Aerv008521.1
Basic Information
- Insect
- Aphidius ervi
- Gene Symbol
- Zfpm1
- Assembly
- GCA_015776835.1
- Location
- MKYW01000015.1:1190705-1198019[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 12 0.011 1.1 9.8 2.4 2 23 70 91 69 91 0.96 2 12 0.47 46 4.7 0.5 1 23 181 204 181 204 0.91 3 12 0.0094 0.92 10.0 0.2 1 23 401 423 401 423 0.96 4 12 0.00032 0.031 14.6 0.5 1 23 432 454 432 454 0.98 5 12 6.7e-05 0.0066 16.8 2.1 1 23 460 483 460 483 0.97 6 12 0.0025 0.25 11.8 2.2 3 23 648 669 646 669 0.96 7 12 9.1e-05 0.0089 16.4 0.1 2 23 947 968 946 968 0.97 8 12 0.13 13 6.4 4.0 1 23 974 997 974 997 0.97 9 12 0.059 5.8 7.5 4.2 1 23 1042 1066 1042 1066 0.95 10 12 0.43 42 4.8 5.1 1 23 1177 1200 1177 1200 0.94 11 12 0.031 3.1 8.4 1.1 3 23 1245 1265 1243 1265 0.90 12 12 8.5e-05 0.0083 16.4 1.8 1 23 1271 1293 1271 1293 0.98
Sequence Information
- Coding Sequence
- ATGGATTTTTCAACTAAAAAATTGCATAAAGTGACGATTAAAAGTTTACCGGATCATCAAAAAACAAGTCAAATTCAAGCATCAAAATCACCAATTGAAAAATCACCAGATTATAAAATGGCAACTGTATCAATGTACACACCTGAACAATACAGAATGGATTTACCAAGTTCACCAGAAAGTGATAACAGCCGTGCTGAAGATTTATCATGTCAACATTGTCAAAAAGTATTTTATTCAATATCATCACGTAGAGAACATGAGTTGACTCATTCAACACCATCAAAAATAAATTTATATGAACGTAATTGGCTAAATGAACATATACCATTAATTGACAAATCACAATTAATAAATTCAATGGATTCTGATAGCTCTGGATCAGATAATAATTCAATGAAAAATATAAAAAAATTATATAAACGTAAAAATAAAGAATATAATAATAATCTTGACCTATCATCAGATATTGATTCACCAAATAAAAAATTATTATCAAATAAATCACTAATTGATGATTGGAAAAAATCAATGTATTTATATAATTGTCCGGTATGTAATAAAATGAATTATTTAGAAAAATCACTTGATGAACATATTAAAAAAAATCATCCAAAATATAATACAACAACAATAACAACAACACCAACAAAACGTACATATGATTTATGTGATGATTATGAATTAAATAATGATATACGTACTAATAAAAAAATTAAATCATTATCTGGTTTTCAAGATTTAATATTTACTGATTTTACATCAAATAAATTTACAACAATTGCACGTTCAGCATGTGAAAAGTTATTACATCATCCAGTTGCTGGTGATACATTACCATTTCAATGTATAAAATGTAAACGTGGTTTTCCATGTAAATCAGCACTTGATGAGCATGAAATTGATTGTGATAATGTAACAACAACAACAACAACGACAACAACGACAACGACACATGATGAAATAATTGAAAATAGTAAAGATTTAGCTGACATATCAAGTATAATATCAATGACAACATCAGCAAGATCATTTTTACCACGTTCAGATACATCAACACCAGATCAACATATTAAATTAAATAATAATAATAATATTATGTCATCTGGTTCATCTGGTCATGCATCATCTGAATGTCATGAAGAAGAAGTACAAGATCCATATGTTTATGAATTTCGTAAAATGAAATTAAAAAATGAATTTCCATGTCGTTTATGTGATCAAGTATTTCAAAATTTACGTGCACTTAAAGGACATAATCGTGCACATTTAAATGTTGATAATGGTGAACCATATCCATGTAATATGTGTCCATTTACATCAACAGATAAAGCAACAGTACAACGTCATTTACGTAATCATAATGGTGATAGACCATTTGAATGTCAAATTTGTGGTTTTGCATTTACAACAAAAGCTAATTGTGAAAGACACATAAGAAATCGTCATGCATTGTATGCAAATGCACAATATATTTATAGAAATCTTGCTGGTTTTCCAGTAGCATCAACAACAGCAGCAGCAGCAGCATCAAATATTGGCAATACATTAATACCACCATATATGTTTAATCCACAATTTCAAGATTATGCTATTAGAGAAAGATTACAAAAAGATTTTGTACGTGGTTTACAATTAACAAGTGGTGGTAGTATTATTGATACAACAATAAATAATACAAATTTTTCAGCAGCTGCTGTTGTTGCTGCTGCTGCATATGAAAAACAACGTACACGTGATATTATAACAACAACAACAAAAAGACCAATTGATATACATAATAATGATTTTATTAAAATAACAACAAATATGCAAAAAAAAATTAAACTTGATAATCAAATTGATAAAACACAATCAAATTCAGTTAAAATGGTATTAAAAAATGGTGTATTAATGCCAAAACAAAAACAAAGAAGATATAGAACAGAAAGACCATTTGGTTGTGAGCATTGTTCAGCAAAATTTACATTAAGAAGTAATATGGAAAGACATATTAAACAACAACATCCACAATGTTGGACATCAAGACCACGTGGTGGACATTCAACACGTGGTAGACCACCAGCAAATCCACCAACATTATTAAAAAATTATAATCATCAAAATTCAACATCATCATTATCACTTGGTGATTTAATAACAAGAACAGAACAATTATCTAATAATAATAATAAAAAACAACATATTTCTGATGAAGTTAAATATGCCATACTTGCTCAACAATTAAAAGGTAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGATGAAGAACTTGTTATTGATGAAAATAATATTGATAAAAATATTGATAATCAACCAATGAGTTTATTACGTGGTAAACTTGAAGAAAATCAATTAAAAATTGATTCAAATGATATTATTATTAAAAATGAACCAAATGTAGAAGATTTAAAAAAAAAAAAAAAAAATGATGATGATGATAGTAGTGTTGGTGATGGTGGTGGTAACAACAGCAGCAGCAGCAATGAAGACATTGAAAAAACAATAATAAAAACAGAAGATAATAATGCTGATCTTGCAAGTGTATCTGAATTACTTGATAATGCATCACAACAATATCAACAATTTCAGCCACAATATATGAGTGATGAAGAGGGTCTTATTGGTTCAAGTGATTTTAATAATTCAGGAAGTGATGAAAAATCAGATTCAGCAAAATCATGTAAATCATATAAATCAGGTAAATCTAATAAATCATTATTAGAAAAAAAAAGAAGAAAGAAAAAAAAATCAAAATCAGCATATTCATTGGCACCAAATAGAGTACCATGTCCATATTGTCAACGTGAATTTCCATGGTCATCATCACTTAATCGTCATATATTAACACATACTGGTGATAAACCATTTAGATGTAATTTATGTGCATTATTATTTACAACAAAATCAAATTGTGATCGTCATATGTTGAGAAAACATAAAACATCAAGTAAATCAAAATGTTTAATGAATTTAAAGCTATCACGTCGTCATAATAATCATGAAAATACATTTAATAATAATAATAATAATAATAATTGTTTTTCAATGCGTAATGTACCAGAAAGACCATTTAAATGTCAACATTGTCCAAGTTCAACATTTGCAACACATGGTAATTTAAAAAAACATGTTGCTAAAAAACATACACAAAATGGTAAATCAAGATCAGCTAGTCCAATGAGTGATGGATCATGTGAACAACAAATACATAGTCCAATTGATCAATCAATTCAACAAGAACAAGATCAACATTTACAAGAACCACCACTACAATTACAAACACAACTACCACCACCACCACCACAACAACAAAATGATCAAAGTGGATATGAAAGTCAATCATCAAATCAATCTGGTTTTAATGATAGTGGAAATAAATCATCATCAGATATTATTACATTTAATAATAATAATATAAATAAAAATACAAAAAGACCATCACCAAGAGCTTCACCAGGACCAAGTGATGTACCATTTAAATGTCATCTTTGTGATTGTAGTTTTGCCGAAAGAAATGAATGTTTAGAACATATTAAAATTTTACATCCAGAAACATTTAAAAAACTTCATGATAATGGTGCATTTGAACAAAATTCAGCAAATTTGAATGGACAAAATAAAACAAAATGTGAAGGAAAACAAAAAAAGAGTCATGATCATAGTAATAGAAAGGTTGTTTGTGCATTTTGTATGCATCGTTTTTGGTCAGCTGAAGATTTACGTCGTCATATGCGTACACATACTGGTGAACGTCCATTTGAATGTGATATTTGTGGTGTTGTATTTTCATTAAAACACAGTATGTTACGTCATCGTAAAAAACATACAACACAAAAAAATAGAAAATCAAATAATGAACATCATCATGATGATGATTTATTATCAGGACAACAATTAACTGGTGTACATGAACGTTTATCAATGTTAAATGTTAACTCAACAGTTACTAGTGAGGCTGGACCAAGTGGAATTATGAGATTTAATTCTTATGATAATTTAACAACGTTGACTGGTAATATGAGTAGTTCAAGTTCAACACCAGATACAACACCCGACAATAATACTGATCTTATATCAAATTTACTTGGTATTCAGGATAAAAGTATTATTGATGAAGTACTTGAAGGTACACCAGACAATGCTGCTAAACTTCTTGGTGTACAAAGAAATTAA
- Protein Sequence
- MDFSTKKLHKVTIKSLPDHQKTSQIQASKSPIEKSPDYKMATVSMYTPEQYRMDLPSSPESDNSRAEDLSCQHCQKVFYSISSRREHELTHSTPSKINLYERNWLNEHIPLIDKSQLINSMDSDSSGSDNNSMKNIKKLYKRKNKEYNNNLDLSSDIDSPNKKLLSNKSLIDDWKKSMYLYNCPVCNKMNYLEKSLDEHIKKNHPKYNTTTITTTPTKRTYDLCDDYELNNDIRTNKKIKSLSGFQDLIFTDFTSNKFTTIARSACEKLLHHPVAGDTLPFQCIKCKRGFPCKSALDEHEIDCDNVTTTTTTTTTTTTHDEIIENSKDLADISSIISMTTSARSFLPRSDTSTPDQHIKLNNNNNIMSSGSSGHASSECHEEEVQDPYVYEFRKMKLKNEFPCRLCDQVFQNLRALKGHNRAHLNVDNGEPYPCNMCPFTSTDKATVQRHLRNHNGDRPFECQICGFAFTTKANCERHIRNRHALYANAQYIYRNLAGFPVASTTAAAAASNIGNTLIPPYMFNPQFQDYAIRERLQKDFVRGLQLTSGGSIIDTTINNTNFSAAAVVAAAAYEKQRTRDIITTTTKRPIDIHNNDFIKITTNMQKKIKLDNQIDKTQSNSVKMVLKNGVLMPKQKQRRYRTERPFGCEHCSAKFTLRSNMERHIKQQHPQCWTSRPRGGHSTRGRPPANPPTLLKNYNHQNSTSSLSLGDLITRTEQLSNNNNKKQHISDEVKYAILAQQLKGXXXXXXXXXXXXXXXXXXXXXXXXXXXDEELVIDENNIDKNIDNQPMSLLRGKLEENQLKIDSNDIIIKNEPNVEDLKKKKKNDDDDSSVGDGGGNNSSSSNEDIEKTIIKTEDNNADLASVSELLDNASQQYQQFQPQYMSDEEGLIGSSDFNNSGSDEKSDSAKSCKSYKSGKSNKSLLEKKRRKKKKSKSAYSLAPNRVPCPYCQREFPWSSSLNRHILTHTGDKPFRCNLCALLFTTKSNCDRHMLRKHKTSSKSKCLMNLKLSRRHNNHENTFNNNNNNNNCFSMRNVPERPFKCQHCPSSTFATHGNLKKHVAKKHTQNGKSRSASPMSDGSCEQQIHSPIDQSIQQEQDQHLQEPPLQLQTQLPPPPPQQQNDQSGYESQSSNQSGFNDSGNKSSSDIITFNNNNINKNTKRPSPRASPGPSDVPFKCHLCDCSFAERNECLEHIKILHPETFKKLHDNGAFEQNSANLNGQNKTKCEGKQKKSHDHSNRKVVCAFCMHRFWSAEDLRRHMRTHTGERPFECDICGVVFSLKHSMLRHRKKHTTQKNRKSNNEHHHDDDLLSGQQLTGVHERLSMLNVNSTVTSEAGPSGIMRFNSYDNLTTLTGNMSSSSSTPDTTPDNNTDLISNLLGIQDKSIIDEVLEGTPDNAAKLLGVQRN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -