Acol004256.2
Basic Information
- Insect
- Aphidius colemani
- Gene Symbol
- ZFX
- Assembly
- GCA_030523065.1
- Location
- JAPYYR010000829.1:22747-27802[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 15 0.37 31 5.2 0.1 3 23 15 35 14 35 0.95 2 15 3.4 2.9e+02 2.1 2.2 1 23 1102 1125 1102 1125 0.79 3 15 0.0085 0.71 10.3 0.7 2 23 1262 1284 1261 1284 0.94 4 15 0.0046 0.39 11.2 0.2 2 23 1297 1318 1296 1318 0.97 5 15 6.6e-05 0.0056 17.0 2.5 2 23 1321 1342 1320 1342 0.97 6 15 0.0018 0.15 12.5 0.3 1 23 1348 1370 1348 1370 0.97 7 15 2.6e-05 0.0022 18.3 4.5 2 23 1377 1398 1376 1399 0.95 8 15 0.12 9.7 6.8 3.7 5 23 1412 1430 1411 1430 0.97 9 15 0.0005 0.042 14.2 2.8 2 23 1436 1458 1435 1458 0.96 10 15 0.011 0.89 10.0 0.3 2 23 1474 1494 1473 1494 0.97 11 15 3.7e-05 0.0031 17.8 1.2 1 20 1500 1519 1500 1522 0.92 12 15 0.00081 0.068 13.6 2.1 1 23 1530 1552 1530 1552 0.99 13 15 0.0025 0.21 12.0 3.2 1 23 1558 1580 1558 1580 0.97 14 15 1.8e-05 0.0015 18.8 2.7 1 23 1586 1608 1586 1608 0.98 15 15 0.00032 0.027 14.8 7.2 1 23 1614 1636 1614 1637 0.96
Sequence Information
- Coding Sequence
- ATGGATCTCAATGCGACGTCGGATACCAGTGGGGCAGTTGCCTGTCCTGTCTGCACACTTTATCTTCGTGAGGGCATCAGCCTCCAAAGGCATCTCAATACTCATCCAAAAGAGCAAGTTATTGATGCACTTATTAAAGCTGCAAGTGGTACAAACACAAGTTCATTATCGTTATTATCATTGCCACCAAcatcaacaccaccaccacaatcatcatcatcaccaataacaacaacatcatcttcAACcccaacaataacaaatacaacaacagcatcagcatcatcaacaacattatcacaatcatcacaatcatcacaaataataacatcacATCAAATAAGTCCACAAATATTACCAACAACACCACAATcacatcctcatcatcatcataatcaatcACCACAAATAACTGGACAAGCAAATCACATTCCATCACAATCACCATATCCAATTGGACCTGTGTTTGAATATCCACCAGTAAATCCAATGATGTCACCACAATTTGCATCATTTAGTTATCaacaatttgttaataatggtTCAATGATGATACCACAATATGCCAtggcaccaccaccaccaccaccacaaccAAATCAAATGATGCAAATGCTATATAATCCATATAGTatgtatcaacaacaacaagtaccAGCTGTACAAGTGTTATCACCAGTAACACCATTACAACCACAactaccatcatcatcaacaacaacaacaaccacaacaacaacaacaacaacagcagcagcagcaacaacaacagtaatAGCTGCAGCAGCATCAGCAGCTACtagaataaaatcaattaatcttttaaatgataccacaataaatagaaataatccATTACCATCATTGTTACTatcatcaaaaacaaaagCAACGACAACGACAGCACCATCACCATCGACAATTtcatctataaataataatagtaatagtgaTGAACAAATATTACCAGAAatacatgatgatgattgtcaAGGTAATAATAGTGGtgctaatgataataatagcaatagaATATTAAATGTTACAAGTGATGAACCATCAAccataattgttgataatacatTGTTGTCTGTATCACAAAtaggacaaaaaataattagtgaaggagtaaaaacaaatataattgttgatgaaattaaacaaaatagtaGTGATAATGatcatgaaaaattagaaataagaGATAGatgtcaacaattaaaaacgaatgataatcaacaaattattgataacaatATCTCATCACAACAAAATAAACCAGAGAGTATTTTACCACATatagaagatgatgatgacgatgatgatgataatgacgataatcatcatgatgatgtcCTTGATaataacgatgatgatgatgatgatgatcttgAAGATAATACAGATCACAgaataaatgaattacaaCAATGTGAGGTAAatgtatatacaaataatgattgtcaaacaatgaataataaaaattctacaatACATGAAACAATGGCGGAAAATTTTGAACATAttactgataataatgaagacATACTTGAAGAGATTGTTGATACCGAAAAAGAGTATGATTATGAACAATTAGAACAAGAAAGATCAATTCCTAATTATTTTaagttaagaaaaaataataatatgaatttattaaaaaaaagaaaattaacaatacaaaatattagtaaaaatattagtattgaaaatataataaataatacaagtattataaaaacaacagataaaattatcaaactaaataaaataaatgatgactatgataataaaccaacaaattcaaaaaaaaattatacagtaatgaaaattaaaaaaatacatgatgaagttaattatgaattatgtgaaattgatgatgatatatttaattatacatatgTTCATAAAGGAAGTAATTCGAtgccatcatcaccatcaaagttagataataataaatttaaaaaatcgtaTTGTACTAAATCAGAGGGTGGCTCAAGTGATAATTTATATCCAGTTGAATTTGAATCAAGTACACTAATTgacgatgaagatgaagaaatggatgatgaagatgatgatcgAGACGCAGAaggtattgatgatgatgaagatgatgacgatgatgatgatgataaaggtattgttgataattttgatgaagaaGATGGAGAAATACCAACAACACAATCATATTCAAATAGAcgtaatattgataataataaaatatcaaataccCCATTAACAACAGccaataattcaaaaaatttacgtggacgtaaaaatttattaaaagataattatcatcaatccTCGTCGTCATCGTCAGCAATGACAAAAACAGCAGCAGTAATAAaaccaccatcatcaacaacaacaccacgaAGATCATTTGAACGTGTTACTTTTAAAACTTAtcacgatgatgatgatgatgaagctgATGAGGAAGAAgacgaagatgatgaagaaatgcgtatacaacaaaaaaatttacatagaaATTATCCTACTGGACGTAAAGTACCtacaataacatcaacaaataatattacaaataataaacaaaataatgataatgtttATCATCAATCAGTTATAACTGAACATGTTAGTTCATTTCCACAactaaatacaataaattcaaatcaagaacaatcatcatcaacaacaacaacaataacaacaacagcaacatcctcattgtcaattaataaaaatcatgatcCACTTGATTTATCTGATATAACAAATCCACCAATAACTAATGAAACAAAAGTTTTCcaatcaatgaataataaaataataaataatatgccAAATAGTGATCTTCTTAATATCAATGAAGATGCACATTCATGTCCATTATCAAATGTATTTGAATTTGATGGTTTACAAATATTAGTACCGAGTACATTTATAAGTGAATCATCACAAAAAGCAATAAGTGCAACAAGCCAACAATCAATGGCAAGTAGTGAAGGcggtggtggtgttggtattgatgaagaaattaaaagtGTTAACATGAGAGCTGATGAAACAATGCCACCAAGAGGTGAACTGTCAGAACAAGAAAGCAATGGTTGTACTGAACATTCAGCTTGGcagttATATGTTGGACAAGAGTCATCACGTATGTCAACATCTTATGATTTAATAGCACGTGAAAGTTGGGAAGAGTCAGAAGGTAGTGACAATGAGTCAGGTGTACCATTATTAGATAGTAGATCATTAGCTGGACATTTTACATCaagtttatttcttgatgGTGACCGTAAAATACCAACAAAACAACGTACATTTAAATGCTCACAAtgtaatgaaatatttgattgtCCAAAAGAACGTCGTGTACACAGTACAACTGTGCATAAAGAAGCTGGACCAAGTAACGGTAGTAGTAATTCTGGTATACTGGAAATGAGTGATAGCAAAGatattaaattacttgataGAAGAATGAATGCATTTGAGGATATATTTGTACCTGGTGGTGTTGATACAAGTCAAGATACAAATCAAGGACAACCATTATTACATCAAATGCAACCACCAcctcaacaacatcaacaacaacaacaatgttatcaacaacaacaacaacaatgttatcaacaacaacagcaacaacaactacaCCAACTTCAGTATCAACAGCTGCAGCAAccacaacagcaacaacattaTCCATTACAATcatcacaattattaattgttgataatactaaacatgaagaaaatgatgaaaaatcagaTATTATACCACAAATCGCTGAAATATCATGTGCCATGTGTAGTCAAAAATTTACATCTGAACGTTCATTACAAATACATAATAAACGTGTACATAATACTGAAGTAGCTAAACGCTTGcatgaaatatcaaaatgtCAAATATGTAATGAAGAATTTCCAACGGTTGTTACATTTAATGTACATTTAAAAGAACATCCACTTGAGTGTGCACAAtgtggtaaatattttttccgtaaacaaaattttaaactacATATGAAACGTCATTTAGGCATCAAGCCATTTCCTTGTACAGTATGTGATAAGGcatttttaacaaaacaaaaactgGATGAACATATGAATGGCCATACTGGTAACGAGCCagttaaatgtaatttatgtAATGAAACATTTAGAAGATACTCAAATTTAACACAACATAAAAATcgtcatcatttaaatattaaaaaaaaattaaaagatttcATATGCCATTGTGGTGAAGTATtccatacgaaaaaaaaattagcatggCATAAAGAAACACATGAAGAAAAACCAAAGTCATGTACATTTTGtagtgaaaaatttattcatatggCAAGTTTAACGAGACATATGAGACGTGCACATAACAAACGTTTCGTTCCTGATGCTGAACGGGACAATGAAAATGTCGAGTGTCCGATatgtaaatgtatttatttacgtTCATCGTTGGCTGTACATATGAGAGTACATAATGGTGAACGACCATACGAGTGTCAAGTATGTACAAAATCATTTAGCACCAAATGGAATTTACAATTACACAAATGGACTCATGCTGCACGTAGTACAAAACCATTTAAATGTAATCAATGCGCAGCAGCATTTTATCGCCATAATGATTTTACAGCACATATGAATTCTCATAAAAATGTTAGACCATATACATGCAATTATTGTGGTGCacaatttattagaaaatataattgtttaagaCACGTTAAGGAGCATGAGGAAAATAAGCAATATGCATGTGATGTTTGTAGTAAAACATTTCATCGTTcttattatttgaaagaacATTTGCGTATACATAGTGGTGCTCGTCCTTATACATGTCATATTTGTGGTAAATCCAGTAGCACCAAATCAAATCATAATAAGCACGTAAGAATTCATCATGCGAGAGAACCTATCAAtactgaaaattaa
- Protein Sequence
- MDLNATSDTSGAVACPVCTLYLREGISLQRHLNTHPKEQVIDALIKAASGTNTSSLSLLSLPPTSTPPPQSSSSPITTTSSSTPTITNTTTASASSTTLSQSSQSSQIITSHQISPQILPTTPQSHPHHHHNQSPQITGQANHIPSQSPYPIGPVFEYPPVNPMMSPQFASFSYQQFVNNGSMMIPQYAMAPPPPPPQPNQMMQMLYNPYSMYQQQQVPAVQVLSPVTPLQPQLPSSSTTTTTTTTTTTTAAAATTTVIAAAASAATRIKSINLLNDTTINRNNPLPSLLLSSKTKATTTTAPSPSTISSINNNSNSDEQILPEIHDDDCQGNNSGANDNNSNRILNVTSDEPSTIIVDNTLLSVSQIGQKIISEGVKTNIIVDEIKQNSSDNDHEKLEIRDRCQQLKTNDNQQIIDNNISSQQNKPESILPHIEDDDDDDDDNDDNHHDDVLDNNDDDDDDDLEDNTDHRINELQQCEVNVYTNNDCQTMNNKNSTIHETMAENFEHITDNNEDILEEIVDTEKEYDYEQLEQERSIPNYFKLRKNNNMNLLKKRKLTIQNISKNISIENIINNTSIIKTTDKIIKLNKINDDYDNKPTNSKKNYTVMKIKKIHDEVNYELCEIDDDIFNYTYVHKGSNSMPSSPSKLDNNKFKKSYCTKSEGGSSDNLYPVEFESSTLIDDEDEEMDDEDDDRDAEGIDDDEDDDDDDDDKGIVDNFDEEDGEIPTTQSYSNRRNIDNNKISNTPLTTANNSKNLRGRKNLLKDNYHQSSSSSSAMTKTAAVIKPPSSTTTPRRSFERVTFKTYHDDDDDEADEEEDEDDEEMRIQQKNLHRNYPTGRKVPTITSTNNITNNKQNNDNVYHQSVITEHVSSFPQLNTINSNQEQSSSTTTTITTTATSSLSINKNHDPLDLSDITNPPITNETKVFQSMNNKIINNMPNSDLLNINEDAHSCPLSNVFEFDGLQILVPSTFISESSQKAISATSQQSMASSEGGGGVGIDEEIKSVNMRADETMPPRGELSEQESNGCTEHSAWQLYVGQESSRMSTSYDLIARESWEESEGSDNESGVPLLDSRSLAGHFTSSLFLDGDRKIPTKQRTFKCSQCNEIFDCPKERRVHSTTVHKEAGPSNGSSNSGILEMSDSKDIKLLDRRMNAFEDIFVPGGVDTSQDTNQGQPLLHQMQPPPQQHQQQQQCYQQQQQQCYQQQQQQQLHQLQYQQLQQPQQQQHYPLQSSQLLIVDNTKHEENDEKSDIIPQIAEISCAMCSQKFTSERSLQIHNKRVHNTEVAKRLHEISKCQICNEEFPTVVTFNVHLKEHPLECAQCGKYFFRKQNFKLHMKRHLGIKPFPCTVCDKAFLTKQKLDEHMNGHTGNEPVKCNLCNETFRRYSNLTQHKNRHHLNIKKKLKDFICHCGEVFHTKKKLAWHKETHEEKPKSCTFCSEKFIHMASLTRHMRRAHNKRFVPDAERDNENVECPICKCIYLRSSLAVHMRVHNGERPYECQVCTKSFSTKWNLQLHKWTHAARSTKPFKCNQCAAAFYRHNDFTAHMNSHKNVRPYTCNYCGAQFIRKYNCLRHVKEHEENKQYACDVCSKTFHRSYYLKEHLRIHSGARPYTCHICGKSSSTKSNHNKHVRIHHAREPINTEN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00132783;
- 90% Identity
- -
- 80% Identity
- -