Agif005043.1
Basic Information
- Insect
- Aphidius gifuensis
- Gene Symbol
- nfxl1
- Assembly
- GCA_014905175.1
- Location
- CM026523.1:23196120-23199938[-]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 18 0.53 6.1e+03 -3.2 1.1 15 19 127 131 126 131 0.81 2 18 0.072 8.3e+02 -0.5 0.8 4 10 162 168 161 168 0.95 3 18 6.4e-09 7.3e-05 22.1 15.9 1 19 176 193 176 193 0.99 4 18 2.2e-05 0.25 10.8 13.9 3 18 231 246 230 247 0.94 5 18 0.22 2.5e+03 -2.0 1.4 5 10 271 276 271 276 0.94 6 18 0.008 92 2.6 8.9 1 19 282 303 282 304 0.73 7 18 0.44 5.1e+03 -3.0 0.9 5 10 328 333 328 333 0.93 8 18 3.9e-06 0.044 13.2 11.3 1 18 339 356 339 357 0.97 9 18 0.0034 39 3.8 7.6 1 12 391 402 391 402 0.94 10 18 0.93 1.1e+04 -4.0 1.3 6 10 412 416 412 416 0.96 11 18 1.3e-07 0.0015 17.9 15.8 1 19 422 440 422 440 0.93 12 18 0.68 7.8e+03 -3.6 0.7 6 10 469 473 468 473 0.88 13 18 0.002 23 4.5 6.7 9 19 488 498 486 498 0.90 14 18 0.0052 60 3.2 7.9 1 12 508 518 508 518 0.95 15 18 0.43 4.9e+03 -2.9 5.8 14 18 549 553 549 554 0.89 16 18 0.0032 36 3.9 12.3 1 12 590 601 580 615 0.79 17 18 1 1.1e+04 -5.3 14.5 4 18 624 643 622 644 0.66 18 18 2.5e-06 0.029 13.8 8.2 1 16 689 703 689 708 0.95
Sequence Information
- Coding Sequence
- atgaaaaaattcaagaggGCACAAGCCCAAAATCAAGCATCAATAGCAAAACACTTGAgtgttaataaatcaattgaatcatcaaGTGATGAAGAGAATGATGCGACAAATgaacaacatcaacaagcaTTTACCAAAGCATTATCACCATATGAATCAGAAGGTGGTGATTCACAAGCAGCATTGTCACATCTTACAGATGTATTTCAATTTGGTGGAGCAGTTTGTTTAATTTGCATTTCAACTGTTAAAAAAACTGATGCTatATGGAGTTGTTCAACATGTTATTCATCAATGCATTTATCTTGTATACAACACTGGATACGGGATAGTCTTTCttataaacatgaaaaagGTATTGTTAATCCACTCTGGGCATGTCCAAAGTGTCGTACTGATTATCCAGAGAATGatataccaaaaaaatatgaatgttTTTGTGGTAAAACAATTGATCCACCACATCAACCATGGGCTATTCCACATTCATGTGGTGAAACAtgtgaaaaatcattaaaaccaTATTGTGGACATAATTGTATACTTTTATGTCATCCTGGACCTTGTCCACCATGTCCAAAAATGATAACAGTATCTTGTCATTGTGGTAAACAATCACCAATACCTAGAAGATGTAATGCAAAATTTTGGTCTTGTAAAACTGAAtgctataaaaaattacctaaTTGTAATCATCCTTGTTCAGTGGAGTGTCATTCAGGTATTTGTCCACCATGcaacaaagaaataatatcaCACTGTCAttgtttatcatcaaaaaaaattatgaaatgttATGAATCAAAATGGAAGtgtgaaaaaatatgtaataaattattaccatgtaaaattcataattgTAATGGTGTATGTCATAGTTCAAATGGTGATGATTGTGGTGAATGTCCAACAGCTAAAAATCGTTCTTGTCCAtgtggtaaaaaatattataatgtatCATGTGAAGTAACGACTGTATCAACATGTAATGATACATGTGGAAAAATTCTTGATTGTGGTAGacataaatgtaataataaatgtcattATGATAAATGTGGACAGtgtcttgaaaaaattgaaaaaatatgtaaatgtaATTCATTTACAAAAGAAATTGCATGTAATAAAGAATatcattgtaataaaaaatgttcacAATTACGTCAATGTGGTAGACatttgtgtaataaaaaatgttgtgattgtttaaaaaaaaatacatttaatgtTTGTGAAAAAATATGTGATAATATGTTAAATTGTCGTAAACATAAATGTCCAGCACCATGTCATAGTGGACCATGTTATCCATGTCCacgtacaataataatacaatgtcGTTGTGGTAATAGTAAAATAACAGTACCATGTGGtactaaaaaaagaataaaaccaCCACCATGTAATAAACTTTGCAAATTACCACCAATATGTCATCATGTTAAACAAGATTCACATAAATGTCATACATCTGATTGTCCaccttgtaaaaaaatatgtgataTTGTACGTGATAAATGTGGTCATAAATGTGTTGTAACATGTCATACAAAAGTATGGGTCAAAGTTAGAGTTAATGGTACAGCACAACCAGCTGGACCATgggaaatattaaaagaaaaattagaattaaaaacatttccaTGTCCACCTTGTGAAGTATCAATGATGGTAACTTGTATTGGTGAACATGAGACAAAACCATGGCCATGTTATAAAGCAATACCAACATCATGTGGACGTACATGTGGACAATTGCTTAATTGTACAAATCACAAGTGTCAATTAATTTGTCATAAagttgaaaatgataattgtcAACAGTGTGAATTACCATGTCAATTTGAAAGAACACCTGGATGTACTCATCTTTGTTCAAAACCATGTCATAAAAAAGTTTCTAAAACAGTTAATTGTCCACCTTGTCAACAAATGGTCAAAATATCATGTCATTGTGGATTAAATAGTCTTTATAAAAGATGCTATGAAATTACAACAGCCAAAGGTAAAACACGTGATGATATGCTTAAATGTGGCAATCAATgtccaaaaataaatacatgtgGTCATCGTTGTATTGATGATTGTCATTCAGGTAATTGTAAAGAttcaatttattgtaataaacgTATTAAAATTACCTGTAAATGccaaagaattaaaaaatcagcAATTTGTTCTGATGTACAAAAaggtaatattaaaattaattgtgatgatgattgtattgctgctaaaattgaaaaagataaattacgtgaaattgaaatttctaaaaagaaaaaacaagaagaaattaaaaatcaaattgaagTTGAACGTTTTGAGAGAAAATTTAAACCCAAGAAAAAAGGTAAAGATCGATATGAATCCAGTGGAGAATTACAACAtgataatcataattttattaaaaaaataattttgtttggaattgtttttattgctATTGCTATTGTTGCTATTTATATGACTGatggtttttaa
- Protein Sequence
- MKKFKRAQAQNQASIAKHLSVNKSIESSSDEENDATNEQHQQAFTKALSPYESEGGDSQAALSHLTDVFQFGGAVCLICISTVKKTDAIWSCSTCYSSMHLSCIQHWIRDSLSYKHEKGIVNPLWACPKCRTDYPENDIPKKYECFCGKTIDPPHQPWAIPHSCGETCEKSLKPYCGHNCILLCHPGPCPPCPKMITVSCHCGKQSPIPRRCNAKFWSCKTECYKKLPNCNHPCSVECHSGICPPCNKEIISHCHCLSSKKIMKCYESKWKCEKICNKLLPCKIHNCNGVCHSSNGDDCGECPTAKNRSCPCGKKYYNVSCEVTTVSTCNDTCGKILDCGRHKCNNKCHYDKCGQCLEKIEKICKCNSFTKEIACNKEYHCNKKCSQLRQCGRHLCNKKCCDCLKKNTFNVCEKICDNMLNCRKHKCPAPCHSGPCYPCPRTIIIQCRCGNSKITVPCGTKKRIKPPPCNKLCKLPPICHHVKQDSHKCHTSDCPPCKKICDIVRDKCGHKCVVTCHTKVWVKVRVNGTAQPAGPWEILKEKLELKTFPCPPCEVSMMVTCIGEHETKPWPCYKAIPTSCGRTCGQLLNCTNHKCQLICHKVENDNCQQCELPCQFERTPGCTHLCSKPCHKKVSKTVNCPPCQQMVKISCHCGLNSLYKRCYEITTAKGKTRDDMLKCGNQCPKINTCGHRCIDDCHSGNCKDSIYCNKRIKITCKCQRIKKSAICSDVQKGNIKINCDDDCIAAKIEKDKLREIEISKKKKQEEIKNQIEVERFERKFKPKKKGKDRYESSGELQHDNHNFIKKIILFGIVFIAIAIVAIYMTDGF
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00131651; iTF_00132336;
- 90% Identity
- iTF_00132336;
- 80% Identity
- -