Aaph005482.1
Basic Information
- Insect
- Aphidoletes aphidimyza
- Gene Symbol
- bab1
- Assembly
- GCA_030463065.1
- Location
- CM059997.1:8933054-8935358[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.9e-10 3.2e-07 30.1 0.0 2 39 372 409 371 411 0.93
Sequence Information
- Coding Sequence
- ATGGGAAGCGGCGAAGAACAAACGTATTGTTTGCGGTGGAATAACCACAAAACCAATTTGGTGGAAATTTTAGATGGattatttcaaaagaaaagcTATGTCGATTGCACACTTCATGTCGATGACATGAAGTTTTTTGTGCATCGTGTCGTTCTAGCGGCCaattcatcatattttcaaacaattctaCAAGATGTACCAATGGACCATTGTACCATTTTATTTCCGGGTGTACAGGGACGTGAAATGCAAATCCTTCTCGATTACATGTACACCGGCGAAGTGAATGTTACACAAAAGGATATTCTGCGAATTATCCAAATTGCCGAACAATTGGAAGTCAAAGGATTGACCGATATGAGCGATTTAAAAGATAAATTTGACCGAACTAAAGTTGAAGAATTGCCCGGATACAGTCTGAACAGCATCCAAGCCtcacaaatcaacaacaataaattgtcaaataaTCAGCAATCGTCACCAATCATTTCACAATCGGCCAACATTTCATCATCAGTACAAAGCAGCACCGGATCACCGCCATAcaattacaaatcaaattatgCAAATATGTTTGCCCCATCCGCATCGGATTGTCCGCCACCACAATGGCCCATCTCTGCCTTAACCGCTCAATTGCCACATGCTACTGGTTCCCGCTTTCAGAATGCCGTTAATGCTGCCGCTGCACTTGGATCCGTCTATGAATCAGGCTCTGACATGAACCCATTGAAACGTAAAAAGTTGTCATCATTTAACAGTATGATCGGTATGTCTCGCGATACATCAATATTGCGAAATGTTTTGGCTCAACCAAATGCCGTCGATTCATCACAACATCCTTCATTATTGCCAGGCAATGAACGTGAACGCAGCGATCGAAGTGACCGTAGTGACCGAAGCGACCGAAGTGATCGACACAGCACCTACTCAAATGGCACAGACTACTCGGAAAAGAAACCAAAATACGGCGAACCACATTCACCCTACACAGAGAAATTCGATGATGAAGAAAGTGGCCATAATTTAAGCGGAAATGATCGAGGCATCGCAAACTATTCACAGCCTCAAGCAAATCAAAAACCCGAATGGAAACGTTACAAGCAATACACACGTCAAGATCTAAACGATGCCATTCAAGCggtgaaaaatggaatgagcGCGCTACAAGCATCACGTCTATTCAAAGTACCGTCACGTACATTGTACGATAAAGTGAAGAAAATGGGCATCGTTGGTGCTCGACCAATGAACCGTGCCATCAAACGGAGCCCAAGCAATAATGGAAGCCCAGCCTCATTTCCGTATGGTATTAGCGGCACCCGAAGCCCATTAGCACATCAATTGGAGGGACAATCACATTCACAATCGATGGGCGGCGATGCCGAAAATGGCGGTGAAATGGAACAACGTGATCGCGATTCTCTCTTACATTCAATGGCAATGATGGATCcaaattttatattcaaagcGATAAGCGGCGGTGATATTGCAAGCCGAGCAGCTGTATTAGCCGCTGCAAATGGCTTCAAAAATGTGGGCCGTCAATCATCACAATCACCTCCGCCAGTCTATCAGGGATCATCTTCAGCCGCACCAGCCTCACCACCACGATCCATTCACGaggatgaagaagaagaagaagaaccaAGCATTCAAGAAGAAAGTGAACGACATTcctttgaaaatgtaaaattggaACGATCGATTGATGTGGAGGAAGATGCCGATGACGATCAAGTGGAAGATTTATCAATGTCACGGAAAAGTGAAAAAGTCAGTCCACCACCTTCGCCTGTGTCCGTTGCATCAGCGCCGAATGCCGATGCTGCTGTGCCCGCTCAAACAGGTGTCATTGTGCCGCCacaaaagtaa
- Protein Sequence
- MGSGEEQTYCLRWNNHKTNLVEILDGLFQKKSYVDCTLHVDDMKFFVHRVVLAANSSYFQTILQDVPMDHCTILFPGVQGREMQILLDYMYTGEVNVTQKDILRIIQIAEQLEVKGLTDMSDLKDKFDRTKVEELPGYSLNSIQASQINNNKLSNNQQSSPIISQSANISSSVQSSTGSPPYNYKSNYANMFAPSASDCPPPQWPISALTAQLPHATGSRFQNAVNAAAALGSVYESGSDMNPLKRKKLSSFNSMIGMSRDTSILRNVLAQPNAVDSSQHPSLLPGNERERSDRSDRSDRSDRSDRHSTYSNGTDYSEKKPKYGEPHSPYTEKFDDEESGHNLSGNDRGIANYSQPQANQKPEWKRYKQYTRQDLNDAIQAVKNGMSALQASRLFKVPSRTLYDKVKKMGIVGARPMNRAIKRSPSNNGSPASFPYGISGTRSPLAHQLEGQSHSQSMGGDAENGGEMEQRDRDSLLHSMAMMDPNFIFKAISGGDIASRAAVLAAANGFKNVGRQSSQSPPPVYQGSSSAAPASPPRSIHEDEEEEEEPSIQEESERHSFENVKLERSIDVEEDADDDQVEDLSMSRKSEKVSPPPSPVSVASAPNADAAVPAQTGVIVPPQK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00133393;
- 90% Identity
- iTF_00133393;
- 80% Identity
- iTF_00133393;