Basic Information

Insect: Aphidius colemani
Gene Symbol: salm
Assembly: GCA_030523065.1
Location: JAPYYR010001885.1:1-7901[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 7 4.2e-06 0.00035 20.8 0.9 1 23 495 517 495 517 0.98

2 7 8.3e-06 0.00069 19.8 2.1 1 23 523 545 523 545 0.98

3 7 0.95 79 3.9 3.7 3 23 1112 1132 1111 1132 0.93

4 7 3.6e-08 3e-06 27.3 0.6 1 23 1138 1160 1138 1160 0.97

5 7 0.00011 0.0095 16.2 3.4 1 23 1170 1192 1170 1192 0.98

6 7 0.0017 0.15 12.5 1.9 2 23 1627 1648 1626 1648 0.97

7 7 0.082 6.8 7.3 1.4 1 13 1654 1666 1654 1666 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	7	4.2e-06	0.00035	20.8	0.9	1	23	495	517	495	517	0.98
2	7	8.3e-06	0.00069	19.8	2.1	1	23	523	545	523	545	0.98
3	7	0.95	79	3.9	3.7	3	23	1112	1132	1111	1132	0.93
4	7	3.6e-08	3e-06	27.3	0.6	1	23	1138	1160	1138	1160	0.97
5	7	0.00011	0.0095	16.2	3.4	1	23	1170	1192	1170	1192	0.98
6	7	0.0017	0.15	12.5	1.9	2	23	1627	1648	1626	1648	0.97
7	7	0.082	6.8	7.3	1.4	1	13	1654	1666	1654	1666	0.94

