859 882 859 882 0.95
19 24 0.00084 0.047 14.3 1.0 1 23 888 910 888 910 0.93
20 24 1.8e-07 9.9e-06 25.9 1.1 1 23 919 941 919 941 0.99
21 24 0.17 9.3 7.1 1.5 1 23 946 968 946 968 0.97
22 24 0.00018 0.01 16.4 3.7 2 23 974 995 973 995 0.97
23 24 5.9e-05 0.0033 17.9 1.2 1 23 1001 1023 1001 1023 0.98
24 24 0.0001 0.0056 17.2 0.2 1 20 1029 1048 1029 1050 0.95

Sequence Information

Coding Sequence
ATGTTGAGCGTTTTTTTGCAAAAGAGTGTTTATGAAAACGATGGACGACCGTCAAATATGTGTCTCACTTGTATTCCGAAATTGATCGAAGCATACGAATTACTAGATAAGGCAACACaaagtgaacaattttttcagCGAATTATTTGTTCAACGATTAACAATCCGCCAATTCCAACAGTTCAAGATACATTTGGAATAactgaatttgatgaaaatgtggcCGATCCATTGGATGGATGTAGTGttagaaatgaacaaatacacATATCAATGCCAGTTATCAAAACAGAGAATCTGGACGAGACATTTTCCAATGAAGCGAACACAACAGCTATTCAAACACCACCAGACAATACCGAAATAGTGTTGAAAACTAAAAGGAAATcagcaaacaattcaaataaaaaacggCATGCAAACGATGTATTTGAATGTTATATTTGTCATCGACAACCATTTACTCGCCAAAGTATCATCGGGCACATGGCAATACACGATattaaaaaaccattcaaatgtgAGATATGCGGAATGTTGCATCGTTTCGAACGTGATTTAGATTATCATTTGTGTGAAGGTGAAGAAGTTATCTGTGAATATTGTCCTGAAGTGTTTCACACAACCAAAGCCATGCTTAAGCATCTGGAGGTGCACAAAGAGACATTCCTAATGTATCGATGTTTTCGGTGTCGGAAATCATTTAACATGAACGCGCTGAGCGTCTGGCATGACATGCGACACGAACGATTCCAATTCGAATGTGGCATTTGtggcaaaaaatatgaaacaaaacaaactctAATCAATCATACACGATTTGTACATTCGAACGCAAGACCACATGTATGCACCGAATGTGGAAGAGGATTCAAAGATCGAAGTTCGcttaaaaaacatttgattattCATAGTGATGAAAAACCATTCACATGTCCGGAATGTCCGAAACGGTATCGATGGCAGGGTGGCTTAACGATTCACTTAACCacacatcgaaatgaaaaacatgtcTGTCGTCAATGCGGTTTTATTGCACAATCAAAGCATAAATTAAGAGATCATCAGAAAACTCACATTGAAACCGAAACAACTAAATTAAATGTAGACGAAAGCAAAGAGATGGGCCCACGCATGTGGCACGATATGCAACGTCATCGATTTAGTTTCGTTTGTAATATTTGTGGTAAAAAATTTCGAACGAAAACTACTCTTGGTGCTCATCTTCGTTTTGTGCACACTGATGAAAGACCCTTTGTTTGTACGCAATGTGGATTGGGTTTCAAAGACAGTAGTGCTTTAAAAAAGCATGCGATTGTTCACAGCGAGGAAAGGCCATTCGCTTGCCCGGAATGTCCATGTCAGTTTCGAAGGCGACCTCATTTAACAACTCATCAAAGAAAGTTTCATGGTGAACAAGAAATACCAGATACCAATAGAGCGATGGAACAAGAGATTGTGTTCACtgaagtgaaaattgaaattccaaccaATCAAGAGATTTCTACAGCCACTGAAAATGCCGATGAAAATGCCGAAATCAATAATGAAACAAACGCAAATGAAGAATTTTTggatattaaaataaaaagccaTGAGATGCTTTGCAGTGAAACGGAAATTGTTTCAGATCAGGTCCcgacaaatcaaataattttgccAGAAGAATATAGAATTAATCCAACGCCACAGTTAACCAAACCATTCAAAAGGAAGACTCAAAATTCTTCGGGTGACACGCAGCGTGATCATTACCTTTATGATTGTAACATTTGTGGTAAAAAATTTGGCAGAGCAAATATTCTAAGTGCTCACAAGCGTTTTGTGCATTCTGAAAATAGACCACATGTTTGTGATGAATGTGGAATGGGATTCAAAGAGAAGTCTGCattgaaaaaacacaaaattgttcaTAGCGATGAAATGCCATTCGTTTGTGCGTGTTCGCGCCGGTTTCGGCGTCTGGGTAATTTAACAGATCATCAAAAAAATTGTCGTCCTGAACTAAAAAAGCCagaaaaaacaatccaaaataGAGAAATAGATGTTCGCAATGAAACTAGCATTGAAATGACCATTGTACCTTCCGAAGTCCCAACAGATGAGGTGCTTGCAGAGGAAATCGATGTGGataaaaatcaagtaaaaaatACTGAAGAAACGAATTTCGATGAAGTGGAGGTAGTTCCAGCTGAAATCCGGCCAAATCAGTTGGTTTTAATAGATGACGATCGCATAATTGAAGCCTACGAATGTTACATTTGCAAACGACAAAAACCCACATTGAAACAGATGAAGAAACATGTGAGAGGTCATGAAATTACGATTTCTTTCAAGTGCAGTGTGTGTGGTGAACAATGCAGCTCGGCACATCGTCTGAATCAACATTTATGTCAAGATACAGAAGTCACTTGCGAATATTGCCCTGTAATATGTCGATCAACCACTGAAATGCTTCAACATTtagaacaacacaaaaatgatttcttGTTTTATAACTGTTTTCGatgttttaaaacatttaacaTGCAAATTTTACATAGTTGGCATGAAATACAACATGATCGTTGGACattcatttgtgaaatttgCAATAAGAAATTCGGAACCAAACGAACTCTAACAAATCACAAACGTTTTGTGCATACAAAAGAAAGACcaTTTCTGTGTGCCGAATGTGGAATGggattcaaacaaaaatgtgcattgaaaaAGCATGCTACGGTTCATAGTAATATAAGTAAattaaaaccattcaaatgttcaatgtgcCCAAGAAGTTTTCCAAGACAAGGTAgcttaaaaaaacacatggaTACCCATGTTGTTGAAAAACATGTCTGTCTTACGTGCGGTGTCGTAAAAAATTCGCTTACTTCGTTGAGAAGCCATCAAAAAACTCACATGGAGCGAACAAAGGAATGTGAAGTTTGTGGACataaatttttcacaaatgatCGTTTAAGGACTCATATGAGAAAGCATACCGGTGAAAAGCCATTCAGTTGTGATCACTGTTCAGTCGCATATGCTCAAAAGAATGATTTAGTTAAACATCTCAGGACTCACATTGGTGAAAATACCTATGTTTGTGAGAAATGTGATATGTCTTTTCGATATTATGCCGAACTGCGAAAACATTTGGACATTTGTGGTGTTGCTGCTCCATTTGATCAGCCAACCAACGACGAAATTGAAGTTCCATCAACATCTGCAGTCAAACCATAA
Protein Sequence
MLSVFLQKSVYENDGRPSNMCLTCIPKLIEAYELLDKATQSEQFFQRIICSTINNPPIPTVQDTFGITEFDENVADPLDGCSVRNEQIHISMPVIKTENLDETFSNEANTTAIQTPPDNTEIVLKTKRKSANNSNKKRHANDVFECYICHRQPFTRQSIIGHMAIHDIKKPFKCEICGMLHRFERDLDYHLCEGEEVICEYCPEVFHTTKAMLKHLEVHKETFLMYRCFRCRKSFNMNALSVWHDMRHERFQFECGICGKKYETKQTLINHTRFVHSNARPHVCTECGRGFKDRSSLKKHLIIHSDEKPFTCPECPKRYRWQGGLTIHLTTHRNEKHVCRQCGFIAQSKHKLRDHQKTHIETETTKLNVDESKEMGPRMWHDMQRHRFSFVCNICGKKFRTKTTLGAHLRFVHTDERPFVCTQCGLGFKDSSALKKHAIVHSEERPFACPECPCQFRRRPHLTTHQRKFHGEQEIPDTNRAMEQEIVFTEVKIEIPTNQEISTATENADENAEINNETNANEEFLDIKIKSHEMLCSETEIVSDQVPTNQIILPEEYRINPTPQLTKPFKRKTQNSSGDTQRDHYLYDCNICGKKFGRANILSAHKRFVHSENRPHVCDECGMGFKEKSALKKHKIVHSDEMPFVCACSRRFRRLGNLTDHQKNCRPELKKPEKTIQNREIDVRNETSIEMTIVPSEVPTDEVLAEEIDVDKNQVKNTEETNFDEVEVVPAEIRPNQLVLIDDDRIIEAYECYICKRQKPTLKQMKKHVRGHEITISFKCSVCGEQCSSAHRLNQHLCQDTEVTCEYCPVICRSTTEMLQHLEQHKNDFLFYNCFRCFKTFNMQILHSWHEIQHDRWTFICEICNKKFGTKRTLTNHKRFVHTKERPFLCAECGMGFKQKCALKKHATVHSNISKLKPFKCSMCPRSFPRQGSLKKHMDTHVVEKHVCLTCGVVKNSLTSLRSHQKTHMERTKECEVCGHKFFTNDRLRTHMRKHTGEKPFSCDHCSVAYAQKNDLVKHLRTHIGENTYVCEKCDMSFRYYAELRKHLDICGVAAPFDQPTNDEIEVPSTSAVKP

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
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