Basic Information

Insect: Aphidius ervi
Gene Symbol: Prdm15
Assembly: GCA_015776835.1
Location: MKYW01000031.1:2068-5130[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 13 2.8 2.7e+02 2.2 0.4 2 10 73 82 72 84 0.92

2 13 0.00069 0.067 13.6 1.7 1 23 257 280 257 280 0.95

3 13 6.6e-07 6.5e-05 23.1 0.4 3 23 386 406 384 406 0.97

4 13 0.023 2.3 8.8 1.4 1 20 410 429 410 431 0.93

5 13 1.3e-07 1.3e-05 25.3 1.1 1 23 439 461 439 461 0.98

6 13 0.17 17 6.1 4.6 3 20 467 484 466 486 0.92

7 13 6.9e-05 0.0068 16.7 3.2 1 23 490 512 490 512 0.98

8 13 2e-05 0.002 18.4 0.3 2 23 530 551 529 551 0.96

9 13 0.086 8.4 7.0 1.8 1 23 557 581 557 581 0.97

10 13 0.00032 0.031 14.6 0.3 2 23 587 609 586 609 0.95

11 13 0.00066 0.064 13.7 4.9 1 23 617 640 617 640 0.96

12 13 0.0001 0.01 16.2 3.2 1 23 669 692 669 692 0.97

13 13 3.4e-05 0.0033 17.7 3.2 1 23 697 720 697 720 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	13	2.8	2.7e+02	2.2	0.4	2	10	73	82	72	84	0.92
2	13	0.00069	0.067	13.6	1.7	1	23	257	280	257	280	0.95
3	13	6.6e-07	6.5e-05	23.1	0.4	3	23	386	406	384	406	0.97
4	13	0.023	2.3	8.8	1.4	1	20	410	429	410	431	0.93
5	13	1.3e-07	1.3e-05	25.3	1.1	1	23	439	461	439	461	0.98
6	13	0.17	17	6.1	4.6	3	20	467	484	466	486	0.92
7	13	6.9e-05	0.0068	16.7	3.2	1	23	490	512	490	512	0.98
8	13	2e-05	0.002	18.4	0.3	2	23	530	551	529	551	0.96
9	13	0.086	8.4	7.0	1.8	1	23	557	581	557	581	0.97
10	13	0.00032	0.031	14.6	0.3	2	23	587	609	586	609	0.95
11	13	0.00066	0.064	13.7	4.9	1	23	617	640	617	640	0.96
12	13	0.0001	0.01	16.2	3.2	1	23	669	692	669	692	0.97
13	13	3.4e-05	0.0033	17.7	3.2	1	23	697	720	697	720	0.97

Sequence Information

Coding Sequence: ATGGATAACAACAACAACATTCATCTCATGCTAAATGACATTGTCAATTTATCAGCATGCAATATTTGTGGAGGATCTCATGAGAGCCATGATTGTCAACATCTTGTCGATCTTCATTATATTCCAGATAGTCCAATTTTGTCAAAGGCTCGTCAAACATTACCAAAAAATTTGGAAATAATACAAATGAGTGATGGAACAATAAATGTAATTTCAAAATGTCATTTAAAATGTGGCACAGTATTTGGTCCATTTGATGCTGATAAATCTTTATTATACGTTAATACAATGGCAAATTTTCCATTAAAAATATTTGGAAAAAATGATAATGATAGTTATTATCTTGATTATTCAAATGAACAACATTCAAATTGGATGTGTTTTATTTCACCAGCATCATCATTAATTGAACAAAATTTAATGTGTTATCAATCAGAAAATAATATATTTTATACATCAACAAGACCAATTAAAATTGGTGAAGAATTACATGTTTGGTATGCTCCATATTATGCTGTTAAAATGAAAATGCCATTTTATAAAAGTCAATCAAATCAACAGTCTGAAAGCACCGACAACAACAATAACAATAACAATAACAATGAAACAATTTTTGACAATAATAATAAAACTGTGTTGATAAATGATATTGATGCAAAAAATAATCAACAACAAAATTATTGGAAATGTCGTATTTGTTATAAAATATCATATACAATTGTAACACATGCTAAACATCTTACTGAACATTACAAATGCTTTATCGGTTTTTATTGTAATATTTGTAATGAAAAATTTAATAGCATTGATGTATTGCAAAAACACAAAAAACAATATCATACTAGTGTAAAAATAAACGAGGAAATTGGCATATCAACATTTGAAAATGACCAAACAACAATTACATCAAATAACATGAATGATATTTTAGAAAAATTAAATGCTGATGATGCAATAAATCAATCTATGATGATGATGATGATGATGAATAAAAATAATTCAAATGAAGTTTCAATAGAAAATATTGTTCCTGTTGTTGATGAAAAATTTACTATTAATGCTGAATTAAGTACAAATCTTTTAAATATTGAAACAAATACAACAAGTTTAATTCAAATTCAAAATCAAAATCAAAATAATATTGTTCCTTTGGACTGTGATATTTGTAATAAAGTATTTGAAAAACCAGAAAATCTTTATCGACATTTACGTAAACATACGGGTGAATTTATTTGTTCATCTTGTTTAGTTGTATTTTCAAAAAAAGAAAACTTACAATCACACGAATGTTTTTCAAAAAATATTAATAATTTATATGAATGTCCAATATGTCAAAAAAATTTTACAGTCAAGAAAAATTTTAAAAGACACATGATCATACATACACAAACAAATAATTGTAAATTTTGTAAGCAAATATTTACATCAAAAAGACATTTGGATGAGCATAAATGTGAAAATGCAAAATTTGTATGTGAAAAATGTAATAAAAAATTAATAAGTCATACAAGTTTAAATCGTCATATGAAATTACACGATAATCCAAAACCAAAAAATAACAAACAACAAGCTGTTGTTGGCTCATTGATATGTGAAAAATGTGGTGAAATATTTAATACAATATATAGCCTTAAGCAACATTTGAAAAGTCACATGGAACGTCAAATATTTAAATGTACATTTACTGGTTGTTTACAAACTTTTAATAGTATTGGTCTATTTGAAACGCATAAAAAAAATCATATTAAATTACAAGTAACATGTTCAACATGTCAACAAGTATTTAAAAATAAAAAAGCTTTAGATGTACATTTATCAGTTGATCATGGTAATGGTATTAAAAATTATTATCATTGTGATAAATGTGATAAAAGTTTTCTTCAATTAAATAATTTAAAAAAACATTATAAACAATCACATGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGAGACAAAATAAATTTTCATGTGAATTATGTGAAAAAATATTTAATAGTATTCATCAATTAAAAAGACATAAACAAACATCACATAATGGAGTTATTTATTCATGTCCATATTGTGATATGAAAGTTAAACATCGATACAGTTTAAAACGACATCTTGAACGTCAACACAATGATCTTATTGAACAATGGAATCAACCTAATTTTATTGATACATTGACTGATAAAAATGAAAACTCAACTATAGTTGCACCACTACCACC
Protein Sequence: MDNNNNIHLMLNDIVNLSACNICGGSHESHDCQHLVDLHYIPDSPILSKARQTLPKNLEIIQMSDGTINVISKCHLKCGTVFGPFDADKSLLYVNTMANFPLKIFGKNDNDSYYLDYSNEQHSNWMCFISPASSLIEQNLMCYQSENNIFYTSTRPIKIGEELHVWYAPYYAVKMKMPFYKSQSNQQSESTDNNNNNNNNNETIFDNNNKTVLINDIDAKNNQQQNYWKCRICYKISYTIVTHAKHLTEHYKCFIGFYCNICNEKFNSIDVLQKHKKQYHTSVKINEEIGISTFENDQTTITSNNMNDILEKLNADDAINQSMMMMMMMNKNNSNEVSIENIVPVVDEKFTINAELSTNLLNIETNTTSLIQIQNQNQNNIVPLDCDICNKVFEKPENLYRHLRKHTGEFICSSCLVVFSKKENLQSHECFSKNINNLYECPICQKNFTVKKNFKRHMIIHTQTNNCKFCKQIFTSKRHLDEHKCENAKFVCEKCNKKLISHTSLNRHMKLHDNPKPKNNKQQAVVGSLICEKCGEIFNTIYSLKQHLKSHMERQIFKCTFTGCLQTFNSIGLFETHKKNHIKLQVTCSTCQQVFKNKKALDVHLSVDHGNGIKNYYHCDKCDKSFLQLNNLKKHYKQSHVXXXXXXXXXXXXXXXXXXXXXXXRQNKFSCELCEKIFNSIHQLKRHKQTSHNGVIYSCPYCDMKVKHRYSLKRHLERQHNDLIEQWNQPNFIDTLTDKNENSTIVAPLP

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00132800;
90% Identity: -
80% Identity: -