Sequence Information

Coding Sequence: atgagTTTAGTGAAATGGAGTATTACAAAACGATTAAATGGTCCAACTAAAAACCAATTAAAACGTAcatatgatatattttcacAAGATGAGAATGATACGGGATCAGAAAATGAAGATACGCAGATAGCGGAAGAAGAAGCTGTAGATTTAACATCAAATAGATCATCACATCATGGAGAGGGTGATGATGAAAGAGAAGCATTAGAATCACCAAtggatgaagatgaagaagacgataataatatagatgatattgataatgatgctCATGATGATCCTGTTAATAACGAtcctgctgatgatgatgatgatgatgatgatgatgatgaaaattcaaaaaaacaaattaaaaatcttcaagacgcagaaaataataatggtgatttattttcattggtaTCTGGTAATCCTAGTCATGTGACACTTGAAGCATTAGAAAATACAAAAGTTGCTGTTGCACAGTTTGCAGCAAAAGCATTAGCTGGTAAGACTGATGAAGCTGCATTACaagatattcaaaaaatagaaaatagttTTCATGAATTACAATTTCAACAAGTATTTCAATTAAGATTAATTAATGACTTACAAGAACAATTATCACATAAAAAACCTGGTGATAATATTAAAGAAGAATGTAGCGGTCGTACATCATCAGTTACATCGCCTTTAGGACTTTTATATCCAAAATCAATATCAAGTTTAACATCACCACCATTAACAATACCATCATCactattattaacaacaactaTAACATCACCATCAACACCAATGACAACGCCAAcgataacaacaacaatgccAACAAatacattatcatcaatttgtaCTGGTACAGCAATaccatcatcagcatcagTAGCAGCAACATTAGCAGCAACGATTGCATCAAGACCAATACTTCATCATCTTAATATGATGACATCATCAAGTTGTTCAACAACGTCAACGTCACCAGTGACTGTAATATCAGCTCCAAGCTTCACAAGTCATCATGATGATTCTCGTTCAAATAGTTTATCACCAATATCACTTGTATTACCAATAACGTCaatgtcattattatcatcaacatcagcaACATCCACATCAACAACGTCAGCAGCAACAACGCCAATAAcgtcgtcgtcatcatcatcaattattgataCAACAGCTGCAGCACCAAcgataacaacaaataataatgataataataatccattAAATATGTTACCATCACATCCAGGTTTagcatcaatatcatcatcattagcatcaacaattataacaaataatgatCCATTACCACTTAATGAACCAAATACATTGGAAATGTTACAAAAACGTGCCCAAGAAGTACTTGACAGTGCAAGTCAAGGTTTATTAGCAAATAATTTAGCAGATGAATTAGCATTTAGGAGTGGTAAAAGTGGTTCACGTTTATCACCATATGATTCAAAATCATCTAATGGACGTGGTGAGCCATTCTTCAAGCATCGTTGTCGTTATTGCGGCAAAGTATTTGGCAGTGATTCGGCACTACAGATCCACATTAGATCACATACAGGTGAGCGTCCATTTAAATGCAATGTATGTGGAAGCCGTTTCACTACCAAAGGCAATTTAAAGGTTCACTTTCAACGGCATACTGCTAAATTTCcacatattaaaatgaatcCTAATCCTGTGCCTGAACACCTTGACAAATATCATCCACCTATATTACAACAAATGGCTGCCTCTGGGCAACGTCCATTGTCATCACCACCATTACCCCCACCTCTTCCACCACCACCGCTACCAGCACTACCATCAtcattacaacaacaacaacaacaacatcaacaacaatcaccaccaccaccacctccaccactacagccaccatcatcattatcaacgacaacaacagcaacgacatcgtcattattattgtcaacaacatcaacagcaacaccAACGAAATCATCCTCACCCATAATTGTTCCCGGTGGTGTtccaaatacaaaaaatttacattcacCATTTCGTCCACAACAACAGCAATCACCTTGTTTATTACCACCAACAACGCACGGTTTTTTAAGTCCTCAACCACCCTTACCAATGAATATTGCATTACCAATTACAGCTGGTGTTGGTGTTTTACCATCCCTTTATCATCGTCttccaattataaataattgtattggtgctattaataataataataatattaacaataataatgatgatgatgaacaagAATTACCTGAAAATTTAagtaaatcaacaacaacagcaacaacaacaatgccAACAgaaacaatatcaacaacagcTCCAACgatattatcatcaagtgtatcaacatcaacaacaacatcaccaTCAAATTCACCCCGCTCATCACCTTTATCATTATCCATGCGACCATCCTCAACATTACCAACTACTACCTCCttgttaaataacaataatatcaatcatcgtaataataacaataatactcCAATTCATTCCTATCatctacaacaacaacaacaacaacaacaacatattAATCATAGTGAAACATCACGTGACAGTATTATAAAACGTGAACAACAATCATCACCAGAACCAAGACCAATGAGTTGTGATAATAATGACGATAATATGCaaataataccaaaaaaagAACCAGAAGaaacaattgatgaattacCAGATGAAGAATCAGAAGAATTATATGAACCATTATCACCAGCATCACGTAATAGATATTTAGATCATACAGTATCaatgaattatcatcaaaatattattaatgaacgTATGTCACAATCACAACAATTACATCTTCAGCATCAACAATTACAGCtacatcatcataataaagaacaaagacaacaacaacaatcatatGAAGATTGTAGTATGGACAGTAGTAAAGTAAGTGGACAAtgtattgatgatgaagatgaagaaatgGATGAACAACCAGAAAATTTATCAGCACGTGAACCATCAATACGTCATTATCaacaatcattaaattatcataatcaaTCTGGCACATCACCAGCAAGTAGTACAGCATCAAGTGGAAGTTTACAAACATCATTTGCTGGCTTATTATATCCTCCAGTACCAACGTTACAAAATCCTAATCATCATCAATCACATAAtgctaaattaaataataatgaaaatatgatGGTTGATCCAGCACGTGATCCAGCagtatattcaaatttattaccaCGTCCAGGTAGTAATGATAATTCATGGGAAAGTCTTATTGAAATAACTAAAACATCTGAAACATCAAAATTACAACaacttgttgataatattgagcATAAATTAACTGATCCAAATCAATGTATAATTTGTCATCGTGTATTATCATGTAAAAGTGCATTACAAATGCATTATAGAACACATACTGGTGAACGTccatttaaatgtaaaatatgtgGACGTGCATTTACAACAAAAGGCAATTTAAAAACACATATGGGTGTACATAGAGCTAAACCACCATTACGTGTATTACATCAATGTCCAGTatgtcataaaaaattcacaaatacATTAGTATTACAACAACATATACGTATACATACTGGTGAACCAACAGATCTTAGTTTAGAACAAATACAAGCTGCTGAAGTTAATGATTTTCCACCGGGTTATCCACCACATCATCCACTTGCATCATTTTTACCACAAGGTTTTCCTGGTTTACATAGTGCTCCTGGTGGTTTCCCAATGGGTTATCCACCGACGAGACATTTATCAATGGAACATCATCCATCACATGAGGATATGGATATTAAAGATAGAATAACAGCACATTATAATCATCAACGTTATATTGATGAACAATCAGAAGATATGATGGATGATCaggatgatgttgatgatgaaaataatgaagatgatggtattgatgaagatgatgatgaacgaAATCAACGACATCaacatcttcttcttcttcatcatcagcgtcaacagcaacaagaacaacatctacaacaattacaacaactacaacaacaacaacaacaacaacaacaacaacaacaacaacgtgaTAATGATATTATATCACATTGTGATGAATCACGTGACAAACgtgaattaaatgatattaatgatgaagataatgaagataatgatgatgatattgataatgatgataaaaagacTGAacgaaatgataataaattaatatcatcaatgcctattaatttttcaacatcattAGCTGCACTTGAAAATCAAGTGCGTACCATAACAACAATGGCCACATCAGCTAGCTCAGTATCATCACTAGATAAATATCATTGTAGTGAAAAAAGTTCAAGTCCAGTAAGTTCAATTATTGGTACACCACTTGATTTAACACCACGGGCATCATCGTCACCTGGATCAATTGtatcaacatcaacaccaccaccaccaccactactgCCACAATTGCCTTCATCAActgcagcagcaacaacaaccacaacagcagcaacaacaacaaccacatcGGCAGTAGCAGCAGCATCAGCAACAAATACTCAACATCAAAATCCATTTGGTATGTTTGCTGGTATAATACAAgctgtatcatcatcatcgtcatcagcatcatcaacatcatcatcatcaccaaataatatacaaacatCAAGTAGTactgttggtgttggtgttaaTAGTAGTAATAGTGGTACTGGTGATGGTAATGGTAATGGTAGTGGTACTACTGGTGTTGGATCATCAATGAACGTGATCAATCCAGCAACTGGTGGAAGCGGTGGTGGAGGAGCACTTGCTTCACTAACAACATCCGCCGTACTTGCTGCCACATCGACCTACAATCCGCTCGGTCTCGCTGTTGGAGGCCCAGCAGTACGTGGCAACACAACGTGTAATATCTGCTACAAAACATTTGCGTGTAATTCAGCACTGGAGATACATTATCGGAGTCACACGAAGGAGCGACCATTCAAATGCACTATTTGTGACCGTGGTTTTTCAACAAAG
Protein Sequence: MSLVKWSITKRLNGPTKNQLKRTYDIFSQDENDTGSENEDTQIAEEEAVDLTSNRSSHHGEGDDEREALESPMDEDEEDDNNIDDIDNDAHDDPVNNDPADDDDDDDDDDENSKKQIKNLQDAENNNGDLFSLVSGNPSHVTLEALENTKVAVAQFAAKALAGKTDEAALQDIQKIENSFHELQFQQVFQLRLINDLQEQLSHKKPGDNIKEECSGRTSSVTSPLGLLYPKSISSLTSPPLTIPSSLLLTTTITSPSTPMTTPTITTTMPTNTLSSICTGTAIPSSASVAATLAATIASRPILHHLNMMTSSSCSTTSTSPVTVISAPSFTSHHDDSRSNSLSPISLVLPITSMSLLSSTSATSTSTTSAATTPITSSSSSSIIDTTAAAPTITTNNNDNNNPLNMLPSHPGLASISSSLASTIITNNDPLPLNEPNTLEMLQKRAQEVLDSASQGLLANNLADELAFRSGKSGSRLSPYDSKSSNGRGEPFFKHRCRYCGKVFGSDSALQIHIRSHTGERPFKCNVCGSRFTTKGNLKVHFQRHTAKFPHIKMNPNPVPEHLDKYHPPILQQMAASGQRPLSSPPLPPPLPPPPLPALPSSLQQQQQQHQQQSPPPPPPPLQPPSSLSTTTTATTSSLLLSTTSTATPTKSSSPIIVPGGVPNTKNLHSPFRPQQQQSPCLLPPTTHGFLSPQPPLPMNIALPITAGVGVLPSLYHRLPIINNCIGAINNNNNINNNNDDDEQELPENLSKSTTTATTTMPTETISTTAPTILSSSVSTSTTTSPSNSPRSSPLSLSMRPSSTLPTTTSLLNNNNINHRNNNNNTPIHSYHLQQQQQQQQHINHSETSRDSIIKREQQSSPEPRPMSCDNNDDNMQIIPKKEPEETIDELPDEESEELYEPLSPASRNRYLDHTVSMNYHQNIINERMSQSQQLHLQHQQLQLHHHNKEQRQQQQSYEDCSMDSSKVSGQCIDDEDEEMDEQPENLSAREPSIRHYQQSLNYHNQSGTSPASSTASSGSLQTSFAGLLYPPVPTLQNPNHHQSHNAKLNNNENMMVDPARDPAVYSNLLPRPGSNDNSWESLIEITKTSETSKLQQLVDNIEHKLTDPNQCIICHRVLSCKSALQMHYRTHTGERPFKCKICGRAFTTKGNLKTHMGVHRAKPPLRVLHQCPVCHKKFTNTLVLQQHIRIHTGEPTDLSLEQIQAAEVNDFPPGYPPHHPLASFLPQGFPGLHSAPGGFPMGYPPTRHLSMEHHPSHEDMDIKDRITAHYNHQRYIDEQSEDMMDDQDDVDDENNEDDGIDEDDDERNQRHQHLLLLHHQRQQQQEQHLQQLQQLQQQQQQQQQQQQQRDNDIISHCDESRDKRELNDINDEDNEDNDDDIDNDDKKTERNDNKLISSMPINFSTSLAALENQVRTITTMATSASSVSSLDKYHCSEKSSSPVSSIIGTPLDLTPRASSSPGSIVSTSTPPPPPLLPQLPSSTAAATTTTTAATTTTTSAVAAASATNTQHQNPFGMFAGIIQAVSSSSSSASSTSSSSPNNIQTSSSTVGVGVNSSNSGTGDGNGNGSGTTGVGSSMNVINPATGGSGGGGALASLTTSAVLAATSTYNPLGLAVGGPAVRGNTTCNICYKTFACNSALEIHYRSHTKERPFKCTICDRGFSTK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -