Basic Information

Insect: Aphidius colemani
Gene Symbol: -
Assembly: GCA_030523065.1
Location: JAPYYR010000725.1:1-6702[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 0.19 16 6.1 0.2 3 20 138 155 136 157 0.93

2 15 6.2 5.2e+02 1.3 0.2 6 20 521 535 520 536 0.90

3 15 0.00098 0.082 13.3 0.4 2 23 546 567 546 567 0.96

4 15 0.055 4.6 7.8 0.7 1 22 766 787 766 791 0.92

5 15 0.096 8 7.0 0.6 2 23 795 817 792 817 0.92

6 15 0.013 1.1 9.8 0.3 2 16 844 858 843 859 0.93

7 15 3.5 2.9e+02 2.1 0.0 6 23 860 877 859 877 0.91

8 15 0.26 22 5.7 1.0 1 23 883 908 883 908 0.92

9 15 7.3 6.1e+02 1.1 5.2 2 23 918 940 917 940 0.95

10 15 6.5e-05 0.0055 17.0 0.5 1 23 1013 1036 1013 1036 0.97

11 15 1.6 1.4e+02 3.2 0.4 1 21 1173 1193 1173 1194 0.89

12 15 0.0035 0.29 11.6 2.1 3 23 1203 1223 1202 1223 0.97

13 15 1.6 1.3e+02 3.2 2.3 1 19 1236 1254 1236 1259 0.78

14 15 0.04 3.4 8.2 0.1 3 23 1428 1449 1426 1449 0.96

15 15 0.0021 0.17 12.3 1.3 1 23 1494 1517 1494 1517 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	0.19	16	6.1	0.2	3	20	138	155	136	157	0.93
2	15	6.2	5.2e+02	1.3	0.2	6	20	521	535	520	536	0.90
3	15	0.00098	0.082	13.3	0.4	2	23	546	567	546	567	0.96
4	15	0.055	4.6	7.8	0.7	1	22	766	787	766	791	0.92
5	15	0.096	8	7.0	0.6	2	23	795	817	792	817	0.92
6	15	0.013	1.1	9.8	0.3	2	16	844	858	843	859	0.93
7	15	3.5	2.9e+02	2.1	0.0	6	23	860	877	859	877	0.91
8	15	0.26	22	5.7	1.0	1	23	883	908	883	908	0.92
9	15	7.3	6.1e+02	1.1	5.2	2	23	918	940	917	940	0.95
10	15	6.5e-05	0.0055	17.0	0.5	1	23	1013	1036	1013	1036	0.97
11	15	1.6	1.4e+02	3.2	0.4	1	21	1173	1193	1173	1194	0.89
12	15	0.0035	0.29	11.6	2.1	3	23	1203	1223	1202	1223	0.97
13	15	1.6	1.3e+02	3.2	2.3	1	19	1236	1254	1236	1259	0.78
14	15	0.04	3.4	8.2	0.1	3	23	1428	1449	1426	1449	0.96
15	15	0.0021	0.17	12.3	1.3	1	23	1494	1517	1494	1517	0.94

