Basic Information

Insect: Aphidius ervi
Gene Symbol: -
Assembly: GCA_015776835.1
Location: MKYW01000002.1:2727233-2730286[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 0.2 19 5.9 0.5 6 21 222 237 219 238 0.90

2 12 0.00037 0.037 14.4 0.3 1 23 244 267 244 267 0.94

3 12 9.9e-05 0.0097 16.2 2.8 2 23 280 302 279 302 0.95

4 12 0.0011 0.1 13.0 1.0 3 23 315 335 315 335 0.97

5 12 2.6e-07 2.5e-05 24.4 2.1 2 23 374 395 373 395 0.97

6 12 0.0025 0.24 11.8 0.6 1 23 400 423 400 423 0.94

7 12 0.23 23 5.6 1.9 2 23 493 514 493 514 0.97

8 12 7.1e-05 0.0069 16.7 2.0 1 23 523 545 523 545 0.94

9 12 0.038 3.8 8.1 5.6 1 21 569 589 569 590 0.95

10 12 0.0022 0.22 12.0 2.8 3 23 614 634 612 634 0.97

11 12 0.11 11 6.6 0.0 1 23 691 714 691 714 0.97

12 12 5.1e-06 0.0005 20.3 5.5 1 23 719 742 719 742 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	0.2	19	5.9	0.5	6	21	222	237	219	238	0.90
2	12	0.00037	0.037	14.4	0.3	1	23	244	267	244	267	0.94
3	12	9.9e-05	0.0097	16.2	2.8	2	23	280	302	279	302	0.95
4	12	0.0011	0.1	13.0	1.0	3	23	315	335	315	335	0.97
5	12	2.6e-07	2.5e-05	24.4	2.1	2	23	374	395	373	395	0.97
6	12	0.0025	0.24	11.8	0.6	1	23	400	423	400	423	0.94
7	12	0.23	23	5.6	1.9	2	23	493	514	493	514	0.97
8	12	7.1e-05	0.0069	16.7	2.0	1	23	523	545	523	545	0.94
9	12	0.038	3.8	8.1	5.6	1	21	569	589	569	590	0.95
10	12	0.0022	0.22	12.0	2.8	3	23	614	634	612	634	0.97
11	12	0.11	11	6.6	0.0	1	23	691	714	691	714	0.97
12	12	5.1e-06	0.0005	20.3	5.5	1	23	719	742	719	742	0.97

Sequence Information

Coding Sequence: ATGTCGTTGGAAAGTGAGTGGAAAAATACATGTAGGCTTTGTGCTGAAAATAAATTAGACATGTTAAAAATATTTGGTGATGAAGGTAAAAAACGTAAAATTGCAAATAAATTACGTTTATGTTTACCAGTTTTAGTATACAAAACAGATCCATTACCAAAAAATATATGTCAATTTTGTGCAGCACGTCTTGATGATATTTATGAATTTCGTGAATATTGTTTAGATATATATAAAAAAATGCATTGTAAATTATTAACAAATAAAGATATTAAAACAGTTAATATATTTTTGGATGCAATGAATAATTCTGTGGATCCATGTAAAGTTAATTTATGTACAAATAAATCACGTGCACCATTACCACCACTAGTACCATTGCCAATAACATCAAATACAAAAATTGATAATAAATTACAAGATGAATTAAGTATTAATTCAATTGTTAATAATAATAAAACAAGTGTTGTTGAAGATGATGGTGAAGATGGTGAAGATGATGATGAAGAAAATGATAATGATGTTGAAAATAAAAAAAACAAATCATTTGTTGATTTAACATGTGATGTACAAATTAAAGAAGAGCCAGGAGTAAATAATCAAGTTAACAATTGTCAAGAGTCATCAAAGGAAAAATTAACATCTAAATGGTGGTGTTTACCTTGTAACAGTTATTTCAAAACAAAAGAAGCTTTGATAAAACATATGCATCAAAATTGTCCTCGTAGTTATACATGTGGTAAATGTACACAAGTATTTAAAAGTGTTGAAGAATTAGCTAAACATGAAGGTACAAATCATTTAAAAATAACACTTGATTTTGATGAAACAGTTAAAGAATGCCATCAATGTGATCGTGAATTTGTTAGTTGGGAAATGCTTAGACATCATCGTATACGTGATCATGTTGGTTGTTCACTTGAACTTGGTACAAGTACATGGTGTCAAATATGTAATAGATTTTTTACAAATACTGATGATTATAAAAGTCATGTGGAACTTCATAATTCTGATACATCAATTTTAAATAATGACATAAATAATGGCTTTGCTATTGATGATGATGATGATGATGATGGTAAAAAAAAAGAACAATTTATTAAAAGTATCAAGTCATTAACTTGCCCAACTTGTGGAAAGACATGTACACAACAGAGTGCACTATCAAATCATTTACGTACACATGAGCCAAAAAAACATAAATGTGAAGAGTGTGGTAGATCATTTGGTTTATTGATACGTTTAGAAACACATAGACTTAGTGAGCATAATAATCAGCAGTCATCATCACCTGTTATGACAAGTGTTGAACAAGAAGAAGCATTAAATGCTGAAAGAGAAGCTCGTGAAGCTAAAATGACAGGAAATCGTCGTAGAAAATATTCCGAGACAATTGACAATGATGATCTTTTAACAGACAATCAATCACCAGCTAAAAAACAAAATAATAATTCAAATTCATTGAAAAATGTTGCACGATGTGGTATATGCCAACAATGGTTCAATGATCATACAACAATGTTAACACATTTACAAACTCATTCAGATAATATAACAGTTAAAAATTTCTTTTGTTATATATGCAAAAAAAGTTTTAAAGAAAAATGGCAATTACAAAGGCATGAGGTATCACATAAGCATAATAAAACACTTGCAATTAATAATAAAAATAAACATGAAAATACTCATGTTGTTGATAAAACTTATCATTGTTCAAAGTGTAATAAAATATTTTTCAAAGAATTTTCACTTATGACACATCAGTGTAGTCCATTATTGACAATTGAAAAAATACCAGCTAAGAGAAAAATTAGAAAACAAAATTTTAAAAAATATGGATGTTCAAAGTGTGATGCTTGTTTTAATAGTTCACAATCCAGAAATTCACATATGAAAGTTCATGCTCCATCAAAGACAAAAAAAAATATAAATAATGGAACTGAAGAAAGTAAAAAAATAGTGCCAGAATTATCACAAGGTACGTCGTTATTACTTGAACCAAAAGTTGTCATTGAAGAACCAGAACCACCAGCACCAATTAAAAGGACTCTTATTAAAACAGCAAATGGATATCGTTGTGGAGTGTGTCAGTCACCTTTTGTACTTCGTGAATTGGCTGTTGCACATTTACGTTCAGCACATCCAGTGATGCCTTATCAATGTCCATATTGTAAAAAACGTTTTACAACACAATATACATTTTCACATCATATTAAGGAACAACATCCTGATGAGTCTGAAAAATAA
Protein Sequence: MSLESEWKNTCRLCAENKLDMLKIFGDEGKKRKIANKLRLCLPVLVYKTDPLPKNICQFCAARLDDIYEFREYCLDIYKKMHCKLLTNKDIKTVNIFLDAMNNSVDPCKVNLCTNKSRAPLPPLVPLPITSNTKIDNKLQDELSINSIVNNNKTSVVEDDGEDGEDDDEENDNDVENKKNKSFVDLTCDVQIKEEPGVNNQVNNCQESSKEKLTSKWWCLPCNSYFKTKEALIKHMHQNCPRSYTCGKCTQVFKSVEELAKHEGTNHLKITLDFDETVKECHQCDREFVSWEMLRHHRIRDHVGCSLELGTSTWCQICNRFFTNTDDYKSHVELHNSDTSILNNDINNGFAIDDDDDDDGKKKEQFIKSIKSLTCPTCGKTCTQQSALSNHLRTHEPKKHKCEECGRSFGLLIRLETHRLSEHNNQQSSSPVMTSVEQEEALNAEREAREAKMTGNRRRKYSETIDNDDLLTDNQSPAKKQNNNSNSLKNVARCGICQQWFNDHTTMLTHLQTHSDNITVKNFFCYICKKSFKEKWQLQRHEVSHKHNKTLAINNKNKHENTHVVDKTYHCSKCNKIFFKEFSLMTHQCSPLLTIEKIPAKRKIRKQNFKKYGCSKCDACFNSSQSRNSHMKVHAPSKTKKNINNGTEESKKIVPELSQGTSLLLEPKVVIEEPEPPAPIKRTLIKTANGYRCGVCQSPFVLRELAVAHLRSAHPVMPYQCPYCKKRFTTQYTFSHHIKEQHPDESEK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00131501; iTF_00132795;
90% Identity: iTF_00132795;
80% Identity: -