Aaph005239.1
Basic Information
- Insect
- Aphidoletes aphidimyza
- Gene Symbol
- cdc5l
- Assembly
- GCA_030463065.1
- Location
- CM059997.1:4463585-4464601[+]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 1.1e-15 1e-12 48.1 1.8 4 46 11 54 8 54 0.96 2 3 5e-11 4.7e-08 33.1 0.0 1 42 60 100 60 104 0.94 3 3 8.9 8.4e+03 -2.9 0.1 6 17 146 157 143 159 0.75
Sequence Information
- Coding Sequence
- ATGCCTCGCATTGTGGCTAAAGGTGGTATTTGGCGAAATACTGAGGATGAAATTCTCAAAGCAGCTGTTatgaaatatggaaaaaatcaATGGCCCCGAATTGCATCTCTATTGCACCGAAAAACTGTTGAACAATGTAAGGCGCGTTGGCATGAATGGTTAGATCCATCCGTCAAGAAAATGGATTGGTCACTCAAAGAAGATGAACGATTAATTCATTTAGCCAAATTGATGCCATCACAATGGCGAACGATTGCACCGATTGTCGGTCGAACAGCATCACAGTGTCTTGAACGATTCGATTATTTACTGGATAGAGCTCAGGAGAAGGAAACAGGTGAAATTATCACGAATAATCTAAGAAAATTGAAGCCAGGAGAAATTGATCCAAATCCAGAATCCAAACCAGCACGACCAGATCCCAAGGACATGGAtgaagatgaaattgaaatgctagCCGAGGCAAGAGCGCGTCTGGCCAACACACAAGGCAAAAAAGCAAAGAGAAAAGCACgcgaaaaacaaatggaagaAGCCACACGACTCGCATCATTACAAAAACGACGAGAATTACGAGCGaCCGGCATAAGAACCAGTTATTGTAAAAGAACTAGAGGCATTGATTATaatgatgaaattccattcgaaAAGACTCCAGCCGCCGGATTTTATGACACATCTGAGGAGCGTGTTTCAAGCAAACGGACCAATCCAACATAA
- Protein Sequence
- MPRIVAKGGIWRNTEDEILKAAVMKYGKNQWPRIASLLHRKTVEQCKARWHEWLDPSVKKMDWSLKEDERLIHLAKLMPSQWRTIAPIVGRTASQCLERFDYLLDRAQEKETGEIITNNLRKLKPGEIDPNPESKPARPDPKDMDEDEIEMLAEARARLANTQGKKAKRKAREKQMEEATRLASLQKRRELRATGIRTSYCKRTRGIDYNDEIPFEKTPAAGFYDTSEERVSSKRTNPT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -