Agif000712.1
Basic Information
- Insect
- Aphidius gifuensis
- Gene Symbol
- retn
- Assembly
- GCA_014905175.1
- Location
- CM026525.1:19144317-19209020[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 2.5 4.2e+03 -2.4 0.1 8 19 93 104 91 118 0.56 2 3 2.3e-25 3.7e-22 77.9 0.1 2 89 264 349 263 349 0.96 3 3 0.42 6.9e+02 0.1 0.0 19 49 505 535 484 543 0.74
Sequence Information
- Coding Sequence
- ATGGAGACGGGTGATGAGTATTCTGATATGTCAACTCCAGTTGTTGTTGGTGCTAAtggtaatggtggtggtggtggtgttacAATACCAAATATACCAACTGAACATCATGGACATGCATCTGACAGTAGTCTGTCACATCAAGAAGAAGATACATCTGATCCAGATCTTCAAGATGAAGAAAGTGGTGAAGAATTACCACAACAACCACTTCATGATACAAAACATTCAATAAATGATCATTTATCAACACCAACAAATATGACACCAATGTCACATTTGAGTAATTTTATGGcacaaaatcaaaattttttgtcaaaattaaaaatggagccaAATGACTTGGAGATGACTGCATatcaaaaacatcaacaacCAAATATTGAAGCACTTCAAGCAGCACTTAGCAATATAAGTaatggaaattttaatttaccatttaCATTTCCACAACCAGCAGCATATTTAAATCATCCTAATAATCAACCCCATACAATTGGAAGTGGTGGTAATGGTAACGGTGGTAACGGTGGTAGCGGTGGTAACGGTGGTAACGGTGGTAGTGTTAATAATAGTGGTGTTTGTCAAAGTGCAAATAATCCATTACCATCATCAGCAAGTTCACATTCAAGTGAATCATCACAAGGATCAGCAAGAAATATAAGTGATGCACGTGAAGGTACAAGTGgttcacaaaataataatggttcACAACAACAATCAAATTGGAGTTTTGAAGAGCAGTTCAAACAGGTGCGTCAGttGTACGAGATTAATGATGACCCAAAACGCAAAGAATTTCTTGATGAACTCTTCAGTTTCATGCAAACACGAGgtaCACCAATTAATAGACTTCCAATAATGGCTAAATCAGTGCTGGATTTATATGAATTGTACAATTTAGTTGTCATACGAGGTGGTCTTGTTGaagttatcaataaaaaattatggcaAGAAATTATCAAGGGACTTCATTTGCCATCAAGTATAACATCAGCTGCTTTCACACTTCGTACACAataTATGAAGTATCTTTATCATTACGAgtgtgaaaagaaaaatttttcatcaccTGGTGAATTACAATCGGCTATTGATGGAAACAGACGTGAAGGAAGACGTAGTAGTTACACAGCATATAACGGAGGCGGTGGAGGTGGAGGAGGAGGTGgaggaggtggtggtggtccTGATAGTATGATGCAACGTAATTCACACAGTCTTCATGCACAAATGTCACCACTTGCACTAGTTGGTGGACAACATCTAAGTCAACAATCAATGGTTAATGGAGGTGGTGCACATGCACCAATGTCACATCATCCACATCATCAAGGAATACCTGGACAATCACCATTTCCaggaatGACAGGAATGAGTGGAATGACACCAGAAATGGAATCACAAATGttggaatattttaaaatgattagtGCATCAGCTGAAATGCATCGTATGAATGCTGCTGTTGCTAATTCATCACCAATGATTAATAGACAAGGCAGTACATCACCATTATCAAAACAATCACCACCAGATATACGCAATTTACCATTAtggaatttatataataataataatatatatactggTTTTCAACAAACACAAATGTCACCAGTAGCACCAAATTCACCAGAACAAGAACGAACACCTGAACCACAAAGAGAAGCACTTGATCTTGGTTTAAGAACATCACCAACATCAACTGTACAAAGACCACCATCAGTACCTCATACATTACAAgttaaaaaagatttaatgCGTAAATCAAATAAACGTTTACattctgatgatgaaaatattactGAAACACCAACAACATCAATACCTGGTACacatattaaaataactaaTGGACAAAATGGTGAATCTTCACTTGTTGTTAGTATGGAATTAAATGGTGTTGTATATGAAGGTGTTTTAATGGCACAAACTGATAGGCGAgccaataataattcaacaaataacaGAGGTAATTCAAATGGATATTAA
- Protein Sequence
- METGDEYSDMSTPVVVGANGNGGGGGVTIPNIPTEHHGHASDSSLSHQEEDTSDPDLQDEESGEELPQQPLHDTKHSINDHLSTPTNMTPMSHLSNFMAQNQNFLSKLKMEPNDLEMTAYQKHQQPNIEALQAALSNISNGNFNLPFTFPQPAAYLNHPNNQPHTIGSGGNGNGGNGGSGGNGGNGGSVNNSGVCQSANNPLPSSASSHSSESSQGSARNISDAREGTSGSQNNNGSQQQSNWSFEEQFKQVRQLYEINDDPKRKEFLDELFSFMQTRGTPINRLPIMAKSVLDLYELYNLVVIRGGLVEVINKKLWQEIIKGLHLPSSITSAAFTLRTQYMKYLYHYECEKKNFSSPGELQSAIDGNRREGRRSSYTAYNGGGGGGGGGGGGGGGPDSMMQRNSHSLHAQMSPLALVGGQHLSQQSMVNGGGAHAPMSHHPHHQGIPGQSPFPGMTGMSGMTPEMESQMLEYFKMISASAEMHRMNAAVANSSPMINRQGSTSPLSKQSPPDIRNLPLWNLYNNNNIYTGFQQTQMSPVAPNSPEQERTPEPQREALDLGLRTSPTSTVQRPPSVPHTLQVKKDLMRKSNKRLHSDDENITETPTTSIPGTHIKITNGQNGESSLVVSMELNGVVYEGVLMAQTDRRANNNSTNNRGNSNGY
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -