Basic Information

Gene Symbol
Arid2
Assembly
GCA_014905175.1
Location
CM026521.1:31767423-31781139[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 1.5e-23 2.5e-20 72.0 0.0 1 89 15 101 15 101 0.95
2 2 7 1.1e+04 -5.3 4.5 36 65 1727 1747 1701 1770 0.53

Sequence Information

Coding Sequence
ATGGCCAAAATCCTTAACAAGGACCCAATTACCTACGAAAGGGAGCGTGACAGCTTCCTCAAAGAATTACATCATTTCCACGAAACAAGAGGaACATCCTTTAAAAAGGCACCAAAAATAAGTGGACAAAACATTGATCTTTATTTGCTTTATGTTCTTGTTACTGCTCATGGAGGATGGATCAAGgtaAATACAAGAAATGAATGGTCATTACTTTGTGAACAATTTCATCTTCCAGTTGGTTGTGTCAATAGTGGTGTTGGTCTCAAGCAAATTTATTTGaggtaTTTGGATAGATATGAAAAAGTACATTTTCTTGGTGAAGATGGACAAcaagctgatgatgatgatgaagattcaCGTCATCGTAAATGGTCAGCAAGATCATTGCATTCAGTACCATTAAcatataatcatcatcaacataatGTTGCTGAAACATTACGTGATTATAAtggtttatcaacaaatttatataaaccaacaaattatgataaattagcACTGTCATTATTATCACCACTTCCAAATGAACAAGATTTTGCAATAAATGTATgtacattattatcaaatgagGGTAAACATACATTAAGATTTGATAAATATCCAAGACTTGTTAATATGTTACTTGCACATGCTGGTGTATTTGATGCACCAGGTACACGTCAACTATTTATTGAAGTTTATTCAAAAGTtagaaattattcaataaattcattttggtCAGATGTTATTGATTCACATGACATATTAGATTTAACAAATGAAcgaatatttatgaaaaaaccaactaaaaatttaaatacattttcaagaagaaaaatattggataaagaaaaagataaattgaaaaaaaatagtaatagaaaatctaaattaagtagtaataataacaataataataataatagtaatgttaataataataataatagtaatagtgaaaatatacaaatggaaattgataatgataataatacacctgttgatgatgttgttgttattggagaggaagaagaagaagtagtagaagaacaaaataataatagaataaataaaataaatttggatgatcaaaatcaaaattcaataaaagttgaagatgatgatatGGATTTATTTTGTATGGGTAGAACACTTGGTACACAAGATCCATATGGACAACGAGTATTACAAATAGCATCAATATTAAGAAATTTAAGTTTTACAAGTGAAAATGCTGTTGTACTTGGTAAAAATCGTTGTTTTTTACGTTTTGTATTACTTTGTGTTAGAGCAAGATGGAGTAATTTACATCAACTTGGTTTTGATATACTTGGTAATATTGCTAATGAAATTGTATTAAAAGATGCTGGTCAAAGAATAACAGATGTTATTATATCATGTATTACAGATGGTATTAATTCATCAGATAGATTTGTTGTAATATCATGTCTTGAAATTCTTAATAAATTAAGCCAACAAGATTGTAATGAAGAAGTTGTACAATTTGGATTAACAGATAATGTTTATGATATAATATGTAGATTTTTAGCATTAAGTGATATTGCATTACTTGTATATACACTTGAATGTTTATATGCATTAACATCACTTGGTGAAAGACCATGTACAAGTATCGCGCGGGTTCGCGGAGCAATTGATACATTAGTTGCTCTTGTTACAGTTGAAGCACAAAGTTATGGTCCAAAAGCTTGTATACTTATGAGAGTTGTTGAAACAGTATCAACAgttgcaaataataataatattaccacCAACAATAATAgtaccaacaacaacaacaacaacaacaacaacaacaatagtactaccaccatcaccaccaacaacaacaacaatattaataataataataatactagtagtagtaataatagtaatagtaataataataatactagtaatattagtaataataatacatcgaCAAcgtcatcatcaatatcattatcatcatttacaacgacatcaacaataacaaatcaacaacaatcaaTTACTCAAATGaatacatcatcaacatcaacaattgCACCAGTTATTTCTGTATCATCAACTGCATCAATACCATCAATATCAGCTATATCTatagcagcagcagcaacaccTGTTACTAGTCCAGCACCATCAAGACCAACAACACCAGCAACACCGTTATCAATATCAAAAGCAGCTGCTAAAGCAAATGAAGTTGCAAATtcattacaacaacaacatgcacatcaacaaataatacaagaaAATGAACAATTTGCTCTTGGTTGGTTAAGAGCAACATTTGAACTTGTACcaaatgttaaaattgaacaagaagaattatataaaaaatatcttggtTGTTGTACTAAAATTGGAAGAAGAGGAGTTATTGCACCACTTCATTTTCCACGTTGTGTTAGatCTGTTTTTGGTGGTACTATTGGACCAAATCCAATGAAAGGTGAAACAACTGGTACTCAATATTATGAAGGAATACGTGTACGTACTAATCCAGGAACAGTAACATATCCGagccaaaatttaataacaacagcaacaacaacaacaactggtGGAACATTTTCAAGTGTCAACAATACAGTAGCAGCAGCAGCATCAACAACGACAACGCCATTAAAGGTGCATCCCGTACCACAACGTAAAATCACACCCACAAGTCCATTACCTGATAGCACATCCTATGATAATtcatccaaaaaaatattaataacaacaccTGCCTCACCAATATTAAAAGCCCACTTATCAGCTCCACCAAAACCAAccacaaatatttcaatacaaCCCCAGAATCCAGTCACCAAGGTTGACTCTAAAAGTCAGGTGTCAGTGGCGCATCCGCACTTGAGTCAGGCTCTTCTAGCATCAGCTACTCAagcacaacaacaacaacaacaacaccatcaacatcaacagcaacagcagcagcaacaacagcagcaagtAGGCCAGGATAATCGTTCGGGAACAACATCaagttcaataataaaaagccTATTGGCAACCAAGGTAACAATCAGCGGTGACTGCATGCCAAGTGCCGCTGTTGCCACTTGTGTTTCTACCCTGAATGCCTACGTAACaaatactactactactaGCATCGCATCCAGCATCAGTGCCAACCAACAAATAACCAGCAACCAGGTTGCACAacgtcaacaacaacaaagatTACTTCAACAACAATTGTCAGGTGGTATTCAGCCAGCAGCACCATCAGCAACATTGGCTAATTCTCCAGTTGTACAAAAAACACCTGTTAattcaaagcaaaaaaattcatcaacaccAGCAAGAAAAATACAAAGGCTAAATGGAGCTAAAGTTGTCGTCACAAATAACAATGACaagactGAAGTGAACGACAATTCAAATTCAACACtagcaccaccaccaccacaatTATCAACAGTATCAACAATGACTGAAAATCATacattaaatcaaaaaataatacgtccatcaacaataataacaaataaaataaatcaacgaATAATATTAGCTCCAATAATTGCTGAAGATTCagattcaacaaataattcattagcaTCAAGTAGTGGTGGTATTGGTGGAAGTCGTGATTGTTCTGGTACTGGTGCTGAAGAAGATAATAATTCCCTAACAAGTTTTGAaggtattttattaaatggagcaccaagtaatttaaatattgatgcaCAAGAagattctaaaaatatattaacaaaagaatCTCATATGCAGCAATCAATTATACTTACAGatcttcttgaaaaaaaattagacaaagaaccaataataaatggtgtattaacaaaaaattcagttaatgaaaaattagatattcctgatattaaaaaaattataaaacaagaaattaaaaatgaatgtgattcaaataatattattaaacaagaattattaattgataataaaattattaaaacaacaacaacagcagcaacaacagcagcgACAACAACACTACAATCACGTTGTATTAAAAGaactaaaaatgataatgaaagtcaaataataaaaaaagtaaaatattcaaatggtACAACATCACCAAATTTACaagatacaaaattaaatattaaaagtgaAGAAATacaagatgatgaaaaagtaaCAGTATCATCAACAGCAGCAAATTTATATGCAGCATTAGCTGCTGATTGTATTCAAGATGAACTTGATATTGATGAACCAATTAAAGAAGAAccacaacaacagcaacaacaacaacaacaacaaatttctACATCAATGATAAAAGAAGAATTACCAACAcgtattattaatcaatttcaaaataatcaaattgaaaCAGCAATACAAACTCAACCacaacaaccacaacaacaacaacaacagcaacaacaattaatagtAACAACAGCACCACGTCAAATTGTTGTACAACAAGCAATGaataatcaaatgataatatcaaattcacaaataaaacaacaaagaCCACAATCACAACCACAAGTACTACTTCAACAACAGCCAAGTGGACAATATCAATATGTTGTATCTGGTGGTGTACCAGGACAAAATTATGTATTGGCACAATCACAAACAGCTCTTGTACAAGGACAACCACAAACAGTACTTGTTGCACAAACAACACAACAACAAGGTACAGGTgctaaaacaattataatattacaacCACAAACACAACAGCATcttcaacaacagcaacagcagcatcaacaacagcagcatcaacaacaacaacatcaccaacagcagcagcaaacACAAAAAGTTGTTGCTGTAACACCACAAGGACAACAAGTTGTTGTAACTCAAGTACCAAGACCATTGTTACAAAGCTCAGCACTTGGTAATATACCACCACCACTTGTACCAACATCATCACCATTATCACAAGcatcaattattgttaataataatacattaacACAACATAATAATGGTAATACAATGACTGTTACAATACCAGGATTACCGCATGGTTGTAGTGTTGTTAATAGTGTATCTGGTAGAGTTGTTACACCAACACCAGcatcaacaccaccaccaacaagaCCTTCAACACCTCATCAAGCTGCATCAACAATTGGTATTGGTGTTAAACAACaagtacaacaacaacagcaacaacaagtaCAAGTACAAgtacaacaaatacaaatacaaaagCAAGTACAAATGCAGCAACAAgtccaacaacaacaagcacaacaacaagtacaacaacaagtacaacagcaacagcagcaacaacaacaaattccTGTtggaaaaattgttaaaaattcaacaacatcaacatcaacgtCTACGTCAACGTCGACAGATGATAGAGACAATAGTAAACCATCAACAAGTCAAATAAATCcaacagataataataataaaacttttacaattaaaattgatccAAATGCATTTCTTTGTGAATGGAGAGGttgtttaaaacaatttaaaacaccACAACAAGTTTACATGCATGTTTGTGAAATACATTGTCCAAATGGTAGTGATGAAACACTCTGTTTATGGTCAAGTTGTGATGGTTTAAAAAGACGTAGATTTTCATTAATGACACATTTATGGGATAAACATTGCAGTGCtgaaaatatgattttaagAAGAAAGCAATTAACGACAACTGGAAAAActgaaattattacaaattcaaCACCAGCAACACCAAATCATCCTGGCTATGCTCCAAATGCAGCATTTCATGCTATCAAAAGACACGCATTAGATTTTGTCAATCCAAAAGAATTAATGCAAAGGCCAAGCAAGCCGGCTGCGACTATCGCAAGTTCCTCTTCCCCCCGACCTGGGCAAAATCCTCCACCAGAACAGgaTGATAATGAGGGTCCAGTTACAAAAAGTATTCGTTTAACGGCAGCTTTGATTCTTAGAAATCTAGTCATATACTCTGCCCATGGAAGAAGacACCTGAAAGCATATGAGCCTCATTTAGCTGGTGTTGCATTGAGCAATGTTGAATCTTCAAGAACAATTGCACAAGTTCTTTATGATATGAATGAACAGACAAATAATGGTAGCAGCAGATGA
Protein Sequence
MAKILNKDPITYERERDSFLKELHHFHETRGTSFKKAPKISGQNIDLYLLYVLVTAHGGWIKVNTRNEWSLLCEQFHLPVGCVNSGVGLKQIYLRYLDRYEKVHFLGEDGQQADDDDEDSRHRKWSARSLHSVPLTYNHHQHNVAETLRDYNGLSTNLYKPTNYDKLALSLLSPLPNEQDFAINVCTLLSNEGKHTLRFDKYPRLVNMLLAHAGVFDAPGTRQLFIEVYSKVRNYSINSFWSDVIDSHDILDLTNERIFMKKPTKNLNTFSRRKILDKEKDKLKKNSNRKSKLSSNNNNNNNNSNVNNNNNSNSENIQMEIDNDNNTPVDDVVVIGEEEEEVVEEQNNNRINKINLDDQNQNSIKVEDDDMDLFCMGRTLGTQDPYGQRVLQIASILRNLSFTSENAVVLGKNRCFLRFVLLCVRARWSNLHQLGFDILGNIANEIVLKDAGQRITDVIISCITDGINSSDRFVVISCLEILNKLSQQDCNEEVVQFGLTDNVYDIICRFLALSDIALLVYTLECLYALTSLGERPCTSIARVRGAIDTLVALVTVEAQSYGPKACILMRVVETVSTVANNNNITTNNNSTNNNNNNNNNNNSTTTITTNNNNNINNNNNTSSSNNSNSNNNNTSNISNNNTSTTSSSISLSSFTTTSTITNQQQSITQMNTSSTSTIAPVISVSSTASIPSISAISIAAAATPVTSPAPSRPTTPATPLSISKAAAKANEVANSLQQQHAHQQIIQENEQFALGWLRATFELVPNVKIEQEELYKKYLGCCTKIGRRGVIAPLHFPRCVRSVFGGTIGPNPMKGETTGTQYYEGIRVRTNPGTVTYPSQNLITTATTTTTGGTFSSVNNTVAAAASTTTTPLKVHPVPQRKITPTSPLPDSTSYDNSSKKILITTPASPILKAHLSAPPKPTTNISIQPQNPVTKVDSKSQVSVAHPHLSQALLASATQAQQQQQQHHQHQQQQQQQQQQQVGQDNRSGTTSSSIIKSLLATKVTISGDCMPSAAVATCVSTLNAYVTNTTTTSIASSISANQQITSNQVAQRQQQQRLLQQQLSGGIQPAAPSATLANSPVVQKTPVNSKQKNSSTPARKIQRLNGAKVVVTNNNDKTEVNDNSNSTLAPPPPQLSTVSTMTENHTLNQKIIRPSTIITNKINQRIILAPIIAEDSDSTNNSLASSSGGIGGSRDCSGTGAEEDNNSLTSFEGILLNGAPSNLNIDAQEDSKNILTKESHMQQSIILTDLLEKKLDKEPIINGVLTKNSVNEKLDIPDIKKIIKQEIKNECDSNNIIKQELLIDNKIIKTTTTAATTAATTTLQSRCIKRTKNDNESQIIKKVKYSNGTTSPNLQDTKLNIKSEEIQDDEKVTVSSTAANLYAALAADCIQDELDIDEPIKEEPQQQQQQQQQQISTSMIKEELPTRIINQFQNNQIETAIQTQPQQPQQQQQQQQQLIVTTAPRQIVVQQAMNNQMIISNSQIKQQRPQSQPQVLLQQQPSGQYQYVVSGGVPGQNYVLAQSQTALVQGQPQTVLVAQTTQQQGTGAKTIIILQPQTQQHLQQQQQQHQQQQHQQQQHHQQQQQTQKVVAVTPQGQQVVVTQVPRPLLQSSALGNIPPPLVPTSSPLSQASIIVNNNTLTQHNNGNTMTVTIPGLPHGCSVVNSVSGRVVTPTPASTPPPTRPSTPHQAASTIGIGVKQQVQQQQQQQVQVQVQQIQIQKQVQMQQQVQQQQAQQQVQQQVQQQQQQQQQIPVGKIVKNSTTSTSTSTSTSTDDRDNSKPSTSQINPTDNNNKTFTIKIDPNAFLCEWRGCLKQFKTPQQVYMHVCEIHCPNGSDETLCLWSSCDGLKRRRFSLMTHLWDKHCSAENMILRRKQLTTTGKTEIITNSTPATPNHPGYAPNAAFHAIKRHALDFVNPKELMQRPSKPAATIASSSSPRPGQNPPPEQDDNEGPVTKSIRLTAALILRNLVIYSAHGRRHLKAYEPHLAGVALSNVESSRTIAQVLYDMNEQTNNGSSR

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-