Basic Information

Insect: Aphidius gifuensis
Gene Symbol: -
Assembly: GCA_014905175.1
Location: CM026521.1:3273240-3277740[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 0.00013 0.011 15.5 2.1 1 23 490 512 490 512 0.96

2 18 6.4e-06 0.00056 19.6 1.3 1 20 518 537 518 540 0.94

3 18 7e-06 0.00062 19.5 0.9 1 23 546 568 546 568 0.98

4 18 4.6e-05 0.0041 16.9 4.4 1 21 574 594 574 596 0.95

5 18 1.4e-05 0.0013 18.5 4.6 1 23 602 624 602 624 0.99

6 18 1.8e-05 0.0016 18.2 5.0 1 23 630 652 630 652 0.96

7 18 1.8e-07 1.6e-05 24.5 4.3 1 23 658 680 658 680 0.98

8 18 5.3e-08 4.7e-06 26.2 2.7 1 23 686 708 686 708 0.98

9 18 3.9e-05 0.0034 17.1 6.7 1 23 714 736 714 736 0.97

10 18 1.2e-05 0.0011 18.7 5.8 1 23 742 764 742 764 0.98

11 18 3.2e-07 2.8e-05 23.7 2.9 1 23 770 792 770 792 0.98

12 18 4.8e-06 0.00042 20.0 7.8 1 23 798 820 798 820 0.98

13 18 1.5e-05 0.0013 18.4 9.1 1 23 826 848 826 848 0.98

14 18 2e-05 0.0017 18.1 7.5 1 23 854 876 854 876 0.98

15 18 0.00095 0.084 12.8 8.8 1 21 882 902 882 904 0.94

16 18 7.2e-06 0.00064 19.4 0.4 1 23 910 932 910 932 0.98

17 18 0.017 1.5 8.8 4.5 1 23 942 964 942 964 0.98

18 18 2.8e-07 2.5e-05 23.9 1.3 1 23 970 992 970 992 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	0.00013	0.011	15.5	2.1	1	23	490	512	490	512	0.96
2	18	6.4e-06	0.00056	19.6	1.3	1	20	518	537	518	540	0.94
3	18	7e-06	0.00062	19.5	0.9	1	23	546	568	546	568	0.98
4	18	4.6e-05	0.0041	16.9	4.4	1	21	574	594	574	596	0.95
5	18	1.4e-05	0.0013	18.5	4.6	1	23	602	624	602	624	0.99
6	18	1.8e-05	0.0016	18.2	5.0	1	23	630	652	630	652	0.96
7	18	1.8e-07	1.6e-05	24.5	4.3	1	23	658	680	658	680	0.98
8	18	5.3e-08	4.7e-06	26.2	2.7	1	23	686	708	686	708	0.98
9	18	3.9e-05	0.0034	17.1	6.7	1	23	714	736	714	736	0.97
10	18	1.2e-05	0.0011	18.7	5.8	1	23	742	764	742	764	0.98
11	18	3.2e-07	2.8e-05	23.7	2.9	1	23	770	792	770	792	0.98
12	18	4.8e-06	0.00042	20.0	7.8	1	23	798	820	798	820	0.98
13	18	1.5e-05	0.0013	18.4	9.1	1	23	826	848	826	848	0.98
14	18	2e-05	0.0017	18.1	7.5	1	23	854	876	854	876	0.98
15	18	0.00095	0.084	12.8	8.8	1	21	882	902	882	904	0.94
16	18	7.2e-06	0.00064	19.4	0.4	1	23	910	932	910	932	0.98
17	18	0.017	1.5	8.8	4.5	1	23	942	964	942	964	0.98
18	18	2.8e-07	2.5e-05	23.9	1.3	1	23	970	992	970	992	0.97

Sequence Information

Coding Sequence: ATGAATAGTGAACAACATGCCTTGCCAGCGACGTCGCAGGCACAAGAGGGAATAAACACGATTGGCCAAAATGCTCATCGTTCTTCTTTTCGTATTGATTtggaaaatacaacaacaactacaacaacaacaataacaacaccatcatcatcgtcattatcatcaacaacaagtgTTGGTTATATTGGCAATGCAATTCAACATTCATCTGATGATCGTCGTGTAGGTACAGCAGATGTTACATTAGCATCATCAGTAGCTAAATATTTAGTACTGACTCATTTTTTTCCTGGACAAATACCACAAGTTTATCAACAatcacaaacaaataataatcaaagaatAAATGATAGTAATCAATTATTGACAAAAGAATCAATAACAGCATTGACACAAAATATGgaaatgtcaaataataattcacaacatcaaacaataattacaacatcacaacaacaacaacaacaacaacaacaacaacaacaacaacaacaacaacaacaacaacaacatcatcatcaaccgACAATTACAACAAGCAGTCATCACACTACACTTCAATCGACTGCGCAGATACCTGTGTCATTACCTGGTTTAACACTTGATACATCACACATACAAGCCAGTCATTTACAGGTAACACACGCCCAAATGCAACAACAATTGCAATCACAACAGCAACAGTTGCATGcccaacaacagcaacaacaacagcagcaacagcagcagcagcaacaacaacagcaagcACATCATCAAATGCAAGCTCATCAAAATGCCCAGAATAATGTATCAAATTCACAAAATCAATCTGTCAATCAAGCAGGAGATCATAAAGTAAAAGATGAAGGTGGTAGCTGTACAACTGAACGATGCAGTGATAGCCAAGTTCATTGTCAAGTACAATGTGATCTTCAACTTCAACCTCAACAAGATTTACAACAAACATTGATgcaacaacaaaatcaacaacaacaaattagTGTTGGTATCAGTGGTGGTAATTCAACAACCACtgttaatcaaaataattctgATAAACCAGACAAAGAAAAAGATATTATAAGACAACAAATTATGACACAATTTCAAGTACCAGAACTTAAACCAGGTGGTCATATGATGGATGTAAGAACAGCTGATGGTTCTGTTGTTAAAATAAGTGCAGGAAATGAACAAGATCTTGCTAAAACACTTGGTGCAGAAATGGTACAGAATATGTataaggttaatgttgatgatttaaatcaaatattggCATATCATGAAGTATTTGGTAAACTTCAAAGTGAAATTGCTGCTGGTACAACACTTGTTAGTAGTGCAGTACCAACTCAAACAGTTGCAACAATACAAAATGGTGCAACACAAATTGCACAATcagtacaattaaataaatttgaattaaaaacagTTGATGGTGAAGTTGCACCTGGACCAAGTGGTTCACCAGTATCAGCTGGTAGTCATGCATGTGATACTTGtggtaaaatatttcaatttcgTTATCAGCTTATTGTACACAGACGTTATCACAATGAACGTAAACCATTTACATGTCAAGTTTGTGGTAAAGCTTTTACCAATGCTGCTGATTTGACTCGTCATGGTAAATGTCATTTAGGTGGTTCAATGTTTACTTGTGAAGTATGCTTTCATGTATTTGCAAATGCACCATCACTTGAACGTCACATGAAACGTCATGCAACTGATAAACCATACAATTGTACTGTATGTGGTAAAAGTTTTGCAAGAAAAGAACATCTTGATAATCATACTAGATGTCACACTGGTGAAACACCCTACagatgtCAATATTGTGCTAAAACTTTTACAAGAAAAGAACATATGGTTAATCATGTACGTAAACATACTGGTGAGACTCCACATCGTTgtgaaatatgtaaaaaaagttttacccGTAAAGAACATTTTATGAATCACGTATTGTGGCATACTGGTGAGACACCACATCAATGTGAAGTTTgtggtaaaaaatatacacgcAAAGAACATCTTGCAAATCATATGCGATCACATACAAATGATACACCATTTCGTTGTGAAATATGTGgcaaGTCATTTACGAGGAAAGAGCATTTTACGAATCACATAATGTGGCATACTGGTGAAACACCTCATCGTTGTGATTTTTGCTCAAAAACATTTACAAGAAAGGAACATTTATTGAATCATGTACGGCAACACACCGGAGAGTCACCTCATCGTTGTGGTTTTTGTTCAAAATCATTTACCAGAAAGGAACATCTTGTTAATCACATTCGTCAGCATACAGGTGAAACTCCATTTCGTTGTCAGTATTGTCCAAAAGCATTTACTCGTAAGGATCACTTGGTAAATCATGTCAGGCAGCATACAGGTGAATCACCACACAAGTGCCAGTATTGCACAAAATCATTTACAAGAAAGGAACATTTGACAAATCACGTACGTCAACATACAGGTGAATCGCCACATCGTTGTCATTTTTGTTCAAAGTCATTTACACGTAAGGAACATTTAACAAATCATGTAAGAATTCATACTGGTGAATCACCACATCGTTGTGAATTTTGTCAACGTACATTTACAAGAAAAGAACATCTTAATAATCATTTACGTCAACATACTGGTGATTCTTCACATTGTTGCAATGTTTGCTCCAAGCCATTTACAAGAAAGGAACACTTGGTAAATCATATGCGATGTCATACTGGTGAACGTCCATTTGTTTGTACCGAATGTGGTAAAAGTTTTCCATTAAAAGGAAATCTTCTATTTCATATGCGTTCACATAATAAAGGCAGTACTGCTGAACGTCCATTCCGCTGTGATTTATGCCCAAAAGATTTTATGTGTAAAGGACACTTGGTGTCACATCGTCGTTCACATTCAGATGAAAGACCACACAGTTGTCCTGATTGTGGTAAAACATTTGTTGAAAAAGGTAATATGCTTAGACATTTAAGAAAACATGCTGCTGAAGGTTTACCAACACAAGTACCAATACAAGTACCAACACAAGTTACAACACCAGCAACAATATCACAAACTGGTGTTATACCAATACCAATACCATTATCAACAACTGCTGCAGTACTTGTTAGTCATCAATTAacacaacagcaacaacagcaacagcagcagcaacaacaacaacaacagcagcagcagcaacaacaacagcaacaacaacagcagcagcaacaacaacaaccaacaacaacaacaccagttGTACCACAACACACTGTTGTTGTACCTACACCACCTGGTGTACTTAcatcatattaa
Protein Sequence: MNSEQHALPATSQAQEGINTIGQNAHRSSFRIDLENTTTTTTTTITTPSSSSLSSTTSVGYIGNAIQHSSDDRRVGTADVTLASSVAKYLVLTHFFPGQIPQVYQQSQTNNNQRINDSNQLLTKESITALTQNMEMSNNNSQHQTIITTSQQQQQQQQQQQQQQQQQQQQHHHQPTITTSSHHTTLQSTAQIPVSLPGLTLDTSHIQASHLQVTHAQMQQQLQSQQQQLHAQQQQQQQQQQQQQQQQQQAHHQMQAHQNAQNNVSNSQNQSVNQAGDHKVKDEGGSCTTERCSDSQVHCQVQCDLQLQPQQDLQQTLMQQQNQQQQISVGISGGNSTTTVNQNNSDKPDKEKDIIRQQIMTQFQVPELKPGGHMMDVRTADGSVVKISAGNEQDLAKTLGAEMVQNMYKVNVDDLNQILAYHEVFGKLQSEIAAGTTLVSSAVPTQTVATIQNGATQIAQSVQLNKFELKTVDGEVAPGPSGSPVSAGSHACDTCGKIFQFRYQLIVHRRYHNERKPFTCQVCGKAFTNAADLTRHGKCHLGGSMFTCEVCFHVFANAPSLERHMKRHATDKPYNCTVCGKSFARKEHLDNHTRCHTGETPYRCQYCAKTFTRKEHMVNHVRKHTGETPHRCEICKKSFTRKEHFMNHVLWHTGETPHQCEVCGKKYTRKEHLANHMRSHTNDTPFRCEICGKSFTRKEHFTNHIMWHTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHRCGFCSKSFTRKEHLVNHIRQHTGETPFRCQYCPKAFTRKDHLVNHVRQHTGESPHKCQYCTKSFTRKEHLTNHVRQHTGESPHRCHFCSKSFTRKEHLTNHVRIHTGESPHRCEFCQRTFTRKEHLNNHLRQHTGDSSHCCNVCSKPFTRKEHLVNHMRCHTGERPFVCTECGKSFPLKGNLLFHMRSHNKGSTAERPFRCDLCPKDFMCKGHLVSHRRSHSDERPHSCPDCGKTFVEKGNMLRHLRKHAAEGLPTQVPIQVPTQVTTPATISQTGVIPIPIPLSTTAAVLVSHQLTQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQPTTTTPVVPQHTVVVPTPPGVLTSY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: iTF_00131457;
80% Identity: -