Acol003247.1
Basic Information
- Insect
- Aphidius colemani
- Gene Symbol
- -
- Assembly
- GCA_030523065.1
- Location
- JAPYYR010000570.1:7930-16524[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 29 8.1e-06 0.00068 19.8 0.8 1 23 217 239 217 239 0.98 2 29 0.0026 0.22 12.0 1.9 1 23 263 286 263 286 0.96 3 29 0.0024 0.2 12.1 0.8 2 23 293 315 292 315 0.96 4 29 0.00018 0.015 15.6 0.7 1 21 335 355 335 356 0.95 5 29 0.0019 0.16 12.4 0.2 1 23 476 499 476 499 0.92 6 29 0.00011 0.0095 16.2 0.1 1 23 568 591 568 591 0.96 7 29 0.0045 0.37 11.2 0.5 1 23 597 620 597 620 0.96 8 29 0.12 9.7 6.8 1.5 1 23 633 655 633 655 0.97 9 29 5.2e-05 0.0044 17.3 1.0 3 23 701 722 699 722 0.95 10 29 0.11 9.2 6.8 1.8 2 23 790 813 789 813 0.94 11 29 3 2.5e+02 2.3 0.0 2 23 822 844 822 844 0.84 12 29 0.074 6.2 7.4 0.1 2 23 851 873 850 873 0.95 13 29 1.3e-05 0.001 19.3 1.2 1 23 881 903 881 903 0.98 14 29 0.0051 0.43 11.0 0.7 2 23 960 983 959 983 0.91 15 29 4.1e-05 0.0034 17.7 2.3 1 23 986 1009 986 1009 0.97 16 29 0.0041 0.35 11.3 0.7 2 23 1016 1038 1015 1038 0.95 17 29 0.0031 0.26 11.7 5.1 1 21 1069 1089 1069 1090 0.95 18 29 0.0026 0.22 12.0 1.8 2 23 1104 1125 1103 1126 0.93 19 29 0.36 30 5.2 1.1 1 23 1129 1152 1129 1152 0.94 20 29 0.014 1.2 9.7 1.6 2 23 1159 1180 1158 1180 0.95 21 29 1.2 1e+02 3.5 0.2 2 23 1188 1210 1188 1210 0.95 22 29 3.5 2.9e+02 2.1 0.0 2 23 1217 1239 1216 1239 0.87 23 29 0.22 18 5.9 2.7 2 23 1248 1270 1248 1270 0.96 24 29 0.72 60 4.3 0.7 2 23 1276 1298 1276 1298 0.93 25 29 5.4 4.5e+02 1.5 0.6 1 23 1353 1376 1353 1376 0.93 26 29 0.00031 0.026 14.9 0.8 1 21 1399 1419 1399 1420 0.96 27 29 0.48 40 4.8 1.3 2 23 1547 1569 1546 1569 0.93 28 29 0.67 56 4.4 2.5 1 23 1609 1631 1609 1631 0.97 29 29 0.18 15 6.2 0.2 3 20 1640 1657 1640 1659 0.93
Sequence Information
- Coding Sequence
- ATGGATACCAGGGAAAAATACGATGAATTATGCAGGCTATGTGCCTCGTACGACGCcgttaaaatgaatatatttggCCAGGACGGAAAAAATCGACaattagttgataaaatacagaCTTGTCTTCCATTCAAGattAATGAAGATGATCGATTACCAAAATGTTTGTGCTACAGATGTATGTAcaatttggaaaatttttatgactttAGAACAGCATGTGTTAATGCTGTTTCATTACTTGAACGTAGTCTTCCATCTAATGATTTCAATAATGGAAGAAATGGTATAGATGTGGAAAAATGTTCTGAGCTACGTACAGAgcttttgaaagaaaaagaaaaaatgccAATATTAATACCAGAAGCACCAGTGGTAAATCCAAATGCTGCCCTAGGTACACCACCAAGATTAAATTCAGATGGTGAAGCAATACATGATTTAGAAATGGGACAATCAAGTACTGATGATGGTCAATATTATCTAGATGATAGTCATCATAACAATAAATCAGATGAATATGAAATggatattgaattaaatccATCTGATTTTCTTGATATGGTAACAGACATGGAATCGTCAAGCCAAATTGATCATCTATCATCACACGATGTGTTTAAACATACATCAGAACAACATGAAGTTTATGTATGTTCATTGTGTGATAAAGCATTTAGTTCAAAGGGACATTTATCTTTACATGCTAAAATTCATGTTGGTGCTGAAAATGATGTTGTAGGTGAAAAAGTCATTACTGATGATCATACATCATACAAACGACCATATCAATGTGATTTATGCAATAAATCATACTCAACAGCTAAACACAGATGGGGTCATGTATCAACAACACATCGTGGTCATCCAGCAGTAACTTGTCGTTTTTGTTCGCGTATTTATTCAACGAGAATTAATTTAGAAGAACATATTAAATCAAGACACACTGGTTTATCAGCACCACCTGAACCACCTGGACCATATATACAACAAGGTACACgttttcaatgtaaaaaatgtccaaaaatgtatacaaatataactgatttaaataaacacaGTCGTGTATGTATTGCTGGTGGTAATGAAcgtactaaaaataaaaataaaaataaattaccattaaAAGGTAAATGTTTAATGGATGCATCAGATGACATGTCAAGTAATGAATCAGATGATTATAGTCGTGAATATCGTAATGCTGAAgctaaattatctaaaaatccACAATTAACAATACTTAAACAAGCATTAacacgtaataataataataataataataataatataaatgatggtATTAATAAacgtataaaaattaaagacagaaaaaaattaatgattaaaaaagaaatgattgaTTCTGTtgatagtggtggtggtggttatTCAAAAgagtatgaaaaaatacaagaaaaaccATATATTTGTATTGTATGTAATAAagattttgttgttaaatcatcattaaGTAGACATATACTATCGTCACATGGTATTGATCCATCACCATacattgaaaatgataaatgtcttaaaaagttattattaacatcaacaacgccaacaacaaataataataataacattaaaagtGAACCATTAGATATTGATGCTATAAATCAAGATGacaatgatgaagaagaacatgaacaacaacaacagcatgaTGATAATCGTATTGAAATTGAAACAGTATTTGTTTGTGAAATATGTACACGTGATTTTAATGATCGTGCATCATTATGGTTACATATACGTGCAACACACAAAGAATATGCTGCATTTGCATGTggtgtttgtttaaaaatatgttcAGATAATGATCAATTATTGAATCATGTTAATATGTATCATGGTGgatcaaaattattagtatCTGAACAAAGACGTTATAGTTGTACAATATGTGGTAGACAACATGattctagaaaaaaattaataacacatGTGTCAATACATAATATTGATTCGTCATATGATCCAGCTAATTTTGTACAgcttaattcaaattattacaGTGATAATGTACCAATTATAAATGATGGACAAGAACAATGGACTGATTTTGATGCTGAAGATGGTGAAAAAGTAAATTGTTATGTTTGTTTTAAATCATTTCCAAATGAAGATCATTTAATACGTCATCAACGTAATGCACATAAAACagatcaattaataaatgatacaacaactgcattattaacaacaacaacaacaacagcagcaacaacaccaacaacaaatgGTACAAaaggaaattataatttgttttatgtttGTGAATTATGTGGTAGTTCACATCCAAGTAAATGGGAACGTTGGCTACATGTATCAAATACTCATTATGATGatacaacaattaaatgtGAACGTACTGATTGtgctaaaatattttcaacaaaatcattaaaaaatgatcatGTACAACATCATGCGATGCAAGGAGCATCACCAAATACCTGTGAAATATGTGGAAAATTATGGGGAAGTAGAGTTGATTATTGGAAGCATGTTATGGGTGTTCATGCTGATACAGTACCATTAATATGTGGTGTTTGTTTGAAAGTATTTCCTGATGTTTATCGACTTAGTTTACATGTTAGAAAAAATCATTGGCCATTGACAAATGGTGATTTTAGTTGTGATATTTGTGGTCGTccatattcaaataaatcaaaaatgtCACGTCACAGAAAAATACATGgaattgttgataatgatttaatgatgatgaaaacaacaacagcaacaacaacaactacaaatGGAATGTcgttattaaatcaaataaataacgatgatgatgatgatgataatgatgatgatgacgataataatattacaaatgataatatacaaaattataatttaacatgTGAAATATGTGCagataaaagttttataaattggGATGATTTATGTAATCATCGTAGATTAACACATGGCTTGTTTCCATGTGATTTGTGTAATAAATGTTACGGTAGAGCATCACATTTATGGAAACATGTTAATAGAGTACACAAAGGACACAGTGATGTAACATGTCGTTATTGTTTGAAAACAAGTGCATCAAAAGATCATCTGGCTGCTCATATTGCTAAAACACATCGTTATGAACCAgatgaaaaacaacaatttattaataattatattaataattcaccaagtggtggtggtggtgatgacgATAATGTTATTCATCATTgtgaaaaatgtaataaaggTTTTCataaaagatatttattaCGTAGACATATGAAAGGCTGTCAAAATTATCGTAAAGATCCTGGTGCATTATTAACACGATGTCGTGCATGTGAAAGAATATTTAAAGATCGTGCAAGTTTACAAAAACACATTGAAAATCATCATAGTAGTTATACATGTCATTTATGCAATGAAACAATAACATCAAAACTTGGTATTATGACACACAATAGAATTAACCATATGAATCATGATGATTTAACATGTACatcatgtaaaaaattatttagaacaAAAGAAGATCTTGATGTCCATAAAAAAGATCATAAATATCAAAGTTCATTAAATGTTTGTGATTTTTGTGGTGACACTGTTGAGagtaaattaaaactaaaaatgcaTATACTTAGTTTACATAGAAATGAAATTGGTGTATCATGTGGTGTATGTTTAATTCCAATGAAAGATCCaaaggatttaaaaaaacatgttgaAGATGAACATCCTGGTATATTATCAAGACCAAATACATGCCAAGTATGTGGTAAACAATATGCATCAAAATGGAAAGCATTTGATCATACTAAAAAATGTCATGGTAAAGTATTTAGAACATGTAAACAATGTTTAGCTGTATTTAcaagtgatgatgatattagACATCACTATGAGTACATTCACAATGTAACTAAAGAACAACTTGCTAGTATTGAAAGTAGTTATGATGTTTCATCTAAAAATGATGATCAATCAATTGACATTGATTACATGGATTATTATGACGATGACAGTGCATTATTATACAACAATAGTTTTTCATCAAAACGTAAAAGATCTGTTTCACATGAGTGTGATATTTGCTATGATCTATTTGCAAATGATGAcgaattttatcaacattatcgTGATGTACATAATAAAGATCCAGATaagatgtttaaaaaaaataaatcaaagaaaaaatctaAAAGTCGTGATAACTATGAATGTAAAAGTTGTACAAAACAATTTAGTACAAGGTCATTGTATTGGAatcacataaaaatatgtacaaaTAACTATTTAAAAGATGATTTAGAAAGTGGCAATTCAATGTCAATACTTGAATCacatcttaaaaataataatcaattaaaaattcaacaacaacaacaacaacaacaatatgataataataatgatgatatttctgatgcagcagcagcagcagcagctgctgttgatgatgataataatgatgccATTAACGACATGAGTTTAAATATAccagattttaatttatttgaagataTTAATATGCAATTATCTGGACAAAAACCTTTGCCACCATTGATGCCACTTGCAGCAGTGAAAACTCCTCAGTCAACAAAATGTTATCGTAAAGATTCAAGAAAAGTTTATGATGAATCAACAAATACTGTATGTGCTTGTGAAGTTTGTGGTAAACAATGGCCagctaaaaaacatttatggcAACATTTAATTAGATTTCATCGTGCTGAAGCTGCTGTAACATGTGgtgtttgtttaaaattatgtaaaacatattttgatttatcatgtCATTTGAAAGAAGCACACGAAGCAATTTTAAGCTGTGaaggaaataattttacatgtaaAACTTGTGGTAGATATCACAATGCAAGAAGTAAGTTATTACTTCATATGagtattcatataaataataatgaacatgTTTGGTGTGTAAAATGTTCTGTTAGTTTTgaaaatcaagataaattaaatgaacatGCCAGTAGTTGTATTGTTAAACGTCGTGAAGAAGCTGATGTTGGGGAccaaaaaatagaagaaaataatattaaacatgaaaataaagaacaagaagaaaaacaaattaaaaaacaggAAGAGCAAGaggaacaacaacaacaacaacagcaacaaaaaCAACCAAAACAAGAAGAACAAGAAGAGGAAGAAGAATATGATGATAAAGGTAGTTTAATTGGTGATGGTGCTTCATTGATGGGAGATGTTGGTGAAGAAGCTGATTTTGAAAGTGAACATGAAGCATCTGATAATGCTGAAAATAATACTGAACAAAGTGAACATTCACAACACTCTGAAGACTCTGATagcagtagtagtagtagtaataataatagtagtgtTGCAGCATCAGCCAGTGAAGATGAAGGAGAAGAAGCCGAGGCCAATGCCAAAGATTCATCAAAATGCTCTGATTCTATTATTAAAGAGCATGAAAgtcatgatgataaatcaaatatttcaaatgatattaaaccattaaaaaataatgagtcATCAACaagtcaagaaaataaaaatgatgaaaaattattaaacactgTTGATGTAATTGAGcctattaatattaaatgtgaaaaaaattttattaatgaagaGAAAACATTTATGTCAAGTGAATCTTCTTCCAAgccagatgataataatgatgataaaataaaacaaaatgaagaTACAGAAGAGGAAGAAGAtgcagaagaagaagaagaagaagaagaagaagagttGGCATCTGACTtggaaaataatgaaactgtCACACAAGATGAAcaaaatgatgaagaagaagaagaagaagatgatccagtagaagaagaacaagaagaagaagaagcagaagaagaagaagaagaagaaaatgaagaagaCGATGAAGAGCAGgaggaagaagaagaaatataTCCAGAAAGACATCATGAAAATTTAGAAGACATAAAAGATATGGATTATGAACAATCATCTCCTGATAAATCACACGATGAAATTGAATCTGATGATGAAGACAATGAAGAAGATGGTACGTTTGTAACTGAGCATGAAAATGAAATGCAAATTGAAAATCTTGATGGTACTGTATTAATGGTtgcaaatgatgatgatggaaatcaaatattaatagaaaGAAACGTTGACGAAATTGATactgatgataatgaattgGGTGATGCCTCTggttatatttatcaacaagatAATGTTGagtatgatgataattatactgataataatgacagtcaagatgttgatgaaaataatgaaaatgagatGGAAATACAGAGTGAAGCtgatgataatgttaattGTGGTGAAGAAagtgaagatgaagatgaggatgatgataattCGAGTGCCAAAAACAGTGTGTCAAGGacgtag
- Protein Sequence
- MDTREKYDELCRLCASYDAVKMNIFGQDGKNRQLVDKIQTCLPFKINEDDRLPKCLCYRCMYNLENFYDFRTACVNAVSLLERSLPSNDFNNGRNGIDVEKCSELRTELLKEKEKMPILIPEAPVVNPNAALGTPPRLNSDGEAIHDLEMGQSSTDDGQYYLDDSHHNNKSDEYEMDIELNPSDFLDMVTDMESSSQIDHLSSHDVFKHTSEQHEVYVCSLCDKAFSSKGHLSLHAKIHVGAENDVVGEKVITDDHTSYKRPYQCDLCNKSYSTAKHRWGHVSTTHRGHPAVTCRFCSRIYSTRINLEEHIKSRHTGLSAPPEPPGPYIQQGTRFQCKKCPKMYTNITDLNKHSRVCIAGGNERTKNKNKNKLPLKGKCLMDASDDMSSNESDDYSREYRNAEAKLSKNPQLTILKQALTRNNNNNNNNNINDGINKRIKIKDRKKLMIKKEMIDSVDSGGGGYSKEYEKIQEKPYICIVCNKDFVVKSSLSRHILSSHGIDPSPYIENDKCLKKLLLTSTTPTTNNNNNIKSEPLDIDAINQDDNDEEEHEQQQQHDDNRIEIETVFVCEICTRDFNDRASLWLHIRATHKEYAAFACGVCLKICSDNDQLLNHVNMYHGGSKLLVSEQRRYSCTICGRQHDSRKKLITHVSIHNIDSSYDPANFVQLNSNYYSDNVPIINDGQEQWTDFDAEDGEKVNCYVCFKSFPNEDHLIRHQRNAHKTDQLINDTTTALLTTTTTTAATTPTTNGTKGNYNLFYVCELCGSSHPSKWERWLHVSNTHYDDTTIKCERTDCAKIFSTKSLKNDHVQHHAMQGASPNTCEICGKLWGSRVDYWKHVMGVHADTVPLICGVCLKVFPDVYRLSLHVRKNHWPLTNGDFSCDICGRPYSNKSKMSRHRKIHGIVDNDLMMMKTTTATTTTTNGMSLLNQINNDDDDDDNDDDDDNNITNDNIQNYNLTCEICADKSFINWDDLCNHRRLTHGLFPCDLCNKCYGRASHLWKHVNRVHKGHSDVTCRYCLKTSASKDHLAAHIAKTHRYEPDEKQQFINNYINNSPSGGGGDDDNVIHHCEKCNKGFHKRYLLRRHMKGCQNYRKDPGALLTRCRACERIFKDRASLQKHIENHHSSYTCHLCNETITSKLGIMTHNRINHMNHDDLTCTSCKKLFRTKEDLDVHKKDHKYQSSLNVCDFCGDTVESKLKLKMHILSLHRNEIGVSCGVCLIPMKDPKDLKKHVEDEHPGILSRPNTCQVCGKQYASKWKAFDHTKKCHGKVFRTCKQCLAVFTSDDDIRHHYEYIHNVTKEQLASIESSYDVSSKNDDQSIDIDYMDYYDDDSALLYNNSFSSKRKRSVSHECDICYDLFANDDEFYQHYRDVHNKDPDKMFKKNKSKKKSKSRDNYECKSCTKQFSTRSLYWNHIKICTNNYLKDDLESGNSMSILESHLKNNNQLKIQQQQQQQQYDNNNDDISDAAAAAAAAVDDDNNDAINDMSLNIPDFNLFEDINMQLSGQKPLPPLMPLAAVKTPQSTKCYRKDSRKVYDESTNTVCACEVCGKQWPAKKHLWQHLIRFHRAEAAVTCGVCLKLCKTYFDLSCHLKEAHEAILSCEGNNFTCKTCGRYHNARSKLLLHMSIHINNNEHVWCVKCSVSFENQDKLNEHASSCIVKRREEADVGDQKIEENNIKHENKEQEEKQIKKQEEQEEQQQQQQQQKQPKQEEQEEEEEYDDKGSLIGDGASLMGDVGEEADFESEHEASDNAENNTEQSEHSQHSEDSDSSSSSSNNNSSVAASASEDEGEEAEANAKDSSKCSDSIIKEHESHDDKSNISNDIKPLKNNESSTSQENKNDEKLLNTVDVIEPINIKCEKNFINEEKTFMSSESSSKPDDNNDDKIKQNEDTEEEEDAEEEEEEEEEELASDLENNETVTQDEQNDEEEEEEDDPVEEEQEEEEAEEEEEEENEEDDEEQEEEEEIYPERHHENLEDIKDMDYEQSSPDKSHDEIESDDEDNEEDGTFVTEHENEMQIENLDGTVLMVANDDDGNQILIERNVDEIDTDDNELGDASGYIYQQDNVEYDDNYTDNNDSQDVDENNENEMEIQSEADDNVNCGEESEDEDEDDDNSSAKNSVSRT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00132142;
- 90% Identity
- -
- 80% Identity
- -