Basic Information

Gene Symbol
NCOR1
Assembly
GCA_014905175.1
Location
CM026524.1:10976347-11067871[-]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 1.8e-06 0.0016 17.9 0.1 3 43 614 654 612 657 0.94
2 2 2.1e-13 1.8e-10 40.1 0.9 3 46 1074 1117 1072 1117 0.97

Sequence Information

Coding Sequence
ATGGAGACAGTTGGTAAGCAAGTCCAGGTAGTGAGTGGGCTGGCAGTAGTTGGACCAGTAGGTGGCGATCtgcatcaccatcatcattcCAATTCTCACGGCACTCACAGCCACTCACTGGCTGGTAGTACATCTACTCATTCTCGAGTACTGACCCAATCCCTTCAAGGTCCACCACCATCCTCACACAATCAGCATTTATCTCCAAGATCAACACCAGTCCAGCATCACAGATCAGCTCAGAATTACATCAACCTTAAAAGTAACAGTCCAGTATCACCTCGGACAGTAGGCGGAAGTGGCTATCCTCAAACGTCTTCTTCCGCAGCATCTTCCATTAGTGACGGAGTCGTTCCAACTGGAAATGTAAGTGTCCCCGGAACACCGGGAAGTATTATTGCTAGCACGGCGAATAGTAATTTCGTGACCGTACCAGTGCCGTGCGGTCTTCGCTATATGCATGGCTATCCTCAACCGTCTGTTTCTGCATCATCTTCCGCATCGGTTGATCAAACCTCACCACCTTCAAGTGGCCTAACGGCATACACGAGGGTTGATTCTTACAGAAATGCTACATCAAATGTTTCTGAGAGAGGAGCAATAAGTGTCAACAGCTGTCCAGTTTCTCAAGTTGGTATTGGAGGGGGCACAACTGACTACAGCCTTGGACGTAGTGATCGTCCCCGTATTTCTTTGCTACCATCAGTCTCGGTGGCACTGGTCTCATCACCGGCTAGTGCCAATGAGTACCACATAACAAGTGTACGTAACCAGCGTGGACTTATGGAAAATACTGTTGACCAGTACAGTAATAGAGCTATTGATATATCATTGCAGGAGGCACCgccttttaaaaaaattcggCTGGGTCACTCCCAGCCTCAGTCACCTTGTCAGACCATCTTGCAAACTGATATATCTATTAAACAAGAACATGTACAGCTTTCGCAACCACTTAGGATTGATACGAGGCCGGCAACCGGGGCCTATACGCCCCAAACCGAAGCGATTTCACCAACTCTGCCGGAAACAACGACCCAAGAAGACGCACAGTTCCGGAGCACGAAAGATGATTTGTTGCAGCAAATTGCCAAAGTCGATCGGGAGATTGCTAAACGAGAATCTCAGATCAGTAAACTTCGAAAGAAACTCAAAGAATTGGAGGAAACTGCAAGTATGCCACTTGACACAAGTGGTATTAAAAGACCTGTTGAAGAACTTTTGCAGCCAAAACATCAGTCGTtagctcaaaaaatttatgcTGAAAATAGGAAAAAATCGGAAGAAGCTCATCGATTACTAGATAAGTTGGGATCTAACGTAGAACTGCCAATATATAATCAACCTTCagatacaaatatttatcaagataataaaaCAAGACATCAGACGTCTATAAGGACACGGCTTGTAGCTAGATTACGTAGAGAGCATTCTGAACGTGCCTCACTCCATCATCAACAATCGCAAACATATGCGATTCTCGTTCAGGAATGGCATCGAAAAATCGATAGACTTGAAGCTGCTCAAAAAAGAAGGTCGAAAGAAGTTAAAAACcgtgaattttttgaaaaagtttttcCAGAATTAAGAAAACAACGAGAAGACAAAGAAAGATTCAATAGAGTTGGAGCTCGTATTAAAAGTGAAGCTGATCTTGAAGAGATAATGGATGGTCTTCAAGAACAAGAGATGGAGGACAAGAAGATGCGCTCATATGCTGTTATTCCTCCTCTTTTACTTGATGTTAGACAACGGAAAATTGCATTTCAAAATCGTAACGGTTTGCTTCAACCTGAAGAACTTGAAACACTTCATAGTGAACGTAAACTTATGAATGTGTGGAATACGATTGAACATGAGTcgttcaaagaaaaataccTTCAGCATCCTAAAAATTTTGGAATCATCGCGCAATCGCTCGAACATAAGTCAGTTCAAGATTGTGTGCATCACTACTACCTCACGAAAAAAGCTGAAAACTACAAACAGTTGTTGCGGAAATCACGACAACGAACACGTAGCTCTCGAAATAATCCTAATAACAAGgttaACAATGCTAACTCGAGTATTGGACACATTGATATATTAACAACAGGCGTTACAACGAGACTTCAGCGAGAACAACAACAGAAAACACAAGAAAATCCACAAAATAATTCAGGGTCTTCGTCAACGTCGTCGGCGGCAACTATCAGTCCAGTTACGACATCGAGTGCAACAACACCGATTACTAACTCTTCAACATTAAGTACAACATTGATCACCACTATTTCACTCAGTTCGAATTCGCAATCACCTCCCACAACTTGTCAGACCAGCACAAATACAACGATCGATTCAATCGTGATAACAAAAACAACTCCTACACCTTCGACTGTCCAGAGCATGAACAGTATTTTGACAGCGGTGACTGCAACGGTAAATATTTCTTCGGGAATAAAAGAAGTCAGAGAAACAAACAAAGATAATAAGGATAATAAAGAAAACACAAATGATAttactgtaaaaaattataacaatgatTCCGAAGAAGATACGACGAAAAAAGATTTCAATGaGTCTTTAAGTTCAGATTTGTCGTCATCTGTAAATGTTGTTCGAGTGAATGAAAATACTCTACATTCATCTGATataacagagaaaaaaaaacaaagtattaATACGACTACTGGATGTGTCACTGGCAGTACTCGGtcgaaagaaaagaaaaaagaaaagcatCCAACAGCCATGGAAACTAGTGACGAGGATGCGCAAGCTATCATTGACACGATGGAAAGCGGAAGACAGCTAGGCCCACATGGTTGTGCAATTTGCCAAAACATAGTAGAAGGTGGAAATCAAAGCCGTGTACTTTCTAGTAGCCAAGCATCACAGTACGGTTTACGCGAGGAACAGATCCAGCCTGGAGCTCGTGTTTGTAACACATGTAGATGCAAAGCCGTTCGGGGTCGATACACTGCCTGCCCATTACCTGGATGTCCAAATGCCACCAATGCTAACGTAAAAAGTCGTGTTAAACGTCTTCGTGCGTTGCCATCAAAATGGATGGAACTGCCACCAGAAATACGAGATCCAGTGATTCAAGAATTTCAAATATCCAACAATGTGACAAAATGTTGCTCAGCATGCTTTAATCGCATATCGCGCCGCCTGGCGCCACATGTAACTAGTGGTACCGAAACACCTGACGAAGGTTCTGAGTTTCTTGCTCGTCAGTGGAACGAAGATGAGCTAAAACGATTACGACGTGCTCTGCGAGAACATGGCACGAATTGGCCTAAAGTATCTGAACAAATACCTGACAAATCAAATCATCAATGCAAAAATTATTACCTTACGTATAGGAAAAAACTAGGCTTGGACCAAGTTGTTGCTGAGTATTATCAGTCATTGGGGGAGGAAAGAAGACCCTGCCTTACAGATGAAGAAGAAAGTGGCAGTAGCACAAGCAGCTGTGATGATACAGCAGTGCATGATTCTAGTGACACTGCGAGTGCTGCGAGTCCTGTTAATCCAATCTCAAGTAGCGGCACTCCACCAACCTTGATCACGGCATCCTCTACAGAAGTCCTTAATTCTAGTAATTCCAAGATCGTGACTACATTTCCTTTGAATAACAATTCTGCAGATGTTCGAATAACTCTTGTGCCACCAGCCGTGCCAGCTATCTCAACCCAACAAACAAATTCATCAACTAGTCAATTAACCAATGCTAGTGTTAGGGAAGACTACGACAGCTCTGCCACGGAGACGGCGGACGAGTGTCCGAGTGGTGCAGATATTGAAAATTCTAATGGATTAGCAAATTCAACAATCACAGGTAGTACAACTATTAATCCACAATCTTCTCAGCGTCAGAAACTATCAAGGGAATTTTCGCCAccatcaataacaacaataacaacaacaacaacaacaacaacaacggcATCAATCACGAGTAATGCAAATCCGATGACTGTCAAAGATCTCATGTGTGGTGTAATCGAAATGCAATTAAAACGTCCAGCTGGTGGTCCTTCGATACCGGTTAGCTCTGGCACTCCGACAATATCTTCAATTCTCAAGACAGATCACAGGAATGACATAACTTTTGTACGCGAATTTGCGCAATCTTCTTCCATGCCGCCGAATAGAGATTCGAATTTGGCCACACTCTCTGTTGTTTCTGGACCACACCATAGCCACAGATCAGCTCCACATCCTCAACAACTAACCCAAATACAAGCAACAATAACTCCTTGTCCACCAACAGGTGACGACGCGAGTAATCAGCAAGCTCAATTAACATCAGATTCTTTACCTAAAGAAGGTTTGGTCGTAATGCAAGTGCAACAAGCATTGCGAGAAACAGAAGGCACTTTAGATCTTAGTGTCAAAAAACCAAAGCAACAACTTTCAactcatcattatcaacaacaacaacaacaacaacaacaacaacaacaagaataTAATCACAGTCTCCAATCATCAGAAAACAAGACGTCGATTATTAGTGTTTTTCGATCAGAACCACCATCACCATCTGCTGCATATTATCATACTCATGGACACAGTGATCAAGGTCGAAGTGTTAAAAGTCCTCTTGTTCACTATATTTCATCACCTCGCCCTCCAGCTTCAATTACACctaaaatgaacaaaattaaTGTTCCACCCTCGCATCCTAAACTATCTCCTAAGTTGAGTAGTATTGTACCGAATCACAAAAGTGGATCCATAACTCATGGAACACCAGTATCTGGGGTGAGATATGAAGGTCTTTTGAGTCAAATGACACCACCTGGAAATGCAAGTGGAACTGGAGGTTCAACGCTACCGCTTAAAGAAAGTGGTTCCATCATTCAAGGTACACCAATTCATTCTTATCCAGTTGATAAAAGATCTTATGAGTATCATCGTTCAATGAGAAACTCACAGGCATCAAATGCACCGCTTGCTGGTCAGAGTCAGGGTGTTGTTGTTACTCATAGTAACTATAATTCCTATGCTCCAAGACCCTCACCGAGTTACACAATAGAACAACAGCTCTCGTCACgtcaaattattatgaatgatTACATAACTAGTCAACAGATGCATCATCGTGGACGTTCTACAACAAATCATGAAAGCTCTAGTAAAAATGAAACACCATCACCTTCAACGATATACTATACCACCACCccaccaccaccacaacaacaacaacaacaacaacaacaacaacaacaacaacaacaacaacaacaacaacaacaacaacaacaacaacaacaacaacaacaacaacaacaacaacaacaacaacaacaacaacagcaacaacaactacaacaacCAATAATTGTTCAAACCCCAACATCTCAGAGTCAATCTCATACAGCACCACGACAGGGTGTCATTCAGAGGCATAATCCTCAAAAGCAAATTAATTACTCTCCGACACCACCTAATCTCGATAATTGTGCGTTTACGAATTTAGTCGATGTTGCTGCACAACTGCCAAGCTTACCAGTACCCCAACCGCGTAGTCACTCTCCTTCCGGTGGTAGCCATGAAGGTCTCGGCAAAACAATGGCAGATCGTCTTCTAGCAGACCGATATGTTGATAACAATCGTGCTTTGCGTGAACAAGAAATTCGTTTACAACAGGAACAACAGCACCGTCTAGCAATACAACATGCAATGGCTCAACAGCAACATCACCAACAGCAGCAAGAACGTGATCGAGAGCGAGAAAAAGATTCGGCACATTTGCGTGACAAGGATGAACACAGAATAACACGTGAAAAGGATTTGCAACATATAGATCAGCAGCGCTTTTTGAAGGATAAAGAGCGTGAACTAATAAATCGCGATCAACATATATTGTCAGTTCAAATCAGAGAAAAAGAGGAAAATAGACTGCCAATTGCACGCGAAAATGATATACAGCTCAAAATTGCATCGTTAACTGCAGCACAGCGTGAAAAAGAGCATCAGGATCATCGATTGACGCTacagaaagaaaaagaacTTCAACATCAGCGTGAACAAATTGGAGTCGAGCATCAGCGTGAAAAACAAGAACATCTTATGGCTGCACAGCGGGAACGTGATTTGGgtagtcatcatcatcataatcatcatcttcttcaacaacaacaacaacaacaacaacaacaacaacaacaacaacaacaacaacaacaacaacaacaacaacaacaacaacaacaacaacaacaacaacaacaacaacaacaacaacaacaacaacaacaacaacaacaacaacaacaacaacaacaacaacaacaacaacaacaacaacaacaacaacaacaacaacaacaacaacaacaacaacaacaacaacaacaacaacagcaacaacaacaacaactacaacaacgacaacaacaacataatTTAGGACAGCAGCAAAATATGGAAGCTGATAGACATCAATCGAGCATGGTGCATATCTACCGAGATCAGCAGCATCATCATGACAGTGAGACGCAATCGAGACTCATTGGTACGGGCTTAAACCAGTCATCAAGAACATCTCAAccacatcaacaacaaacCTCTTCGCAACAAGTCACTCAACAGCCATCATCACGGCCAAGTCAGGTATCTTCTAATCAACAACCGACTGGCCAAGACGCCTCATCTACGCTGACAGCTGCCAGCCTCATCGATGCAATCATCACTCATCAGATTAATCAGAGTTTCAAGAGTGGTACGAGTACGCCGCTAGCAAATAGTCACACAAGACCAGGTGATCGTCTCTTCCAAGGCTTTCAACGTGAGAATCTGAATGAGCTGAATGGCGTGGTACACAGTTCGGCTAGCGAAGGAAACAGTGCAGTTCTAGGAGTGGGAGAAATTGTCCGAGAGGGAGAAAAAGCAACAGGCATTAGTGAACGTAATGATCATATTGGAACCAAAGACTATGGACCATCGCATCATAGTTCTTACAGATCATCATACCCAGGttatGCAATGGCGGAAGATCAATGGAAACGATCTGAGGGCATTGAGGTAGATTCTACCAAGTCAAACGATGAGCGTCAGATCATCCGTGTTTCGCAAGTGccgcatcatcatcatcatcatcaacaacaacaacaacaacaacaacaacaacaacaacaacaacaacaacaacaacaacaacaatctcAATCCTCATTGCAAACACACCAAACATCGACGAAGCAACTTCACGCAATCGAACCGGTGTTGCCACCTGATACTAACCCTAGCCATTATACACGGCGATTTTACGAAAACACGACGGCTACAACTACAACAACTTCAAGTAGCACGCCCTCAAAGTCTAACCTCTCGCCTTTTGATTATGTCAAGAACAAAATTGTTGAGGTCATGCGAACATCGGAAGATGATAAATCAGTGGCTTCCGATGACAAAGGCAATGTCAGTAATGGAAATGTTCAGGCCGACAAAGACAAGTCTGCTGAAAGTCCCACTGGGGACATGGTCATCGACGAAAATCCGAGTCAGTCTCAGCCACCACCATCATCTTCGACCACATCAAACTTTTATCCTTTCAATGCTCTCGGAGTTTCTACGGGACTACCTTCAGCTACAACACAACAACCAACAGGAAGCTCTAGTTCCTCAATTTCTATCAAATCCGAAAAAACTGAGCCGGCACCATTACTATCAGCGCAGTATGAACCGCTCTCTGATGAAGATTGA
Protein Sequence
METVGKQVQVVSGLAVVGPVGGDLHHHHHSNSHGTHSHSLAGSTSTHSRVLTQSLQGPPPSSHNQHLSPRSTPVQHHRSAQNYINLKSNSPVSPRTVGGSGYPQTSSSAASSISDGVVPTGNVSVPGTPGSIIASTANSNFVTVPVPCGLRYMHGYPQPSVSASSSASVDQTSPPSSGLTAYTRVDSYRNATSNVSERGAISVNSCPVSQVGIGGGTTDYSLGRSDRPRISLLPSVSVALVSSPASANEYHITSVRNQRGLMENTVDQYSNRAIDISLQEAPPFKKIRLGHSQPQSPCQTILQTDISIKQEHVQLSQPLRIDTRPATGAYTPQTEAISPTLPETTTQEDAQFRSTKDDLLQQIAKVDREIAKRESQISKLRKKLKELEETASMPLDTSGIKRPVEELLQPKHQSLAQKIYAENRKKSEEAHRLLDKLGSNVELPIYNQPSDTNIYQDNKTRHQTSIRTRLVARLRREHSERASLHHQQSQTYAILVQEWHRKIDRLEAAQKRRSKEVKNREFFEKVFPELRKQREDKERFNRVGARIKSEADLEEIMDGLQEQEMEDKKMRSYAVIPPLLLDVRQRKIAFQNRNGLLQPEELETLHSERKLMNVWNTIEHESFKEKYLQHPKNFGIIAQSLEHKSVQDCVHHYYLTKKAENYKQLLRKSRQRTRSSRNNPNNKVNNANSSIGHIDILTTGVTTRLQREQQQKTQENPQNNSGSSSTSSAATISPVTTSSATTPITNSSTLSTTLITTISLSSNSQSPPTTCQTSTNTTIDSIVITKTTPTPSTVQSMNSILTAVTATVNISSGIKEVRETNKDNKDNKENTNDITVKNYNNDSEEDTTKKDFNESLSSDLSSSVNVVRVNENTLHSSDITEKKKQSINTTTGCVTGSTRSKEKKKEKHPTAMETSDEDAQAIIDTMESGRQLGPHGCAICQNIVEGGNQSRVLSSSQASQYGLREEQIQPGARVCNTCRCKAVRGRYTACPLPGCPNATNANVKSRVKRLRALPSKWMELPPEIRDPVIQEFQISNNVTKCCSACFNRISRRLAPHVTSGTETPDEGSEFLARQWNEDELKRLRRALREHGTNWPKVSEQIPDKSNHQCKNYYLTYRKKLGLDQVVAEYYQSLGEERRPCLTDEEESGSSTSSCDDTAVHDSSDTASAASPVNPISSSGTPPTLITASSTEVLNSSNSKIVTTFPLNNNSADVRITLVPPAVPAISTQQTNSSTSQLTNASVREDYDSSATETADECPSGADIENSNGLANSTITGSTTINPQSSQRQKLSREFSPPSITTITTTTTTTTTASITSNANPMTVKDLMCGVIEMQLKRPAGGPSIPVSSGTPTISSILKTDHRNDITFVREFAQSSSMPPNRDSNLATLSVVSGPHHSHRSAPHPQQLTQIQATITPCPPTGDDASNQQAQLTSDSLPKEGLVVMQVQQALRETEGTLDLSVKKPKQQLSTHHYQQQQQQQQQQQQEYNHSLQSSENKTSIISVFRSEPPSPSAAYYHTHGHSDQGRSVKSPLVHYISSPRPPASITPKMNKINVPPSHPKLSPKLSSIVPNHKSGSITHGTPVSGVRYEGLLSQMTPPGNASGTGGSTLPLKESGSIIQGTPIHSYPVDKRSYEYHRSMRNSQASNAPLAGQSQGVVVTHSNYNSYAPRPSPSYTIEQQLSSRQIIMNDYITSQQMHHRGRSTTNHESSSKNETPSPSTIYYTTTPPPPQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQLQQPIIVQTPTSQSQSHTAPRQGVIQRHNPQKQINYSPTPPNLDNCAFTNLVDVAAQLPSLPVPQPRSHSPSGGSHEGLGKTMADRLLADRYVDNNRALREQEIRLQQEQQHRLAIQHAMAQQQHHQQQQERDREREKDSAHLRDKDEHRITREKDLQHIDQQRFLKDKERELINRDQHILSVQIREKEENRLPIARENDIQLKIASLTAAQREKEHQDHRLTLQKEKELQHQREQIGVEHQREKQEHLMAAQRERDLGSHHHHNHHLLQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQLQQRQQQHNLGQQQNMEADRHQSSMVHIYRDQQHHHDSETQSRLIGTGLNQSSRTSQPHQQQTSSQQVTQQPSSRPSQVSSNQQPTGQDASSTLTAASLIDAIITHQINQSFKSGTSTPLANSHTRPGDRLFQGFQRENLNELNGVVHSSASEGNSAVLGVGEIVREGEKATGISERNDHIGTKDYGPSHHSSYRSSYPGYAMAEDQWKRSEGIEVDSTKSNDERQIIRVSQVPHHHHHHQQQQQQQQQQQQQQQQQQQQQSQSSLQTHQTSTKQLHAIEPVLPPDTNPSHYTRRFYENTTATTTTTSSSTPSKSNLSPFDYVKNKIVEVMRTSEDDKSVASDDKGNVSNGNVQADKDKSAESPTGDMVIDENPSQSQPPPSSSTTSNFYPFNALGVSTGLPSATTQQPTGSSSSSISIKSEKTEPAPLLSAQYEPLSDED

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-