Sequence Information

Coding Sequence: ATGGCACGTGTCACTGTTTACACAGGACATCTAAATGTTATTCCTATTATCGAGTCATCACCAAGGCCATTGGTCATCACAATAAAAGAAGAACCAATAGATCCATcagaaacaaatataaatgaagAATCAACAACAGataataatgcaaaaattaattcaattgattttaaaaaaaatacaacaccatcaacatcaaaaaataatcaacaattagaattaaataatgacaCAAAAAAACCACCagctaaaaagaaaaagctagatgataaaaagaaattaatagataaaaatgaacaacaaaaattgcCTACTAGATGTACTAGAAGTCGTGAACATTCATTgataaaagataatattaatacaaaattatgtaaaaaaattgaatcttcTAATTTAGGTTCATTGTTTTGTAGTGTTTGTTCAAGTGACTTTGCTAGTACTGCAACATTACAACgtcatcaattgttttatgAACAAAAATTGCTAAGATGTCCACTATGTAGAGTTTTGTTTGAATCACCTGATATATGGTTGAAACATCAAAtagataatcataaaaaatattatgcaaATGAACAAAATAGAAGAAGATATCAATGTAATTGGTGTTGTgctttttatacaaaaaaacgTGGATTACAACAACATATTCATCACTGTCATGCTCAAAatgtaattaatgaaaaaccaaaaaattataaaaaaaaaccaaaatctAAAAGGGCAATTGATATATCAATGAAAAGACGTCatagagaaaaattattaaatcagcAAAGGCTTAAATTAAAAGCATTAgaatacactgaaaaaataaataaaaataatgtaaatttaaataaagaaattggaAAATCATTGGTAATCAATGATTCAattgaacaacaaaataataatgagctGAATGAACATTTACATAtgcaaaaacaatttaataataatatacaatcaAGATCTGGTGCAAGTAGTCCATTGGTACAAATACATGCTATTCCAAAAGAACTTGAAGCATTACTTGGTGATTGTAATGATCGTCCCGCTACAAATTCAAGATCAAAGAGTTCCGAAAAAactattgttgataatagaaaaaatttaaataattcaaatattcaaataacatcatcaccagtatcattatcatcacgaCCACCATTATCACGTTCATCAGCAAGAATAATTCAAAgtttacaacaacaatataactGTCGTGgctttaatattattctgGAAAAAGTACGTCTAccaaaagatagaaaaaatattaataataaaaataatgatgatgatgatgatgatgatgataatgatgatgataataataaaaaaataaataacactgATAGTGTATATCAACGCCCAATTGATCTTGAATTACGTAACTTAGATATTgcattaaaacaattgaaaaaaccaaatatagaaaataatgactttaataatgaaacaatgaataaagaaaatttacctgataaaaattatttaattaataataatacaaatgaaaaaatgacaaaaacaataaaattaaataaatatatttatagatcaAGTGCATGTCGTTCacgttttacaaataaaaataaattaataaatcattatttatgttttcatACGAGTTCAAGTAATCGTGAATGTGGTATTTGtcgtataaaatttataaattcaggtaaattaaaaaaacatttactattacattgtattaaaattgttgCATCAAAACATGATCATTCACCAATTGACGCCAAAGGACCATgtgaaacatataaaaaaaaatatatgtgtattgGTTGTAAGAAACGTTTTTGGTTATCATCATGTATGAACAAACATATACAACATTGTagattttataaagaaaaaactgtCAACAAATcaccatcaaaaaataaacgtcTTGTTGAAAAATCACTAGTCATAAATGATGATACAATGACAAAAGaatcaacaacaccaccatCTACAACTCCAAcaacatcaccaccatcaccaccatcaccaccatcaccaacaacaccaacaacaccaacaacaacaccaccaataaaaaaaaaacgtcttattgaaaattcaccagttgaaaatgacattaatcaagataataaattattaataccaaCAACACGTACTTCTCGAAGATTAtctgaaaaaatgaaaaataacaattcatatgaacaaaatgaaacaattgaagaaataccaaaagttaataatgaaaataataataacccattattatttagttttatacCAGTACCATATCGTCCAGCTTGTGTTGCTGATGTCAATGGATATTTGTGTAGTATATGctatacatatttttcaactgaagaatttttaaatgatcatAAACGGGTATTCAATGCACATGAATGTTCAATGTGTTCAATATGtggtatattttttccttcagAAAATTTACGTAATGCACATACAAAAGCAACTCATTGTGAAGAATTATCATCTTTATCGTCATcgtcatcctcatcatcaacaaaaacaaaaacatcacACCATTTAAAGCTATCATGTCCAGTATGTGATcaaaattttacaacaaaaacaaatttactatgtgaagaaaaattttcatcatcaatattattattagaacaTGAAGCTGAACATAGTTATAATGGTAATTTTGCATGTCATTATGATGATTGTTTTAGAAAATTTGGTACAATTGTTGCATTAAATgatcatcaatatttaacaCATCAAactgataatattgttaaacgTATGAAGTGTTCAATTTGTTCTAATAAATCACGTACATTAAAATCATGGATACatcatttaaaacattttcattatgataaatatgataattcagtatcagaattttttttagaaattaattcaaataatattattgatattattcttaatttaaataaacccATTGAAAAAGATCCAttagaaattgataaaaatttacattcaattaATGACAATGGAATTGGTGACATGTTATGTGATGCTGAGactgatattatattaaatccACCATTACATACACACATTGAATATACATGTGCAATAtgtgatgaaaattttgtatctgaatttgaattgaaaaaacatcGTAACAGTAGTCATCCaccaaatgatttaatttgttatgaCAAAACTGAtggttttaatgaaatttcaataagaaataataatcaacaacaagaaaattatcaagctgaatcattaaataatgatggactaacacaacaacaaacatTGACATATATATCAAgtgaaattgataataatatttcaaatcaacaacaattagcttatgataatgataatacgtcattatttatatcaaatataagATCAGTTGATTTATCagcatatgaaaatttaacaaactctacaaatgtatatcaaaataattcaacatctcaatcattattatcgacaacaacaccaccaccattacGGCTACTACAGCAGCcaaatttttcattgccaTCTTTATCATCACAACAACCAGCTTTACAGCCACCAAAATATGCATGTCCAGATTGTTTAGcatcatttaattgtttaaaaacattattaagtcatcaaattaaatattcaaattctgGAACAAATATATGTGATCAATGCGGAAGAAAATTTGTACATACTAAAGCATATCGTGAGCATTTATCAAAACATgaaaatcgtaaaaaaaaaccactatATTCATTGCTacattattgtaaaaaatgtgATGAAGCATTtgcatcatttttatcaaaacgTATTCATTTTGCACATATACACAAAACATTATTAGATGATCCAATAAATGATACACGTTATTTACCAGTAAGTAGTAATTCTGAATCTGATAGTTTAATTcaacatcaacatcaacatcaacatcaacatcaacattcaacatcaacatcaacatcaacatcaacatcaacatcaacatcaacatcaacatcaacatcaacatcaacatcaacatcaacatcaacatcaacatcatcaacaacaacagttcAATCACAACCACGACAAATTGAAGAGGTTGATTTAACtgaagatgatgatttttgtAATCCCCTTGAATCACAACAACCAATATATTCTGAAGCATTAATATCTACAGTTGATCCAATATCACAGAAAGCATATCAGCcacaaattgataatgatacaccatcaacatcaatacCACATGCACAAATTAATGAAactgataaatcatcaaatacaGATTGCATAACAACACAAGAAATTGCAAATTCACCAGATATTTATGCTCATTCATTGGCATGTACATTGTGTGGtcaaatatcaacaaatgttgaagcattatttttacatcttAAAAAAGTACACAATTTATTGCCACCAACTAAAAATGATACAGTACAAGCTAATAATGACTGCAATATATTTCTTGATGATCAAAATGGTATTATGTTTTCACAGCCATCTTCAATTAGCCAGCTATTAAAAGTACAAGAACTacataattgtaaaatatgtaATGTAAAATTTGCAAATGAAGAATCATTAagaatacataataataaagaacACAATGACTTGAgcgatgaattaaataaacaaataaataatgagctcataattatagataaaaatgatgataatgaatcaAGTAATTCAGAATTAATTGCAAATACAAatgat
Protein Sequence: MARVTVYTGHLNVIPIIESSPRPLVITIKEEPIDPSETNINEESTTDNNAKINSIDFKKNTTPSTSKNNQQLELNNDTKKPPAKKKKLDDKKKLIDKNEQQKLPTRCTRSREHSLIKDNINTKLCKKIESSNLGSLFCSVCSSDFASTATLQRHQLFYEQKLLRCPLCRVLFESPDIWLKHQIDNHKKYYANEQNRRRYQCNWCCAFYTKKRGLQQHIHHCHAQNVINEKPKNYKKKPKSKRAIDISMKRRHREKLLNQQRLKLKALEYTEKINKNNVNLNKEIGKSLVINDSIEQQNNNELNEHLHMQKQFNNNIQSRSGASSPLVQIHAIPKELEALLGDCNDRPATNSRSKSSEKTIVDNRKNLNNSNIQITSSPVSLSSRPPLSRSSARIIQSLQQQYNCRGFNIILEKVRLPKDRKNINNKNNDDDDDDDDNDDDNNKKINNTDSVYQRPIDLELRNLDIALKQLKKPNIENNDFNNETMNKENLPDKNYLINNNTNEKMTKTIKLNKYIYRSSACRSRFTNKNKLINHYLCFHTSSSNRECGICRIKFINSGKLKKHLLLHCIKIVASKHDHSPIDAKGPCETYKKKYMCIGCKKRFWLSSCMNKHIQHCRFYKEKTVNKSPSKNKRLVEKSLVINDDTMTKESTTPPSTTPTTSPPSPPSPPSPTTPTTPTTTPPIKKKRLIENSPVENDINQDNKLLIPTTRTSRRLSEKMKNNNSYEQNETIEEIPKVNNENNNNPLLFSFIPVPYRPACVADVNGYLCSICYTYFSTEEFLNDHKRVFNAHECSMCSICGIFFPSENLRNAHTKATHCEELSSLSSSSSSSSTKTKTSHHLKLSCPVCDQNFTTKTNLLCEEKFSSSILLLEHEAEHSYNGNFACHYDDCFRKFGTIVALNDHQYLTHQTDNIVKRMKCSICSNKSRTLKSWIHHLKHFHYDKYDNSVSEFFLEINSNNIIDIILNLNKPIEKDPLEIDKNLHSINDNGIGDMLCDAETDIILNPPLHTHIEYTCAICDENFVSEFELKKHRNSSHPPNDLICYDKTDGFNEISIRNNNQQQENYQAESLNNDGLTQQQTLTYISSEIDNNISNQQQLAYDNDNTSLFISNIRSVDLSAYENLTNSTNVYQNNSTSQSLLSTTTPPPLRLLQQPNFSLPSLSSQQPALQPPKYACPDCLASFNCLKTLLSHQIKYSNSGTNICDQCGRKFVHTKAYREHLSKHENRKKKPLYSLLHYCKKCDEAFASFLSKRIHFAHIHKTLLDDPINDTRYLPVSSNSESDSLIQHQHQHQHQHQHSTSTSTSTSTSTSTSTSTSTSTSTSTSTSTSTSSTTTVQSQPRQIEEVDLTEDDDFCNPLESQQPIYSEALISTVDPISQKAYQPQIDNDTPSTSIPHAQINETDKSSNTDCITTQEIANSPDIYAHSLACTLCGQISTNVEALFLHLKKVHNLLPPTKNDTVQANNDCNIFLDDQNGIMFSQPSSISQLLKVQELHNCKICNVKFANEESLRIHNNKEHNDLSDELNKQINNELIIIDKNDDNESSNSELIANTND

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -