Acol002165.1
Basic Information
- Insect
- Aphidius colemani
- Gene Symbol
- grn
- Assembly
- GCA_030523065.1
- Location
- JAPYYR010000338.1:3239-34158[-]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.6e-19 5.4e-16 57.8 4.7 1 35 430 463 430 464 0.98 2 2 9.2e-18 1.9e-14 52.8 5.6 1 35 487 520 487 521 0.97
Sequence Information
- Coding Sequence
- ATGGACATGACTAGTGAGTCGAGCGCGGCCCGGTGGTATGAACCACCGAGAACCAGTCTCGAACCACCTTCTGGCAGTGGTAATGGGGTTACTGGAGTCGTGGGTAATCCAGATTACAGAGGTTACTATCCACATGCTGGACCAGCTCCTCATCATCCAGCAGCAGCTCACTATGCACACAGCAGAATGTCTGGTAGTGGAGTATCAAATGGACCAGTTGGACAAGTGTGTCGTCCACATTTTCATGGTTTACATCCATGGTTAACAAGTACAGGTGATACATCAAAAGCTTGGGGTTTTccatcaacaacagcatctACAGGTGGTGGTGAAGATAAACCACAAAGTCCACTTGGTTCATCATTAGCACCAACAAGTGGTAGTTTATCAAATCATAATGGTACTGCCAGTGGTggtcatcatttattttcatttccaccaacaccaccaaaaGATGCGACGCCTGATAGCATAACAAATAGTACTagttcaacaaataataataataataatagtaataataataataacattaattcaacaagcaataataacaataatagtaatagtacaaacaacaacaacaacaacaataatggaAATAGCAATACACTTGGCTTGGGAGATAGTAATTATCAAGTAGCAGTTGCACATGCAGCAGCAATGGCTGGTGCATTTATGCATCATCAAGATACATTGGGTGGTACATCAAGTGGTTCATGTGATGTTAAACCATCATTGATGCTTGGACATCATCATGGtgcaccatcaccaccacatcaacatcaaaataatggtggtggtaatggtgGACAAGTTAAACAACGTGAAGGTAATAATCAAAATggaaatacaacaaataataataatacagtcaacaacaataatcaaaCAACAAACCAACAAGCGAACACCaatcagcaacagcaacaggaTTATCAAAATCCTGGTGGTACAACATCACCCTCATGCAGAGATTCCTATCATCCTTCatcccatcatcatcatcatcatcattcatcCTCTGGATCACAGTATGATCCAACTGGAAGTGCCTATAATATGTATCAACATCTACAATATCCAACTCATCATTCACATAATCCACACAATGgtacatcaatattttcaaattcccATCATTCAACAACTGGTGTACCTGGTATTAGTCCTGACTCAAAACTTCTTGGTTCCACGCATGGCAACACCCCAAATTCACCCGGTTCCCAACATCAGCAGCAGCAAAAACCAAGGAACAAATCCAGAACGTCCGCCGAGGGTCGTGAGTGTGTCAATTGTGGTGCAACATCAACACCTTTATGGAGAAGAGATGGAACTGGCCATTATCTCTGCAATGCTTGTGGGCTTTACTACAAAATGAATGGGCAAAACAGACCGCTGATTAAACCCAAAAGACGTCTgTCACTTCAAAGTGCAGCAAGAAGAGCAGGCACAAGTTGTGCAAATTGTAAAACTGCAACGACGACGTTGTGGCGAAGAAATCAGGCAGGTGAGCCTGTATGCAACGCGTGCGGCCTTTATTACAAACTTCACAACGTTAACCGACCATTGACGATGAAGAAGGAAGGAATTCAAACGAGAAAtcgtaaattatcatcaaaaagtaaaaagaaaaaatctggTGGTTGTTTAGGTCTTGGTGGTGTCATGGGTGATATGATCAAAGCAAGTAGCCACTTGGATATGGACAACAAACCATTTCACACTGGATTCGGCTCACCAATGGGCACAACACAGCATCATCATGCAATGCATCCTGGACTACAGCATTACATGTATCATCCAGGTGTCGGTGTCACGGGTGGTCTTCATCAGGGTTTTGcaccaccagcaccaccaTCAATTCATCCTCATTCACATCCACATTCTCATTCACATCACATGTCAAGTCTATCGAGTCTTCAACTTGCATCAACGAACGGCATGGGTACTTGGCGAGGTGACTACACATGA
- Protein Sequence
- MDMTSESSAARWYEPPRTSLEPPSGSGNGVTGVVGNPDYRGYYPHAGPAPHHPAAAHYAHSRMSGSGVSNGPVGQVCRPHFHGLHPWLTSTGDTSKAWGFPSTTASTGGGEDKPQSPLGSSLAPTSGSLSNHNGTASGGHHLFSFPPTPPKDATPDSITNSTSSTNNNNNNSNNNNNINSTSNNNNNSNSTNNNNNNNNGNSNTLGLGDSNYQVAVAHAAAMAGAFMHHQDTLGGTSSGSCDVKPSLMLGHHHGAPSPPHQHQNNGGGNGGQVKQREGNNQNGNTTNNNNTVNNNNQTTNQQANTNQQQQQDYQNPGGTTSPSCRDSYHPSSHHHHHHHSSSGSQYDPTGSAYNMYQHLQYPTHHSHNPHNGTSIFSNSHHSTTGVPGISPDSKLLGSTHGNTPNSPGSQHQQQQKPRNKSRTSAEGRECVNCGATSTPLWRRDGTGHYLCNACGLYYKMNGQNRPLIKPKRRLSLQSAARRAGTSCANCKTATTTLWRRNQAGEPVCNACGLYYKLHNVNRPLTMKKEGIQTRNRKLSSKSKKKKSGGCLGLGGVMGDMIKASSHLDMDNKPFHTGFGSPMGTTQHHHAMHPGLQHYMYHPGVGVTGGLHQGFAPPAPPSIHPHSHPHSHSHHMSSLSSLQLASTNGMGTWRGDYT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00132320; iTF_00132899;
- 90% Identity
- iTF_00132899; iTF_00132320;
- 80% Identity
- -