Aaph008542.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Aphidoletes aphidimyza
Gene Symbol
bab1
Assembly
GCA_030463065.1
Location
CM059997.1:45093989-45111504[+]

Transcription Factor Domain

TF Family
HTH
Domain
HTH_psq domain
PFAM
PF05225
TF Group
Helix-turn-helix
Description
This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 7.9e-17 1.3e-13 50.5 0.0 1 43 434 477 434 479 0.95

Sequence Information

Coding Sequence
atgtcAAAAACAACGCCGGCAGCGTCACCATCGCCTCCGTTGCGATCGGTGAGCCGACATCAATCGcctcaattgaaacaaaattcaatcgattcatcAATTCATCGTAAATCGTCAGAGACGATTTGTGATTCACCGACCGATTTTCAATTGCTTGCCACCAAATCCACCGATGCATATCAAGATGATGAACCATTTTCAGCAAATTTATCAACACCAACAATTGATATTGATGCTGATAATATATGCGATAAAATCACCGTGAACACGGCACATCAGCAATTTTGCCTGCGCTGGAATAATTATGGTCGCAATTTAACGAATGTATTCGATCAACTGTTGCAGAATGAGTCTTTTGTTGATGTTACACTTGCATGTGATGGACAATCAATAAAGGCCCATAAAATGGTGCTATCGGCCTGTTCACCGTACTTTCAAAGTCTATTTTTTGATAATCCATGTCAACATCCAATCATTATAATGCGTGATGTCAAATGGACTGAATTGAAGGCGATCGTTGAATTTATGTACAAAGGTGAAATTAAGGTGAGCCAAGCTGAAATCGGGCCGTTGTTACGTGTCgctgaaatgttaaaaatacgCGGCCTAACCGAAGTCAATGGTGAACACGATTTACATTCCGATACGAAAAAAACACGTTGCGATAGTCCACGACCATCGTCCGAGCAACGAGCTGAAACACCATCGATAAAACAGATACGGCCACAGCTCAAACGATTGTCCGCCGAATGGGATGAAAATCAAAGTAACAATTCACCGCCATTAGAAAAGCATCGACGGTCAAAGCGATCATCACCAGCGTTCGATCGTCGTTCAACAGACAGTCCTAGAATTGATACAGCGACGGCAAATGAATTCCCCAAAAATACCAATGCCGCACAATTGACATCGTCAACgtcaaaaattcgaaacaatATATCGccatcgtcgtcgtcatcgtcggcGGCAGCAGCGGCAGCGGTGGCGGCTGGACGTCATACGACCAACATTAGTACACCATTGTTTCCAATATCATCACAAACATCAGTTGATCCATTGGCGTCATTAACAACTACTGAAGAGATGGAAATTAAGCCCGGCATTGCCGAAATGATACGTGAAGAAGAACGGGCAAAAGTCTTGGAAAACTCACAAACATGGCCTGGTGTTCCGTCAACCAATGCGCTGGCTGAAAGTTATCAGTATCAATTACAATCGATGTGGCAAAAATGTTGGAGTACAAATCAAAATCTCGTCCATAATTTGAGATTTCGTGAGCGTGGCCCACTGAAATCATGGCGCCCAGAAACAATGGCTGAAGCGATTTTTAGCGTTCTAAAAGATGGCTTATCATTATCACAAGCCGCACGTAAATATGACATTCCGTATCCAACATTTGTGCTGTATGCAAACCGTGTACACAATATGCTTGGACCGTCAATGGATTCTGGATTGGATTTACGGCCAAAAGGACGCGGTCGACCCCAACGCATTTTACTCGGAATTTGGCCAGATGATCATATAAAAGGTGTTATCAAAGCCGTTGTATTTCGCGATGCAAAAGATTTAAAAGACGACCCAAGTATACATTTAGCAGCAGCGGccgccgctgctgctgctgccgcttATGGCAGACAATCGCCGGTTTATCCGTTCCACGACGGTGCGATTCCTGGTTTTCATTCATCTCCAAATGGTTTAATGTCATCTAGCTCAGGAGCTAATGATTCTATTTCTTCCGAGGCAGCCGTCGCCATGGCCGCTGTAATGGGTCTGCGGcaacaacatttgaatgcTGCCGTCGCCAATCAACATCATTCCGAAACTGATTTgtccaattttaatttacgCTCAGATAGCGGCGGTGTAGGATGTTTGAAGCAGCCAAAATTGGGATCACCCGCCACATCTAGTCAACCGAGTAGccatgaaatgaattttccgATGCCACGATTAGCATCACCAGCTATACCAAATATTCATAGCATTAGTGGATTGTCGAGCTTGCATTTGATGCAACAGCATAATTTGAGCGGTAACAATGACCTCATATCAAATCGTACACGTAATCGCAGCAATGATGCCCGAACACCACCGCATACCGAAACATCAAAACATTGTCACACCGAATCGATGAgccgaaatgaaaaaccaaccCGACACccaaatgcaattgaacatCAGCTAAAGCATTTGAATAAAAGCACATcaagtagcagcagcagcagtaacaacaacaacaataataacaataacaacaccaaGGACACATCGGACCAAGTGAACAGTCCGGGGGTTGagaagcaaataaatttccCGATCGATGATTTTGATTCAGTTGGCGTTGATATTGCCATCAATGGTCTGCCGTTTAAATCATCTTTGCATGGATTTTTAGCGTCAACATCACCCAACGACGATCCACCATTGTTCACCGATGAGCTCAACGATTTCGATGAATCGCAACCAAGTCCAAACTCAAATACCAGAGACAAAATCAAGATGGAACCATTGACTGAATGTCGAGGTCAGTAA
Protein Sequence
MSKTTPAASPSPPLRSVSRHQSPQLKQNSIDSSIHRKSSETICDSPTDFQLLATKSTDAYQDDEPFSANLSTPTIDIDADNICDKITVNTAHQQFCLRWNNYGRNLTNVFDQLLQNESFVDVTLACDGQSIKAHKMVLSACSPYFQSLFFDNPCQHPIIIMRDVKWTELKAIVEFMYKGEIKVSQAEIGPLLRVAEMLKIRGLTEVNGEHDLHSDTKKTRCDSPRPSSEQRAETPSIKQIRPQLKRLSAEWDENQSNNSPPLEKHRRSKRSSPAFDRRSTDSPRIDTATANEFPKNTNAAQLTSSTSKIRNNISPSSSSSSAAAAAAVAAGRHTTNISTPLFPISSQTSVDPLASLTTTEEMEIKPGIAEMIREEERAKVLENSQTWPGVPSTNALAESYQYQLQSMWQKCWSTNQNLVHNLRFRERGPLKSWRPETMAEAIFSVLKDGLSLSQAARKYDIPYPTFVLYANRVHNMLGPSMDSGLDLRPKGRGRPQRILLGIWPDDHIKGVIKAVVFRDAKDLKDDPSIHLAAAAAAAAAAAYGRQSPVYPFHDGAIPGFHSSPNGLMSSSSGANDSISSEAAVAMAAVMGLRQQHLNAAVANQHHSETDLSNFNLRSDSGGVGCLKQPKLGSPATSSQPSSHEMNFPMPRLASPAIPNIHSISGLSSLHLMQQHNLSGNNDLISNRTRNRSNDARTPPHTETSKHCHTESMSRNEKPTRHPNAIEHQLKHLNKSTSSSSSSSNNNNNNNNNNTKDTSDQVNSPGVEKQINFPIDDFDSVGVDIAINGLPFKSSLHGFLASTSPNDDPPLFTDELNDFDESQPSPNSNTRDKIKMEPLTECRGQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01350613;
90% Identity
iTF_00133362;
80% Identity
iTF_00133362;