Aaph005545.1
Basic Information
- Insect
- Aphidoletes aphidimyza
- Gene Symbol
- kn
- Assembly
- GCA_030463065.1
- Location
- CM059997.1:9947384-9965553[-]
Transcription Factor Domain
- TF Family
- COE
- Domain
- COE domain
- PFAM
- AnimalTFDB
- TF Group
- Helix-turn-helix
- Description
- This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2.1e-90 1.4e-86 291.3 0.1 11 183 74 233 65 236 0.93
Sequence Information
- Coding Sequence
- atgagCGATGACAATAAAACAACCAGCCCAAGAGTGGTTGATAACGGCTTAAAGCTGCGTTCCGACGAACCAGTGCCGGGCTGTTTCAGCTCGGCGTCACCATGGCCAACACTCGAATTGGAATGGGGACGAAAATTATATCCATCATCAGGACCACGAAGCAGCAGTTTAATGTTCATTCCGCCCGgtgatttaaatcaaaatcgtGGCCCGATCACATCGCTGAAAGAAGAACCGCTCGGTACACGGGCATGGATGCAaccaacacaacaaattaaCCTTGGTATCGGACGTGCCCATTTCGAAAAACAGCCACCCAGTAATCTACGAAAATCAAACTTTTTCCACTTTGTGATTGCATTGTATGATCGAAGCGAGCAGCCAATTGAAATCGAACGTACTGCCTTCATTGGATTTATCGAAAAAGATCAGGAAACTGACagtacaaaaacaaacaatggaattcaatATCGACTGCAATTACTCTATGCGAATGGTGCTAGACAGGAACAGGACATATTCGTGCGGCTGATCGACTCACAAACGAAGCAGGCCATTATTTACGAAGGACAAGACAAAAATCCGGAAATGTGCAGAGTTTTACTAACTCACGAAGTAATGTGCAGTCGATGCTGTGACAAGAAAAGCTGCGGAAACCGAAATGAAACACCGTCAGATCCAGTGATTATAGATAGGTATGTCGAAGTTATATAA
- Protein Sequence
- MSDDNKTTSPRVVDNGLKLRSDEPVPGCFSSASPWPTLELEWGRKLYPSSGPRSSSLMFIPPGDLNQNRGPITSLKEEPLGTRAWMQPTQQINLGIGRAHFEKQPPSNLRKSNFFHFVIALYDRSEQPIEIERTAFIGFIEKDQETDSTKTNNGIQYRLQLLYANGARQEQDIFVRLIDSQTKQAIIYEGQDKNPEMCRVLLTHEVMCSRCCDKKSCGNRNETPSDPVIIDRYVEVI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00118478;
- 90% Identity
- -
- 80% Identity
- -