Aerv009276.1
Basic Information
- Insect
- Aphidius ervi
- Gene Symbol
- -
- Assembly
- GCA_015776835.1
- Location
- MKYW01000106.1:12511-13884[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 2.4 3.7e+03 -2.4 0.0 21 37 96 113 96 116 0.67 2 3 8.5e-13 1.3e-09 37.5 0.1 3 41 213 250 211 254 0.93 3 3 0.76 1.2e+03 -0.7 0.0 27 34 249 256 249 258 0.87
Sequence Information
- Coding Sequence
- ATGCCAAGATCACAATTTGATTGGATACCATTAGAGCTACCATTACAACAACAACCGTATCAACAACCGCAACAACAACAACAACCACAACAACAAAAAAAAAGAAAAACGCGTAAAACAAGAGGAAGAAAATTAATAAATGAATATGTTTGTAATATATGTGGAAAAAATTTTTTAACAATACATAGTCTTAAATCACATCAAAGACGTTATTGTGGTGTACCAAGAAACATAAAATGTGGTCATTGTAATCATCGTTGTAAACGTGTTTGGGATATGAAAGTACATCTTGCTGGTGTGCATGGAATAACAAAATCAAATGTTTTAATGAATCATTTACAAACTGGTCATGGAATATATATTGTGGATAGTAAGACATTGTTACAACCATCAACAAGTCTTAAATCAGAAGCTAGATTTACATGTAACAAGTGTTATAAAACATATAGATGGAAAACTCATTACAATGAACATCGACGTACTGATTGTGGAAAAGTTTGTTATTTTGGTTGTTCATATTGTGGATATTGTACAAACAAAAAATGGAATCTTAAACTTCATTTAAAACGTAGACATCAAGCTCTATTAACATCAACAAATCGACGAAGACATCGACGTAAAAAACTATATAGCTATGATAATTTAAATAAAGCTCTGACTGCTGTTTCAATGGGTTTATCATTCAGAGAAGCTGGAAGACAATATGCAATACCAAGGACAACATTACAACGTTATTTTAAATTGGGAATTCCAATATCAACATTAGCAAGATTGGATAATAAAAATGGAAGAATATAA
- Protein Sequence
- MPRSQFDWIPLELPLQQQPYQQPQQQQQPQQQKKRKTRKTRGRKLINEYVCNICGKNFLTIHSLKSHQRRYCGVPRNIKCGHCNHRCKRVWDMKVHLAGVHGITKSNVLMNHLQTGHGIYIVDSKTLLQPSTSLKSEARFTCNKCYKTYRWKTHYNEHRRTDCGKVCYFGCSYCGYCTNKKWNLKLHLKRRHQALLTSTNRRRHRRKKLYSYDNLNKALTAVSMGLSFREAGRQYAIPRTTLQRYFKLGIPISTLARLDNKNGRI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -