Aerv007494.1
Basic Information
- Insect
- Aphidius ervi
- Gene Symbol
- -
- Assembly
- GCA_015776835.1
- Location
- MKYW01000067.1:36818-40475[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 15 1.1e-05 0.0011 19.2 1.1 1 23 154 176 154 176 0.97 2 15 0.00059 0.058 13.8 5.1 1 23 182 204 182 204 0.99 3 15 4.5e-05 0.0044 17.3 0.5 1 23 329 351 329 351 0.99 4 15 1 99 3.6 0.0 1 21 355 375 355 376 0.91 5 15 0.0029 0.28 11.6 1.2 6 23 409 426 407 426 0.96 6 15 0.0017 0.16 12.4 0.1 1 23 440 462 440 462 0.94 7 15 0.0021 0.2 12.1 0.6 2 23 472 493 471 494 0.94 8 15 0.0002 0.02 15.3 2.7 2 23 501 522 501 522 0.97 9 15 0.056 5.5 7.6 1.9 1 23 528 550 528 550 0.95 10 15 0.023 2.3 8.8 0.2 2 23 556 577 555 577 0.95 11 15 3.6e-05 0.0035 17.6 0.8 1 23 586 608 586 608 0.98 12 15 2.7e-05 0.0026 18.0 0.7 1 23 614 636 614 636 0.98 13 15 0.00035 0.035 14.5 0.5 1 23 642 664 642 665 0.95 14 15 0.082 8 7.1 0.1 1 23 679 701 679 701 0.96 15 15 6.5e-05 0.0064 16.8 0.2 1 23 1085 1107 1085 1107 0.97
Sequence Information
- Coding Sequence
- ATGGATCCTAATGAATTAAATCTTCAGTGGACAGAAGAAGAAGTAGTTCATCATGAAGAAGTATGTGGTCTTGATGGGGGCCACATGCAGGAGATGCAAATTATGGAAGGTGATGTTATTGGTGCATGTGAGGAAGTATCTGAAGGGGTGTGTATAGATGGTGAAGTACATGAAGAAACAATAATTCATACAACTGATGATCTTGGAACAAATACAAGTATAATGTTGATGCAACAAACTAATGATATGGAAGCAATGTATATACCACAAGATCAAACACATGATTATTTAAATATTCAAGTTACTGAAGAAGTTATAACTGATAATTGGGATCGTTCTGGTCCTGATGATGGAATTCATGTACCAGAAACAAAAGTATCTCATGATAATTTACTTGAATATGATGATATGGAAGTACCATTACAAAGTGAACAAGATGCATCAATATTATCACGTCCATTTCCATGTGATTTTTGTTCACGTCGTTTTAGTAAAAAAGCAAATTTAATGAATCACATGGTATCACATCAAACTGATCGTCCATATTCATGTCATTTTTGTGATGCAAGTTATATACGTAAATGTGATCTTGCAAATCATCGTAAAACACATGCTGTTGATCCAACAAATGATTTACTTGATGATAATTATGATGATACAGATTTATTAAATGATGATGATGATGATCATCATAATTTAATACCAGAAAGACGTAAAAAACAAACAACAACAACACGTAAACGTAAATATACAACTAAAAATACATCACCAAAACGTAATTATACAATAAATGAAAGTAAAAATATTGATAAATATAATCCAAATAGTTATAATTATAATGATATAATTGATATTGGTAATACAAAAATAAGTAATAAATATAGAACAACATTAACTGGTCCATCATCATCATCAAAATGGAATGATGAAATAGCAACAGTAGAACAAAAACCACGTTGGCCAATAACAGATGCAACAAAACCATATGTTTGTCAACTATGTGGTCTTGGTTGTGCACGTGAAACAGCATTAAGATCACATATGCGTTCACATCCACCATCATATGTATGTACAAATTGTGGTGATGGATTTTGGAGTATAAAAGAACTCAAAGAACATACACGTATTAAACNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCATGTGGTGTAATGTTTACACGTTATGAATCATTACAACATCATCGTAAAATACATGTTAAACAAGAATTAAATGATTTATTAGATGCATCATTACATGCATGTAATACATGTGGTGAAACATTTGATACAGCATTATTATTATTAGCACATGCTGAAATACATAGTGGTAAAAATTCACAAATACATAAACAATGTTTATCATGTGGTGAAAAATTTCGTAATGCTGATGAAGTTGCTGAACATGTACGTAATCATCATGGTAATGCATCACCAAATACATGTGGTCAATGTGGCAAACAATGTAAAGATAAACGTAGTTTATCAAAACATATTTTAGTACATAGTAATGATAAATCATTTACTTGTATTGAATGTGATAAAAAATTTTTATCAAAAGCACGTTTACGTAGACATAAATTATCACATGAAAAAAAAAATGTATCATGTGATGAATGTGGTATTGAATTTGAAAATGGACGTGCTTTAGTATCACATAAACATTCACATAAAGATACTGGTAATGGTAGAGTATTTCCATGTAATTATTGTTCAAAAACATTTGGTTCACGTTCATCACAACAAATACATGTACGTATACATACTGGTGAACGTCCATATAGTTGTAGTCATTGTTGGAAAGCATTTGCTGATGGTGGTACATTAAGAAAACATGAACGTATACATACTGGTGAAAAACCATATGCTTGTTCAATATGTTCACGTGCATTTAATCAACGTGTTGTATTACGTGAACATGTACGTGCACATCATTCACAACCAGATGCAGATCATAAAGATACATTAACACCATATTTTTGTGTAGTATGCGAATCATTATTTTCAACAGCTGATGAAATAATACGACATATTATACAACATTGTGATGCTAAAACAGCACAAAATAGACAACCACCAGTTGGTCCACGTAAATATAAACGTAGAAGAAAAACTAAAATTGATCAAATATTTTTAACAACAACAACAAAACCATCATCATCAACTAATAATTTAAATGACGACGATGATGATTATGATAATAATTATGTTAATAATAAATATGATAATTTTGTTGATGGTACATCAGATTCAGAAGAAAATACAAAACGTAAATTGGGAAAAAAATATAAAAAACAACAACGTAATATTATTGAACAAGAAGGATATGAAAATGTATTAAAATCATTTGAAAGTTCAATTAATAATATTGATGAAATTGTTGGTAATAGTAAATTAACAAGTAATAAAACTAAAAATAAAAAATTAAAATTAAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTAATAATAATATTAATAATAAATTAAATGATATACCATTAAAAAATCAATCTGGTAGACCAAAAATGATACATACACAAAAAACACGTGTACCTGTTGATATTGGTACTGATGGTGTTAAAAAAGGACAAAAAACTAAAACAATGGTTACAAGAACACCACGTGTTATGCCAAATGAACATAAAAGTGGTATATTTCCTGGTGGTGAACGTAATAGACCAAGAACTAAAAATGTCAGTTATCATGTTGATGGTAGACTACAAATTGTACCAGCTGTTTTTGAACCAAAAAAGAAAACAATTAAAAAAAATAAAAAACATTTAAAAACAACAAATATCAAACAAGAACCAATTGATAATAATAGTTATGAACAAATTAATAATAATAATGATATTAATGATAATTTATCATCAAGACTACAAGATGGTATTGATGATGATATTTTAAATACAAATAATAATATGGATATTGGTTTTAATGAAAATATTGTTGTTGTAAGTGGTATTGGACGTGAAGAAATAATATTACCTGATTTACAAAATGTTAATCATGAAGAAGAAATAATAACAAGAGATGGTAAACAACAAATAACACCACAAAGTTTATTATGTAGTAATATGCATATACCTGATGATAATGTTATTACTGAAACAATTGTTCCTGATTCAGTTGATTATCCATGTGATATGTGTGGAAATATTTTTTCAAGTCATAGTGAATTATCAGCACATGTTTCCATTCATATTTAA
- Protein Sequence
- MDPNELNLQWTEEEVVHHEEVCGLDGGHMQEMQIMEGDVIGACEEVSEGVCIDGEVHEETIIHTTDDLGTNTSIMLMQQTNDMEAMYIPQDQTHDYLNIQVTEEVITDNWDRSGPDDGIHVPETKVSHDNLLEYDDMEVPLQSEQDASILSRPFPCDFCSRRFSKKANLMNHMVSHQTDRPYSCHFCDASYIRKCDLANHRKTHAVDPTNDLLDDNYDDTDLLNDDDDDHHNLIPERRKKQTTTTRKRKYTTKNTSPKRNYTINESKNIDKYNPNSYNYNDIIDIGNTKISNKYRTTLTGPSSSSKWNDEIATVEQKPRWPITDATKPYVCQLCGLGCARETALRSHMRSHPPSYVCTNCGDGFWSIKELKEHTRIKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGVMFTRYESLQHHRKIHVKQELNDLLDASLHACNTCGETFDTALLLLAHAEIHSGKNSQIHKQCLSCGEKFRNADEVAEHVRNHHGNASPNTCGQCGKQCKDKRSLSKHILVHSNDKSFTCIECDKKFLSKARLRRHKLSHEKKNVSCDECGIEFENGRALVSHKHSHKDTGNGRVFPCNYCSKTFGSRSSQQIHVRIHTGERPYSCSHCWKAFADGGTLRKHERIHTGEKPYACSICSRAFNQRVVLREHVRAHHSQPDADHKDTLTPYFCVVCESLFSTADEIIRHIIQHCDAKTAQNRQPPVGPRKYKRRRKTKIDQIFLTTTTKPSSSTNNLNDDDDDYDNNYVNNKYDNFVDGTSDSEENTKRKLGKKYKKQQRNIIEQEGYENVLKSFESSINNIDEIVGNSKLTSNKTKNKKLKLKXXXXXXXXXXXXXXXXXXXXXXXXXXXXNNNINNKLNDIPLKNQSGRPKMIHTQKTRVPVDIGTDGVKKGQKTKTMVTRTPRVMPNEHKSGIFPGGERNRPRTKNVSYHVDGRLQIVPAVFEPKKKTIKKNKKHLKTTNIKQEPIDNNSYEQINNNNDINDNLSSRLQDGIDDDILNTNNNMDIGFNENIVVVSGIGREEIILPDLQNVNHEEEIITRDGKQQITPQSLLCSNMHIPDDNVITETIVPDSVDYPCDMCGNIFSSHSELSAHVSIHI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00132762;
- 90% Identity
- -
- 80% Identity
- -