Aaph008535.2
Basic Information
- Insect
- Aphidoletes aphidimyza
- Gene Symbol
- bab1
- Assembly
- GCA_030463065.1
- Location
- CM059997.1:44900381-44901364[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 9.7e-16 1.6e-12 47.0 0.0 1 43 54 97 54 99 0.95
Sequence Information
- Coding Sequence
- ATGGAATCGAATCCATGGTTGGCTCCGTCAACATCGGCATCACTAGCAGtagAAAGTTATCAGTATCAATTACAATCGATGTGGCAAAAATGTTGGAGTACAAATCAAAATCTAATTCATAATTTACGTTTTCGTGAACGGGGACCATTGAAATCATGGCGTCCAGAGACCATGGCCGATGCCATAATGAGCGTTCTAAAAGATGGTCTATCATTGTCACAGGCGGCACGTAAATATGACATTCCGTATCCAACATTTGTGCTGTATGCAAACCGGGTACACAATATGCTTGGACCGTCAATGGATGGTGGTACGGATTTGCGACCGAAAGGCCGAGGTCGGCCACAGCGAATATTGTTGGGTGTTTGGCCAGAGGAAACCATCAAAGGTGTTGTTAAAACGGTCGTTTTCCGCGATGCAAAGGAGTTACGCGAAGAGGCTGGCATGCAGTTGTCCGCATTCGGAAGGCATTCGCCAATGTTCCCATTCGGCGATGGACAATTGGACTTTTCGGCTGGCCTACCAAATCATGCGCTCAACGCAAATTTGCCAGTCAATTTGGATAACGAATCATTGAGCTCATTGGCCATGAGCCGTTGTTGGCCATCATTGGCCAATCAGCAAGCATCTTCCGGatga
- Protein Sequence
- MESNPWLAPSTSASLAVESYQYQLQSMWQKCWSTNQNLIHNLRFRERGPLKSWRPETMADAIMSVLKDGLSLSQAARKYDIPYPTFVLYANRVHNMLGPSMDGGTDLRPKGRGRPQRILLGVWPEETIKGVVKTVVFRDAKELREEAGMQLSAFGRHSPMFPFGDGQLDFSAGLPNHALNANLPVNLDNESLSSLAMSRCWPSLANQQASSG
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01288053;
- 90% Identity
- iTF_01288053;
- 80% Identity
- -