Basic Information

Gene Symbol
Mblk-1
Assembly
GCA_030523065.1
Location
JAPYYR010004118.1:1-3470[+]

Transcription Factor Domain

TF Family
HTH
Domain
HTH_psq domain
PFAM
PF05225
TF Group
Helix-turn-helix
Description
This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 5.4e-19 9e-16 57.2 0.0 1 43 213 256 213 258 0.95

Sequence Information

Coding Sequence
CTTGAGTCACAAGAGCACAAGATTCCTGAAATAATGAGACGGCTTATGAGTGAAGATATCAACGAAGATCAATTGCGTACAAAATTCTATCTTCATTCATCGCAACAACAAAAGCAACAGTCATCTCAACAATTACCAATGTCAACTGATGATTTCATTCCAAGTAATGAAGATGAAGCGAGTGACAGTGGTCAAAGCAGAGCGATATTGAAAATTCCGTCCTACAAGCCAGCAAATCCACCGGGcttgaacaaaaataatggAGAAACAAATTCTGGAGCATTCGCTTTACCCCCAAGTACAGCAACAAGCCCAGGTCTTCTTGAATGCGCTAGCCCCACATTTTCCGGTGCAAGTAGTCCAACAAATTCGTTAGCTGGGAAATCAGTGAGCGTAAATTTCCGTGATGTTATTGCAAAAAGTATAAGCTCCAAGTTTCAAGAAGGACAGTCTTCAAACCGACAAAACTGTCCATCAATGCTTATTGATTCAAATCCCTTCAAACGAGGTAGGTACACCCCACCAGAACACAATCAGGGACAACAGCAAAAGCCGCAAAACAGCCAAGAAAGTAAATCAAAATCTAGCTCTAGTGGTAAAGGAACGAGACCTAAACGTGGAAAATATCGTAATTATGATCGTGATAGCCTAGTTGAGGCTGTTCGTGCAGTCCAAAGAGGAGAAATGAGTGTTCATCGAGCAGGTAGTTATTACGGTGTGCCTCATTCCACCCTTGAGTATAAGGTCAAAGAGAGACATCTCATGCGACCCCGAAAAAGaGACCAGAAACAAGCTGATGACAAGACAAAAGAATCATCGACGTCGAGCTCAACAATCCGGCCGAATCTTCAAGATAAAAAGTCAACGATGAAGACACAAAAGCCTTTCAATCCCAGTCCTGGAAATATTTCTGGTTCGAACGGTATGAAAATACCATTTTTAGATGGTGTACCACATCTCCCCTTTggccattttaatttttggggGCCAACACCTTTCATGCCTTCACCATTTATAGGAGGAGCACCAAATGTTTCTACAATACTCCCTGAGCAGTACTTTGCCACGCAACGAATGCGAGGCCTCCAGGAACAGCAAAGATCAGCAATTGCTCAACAGcaacaaataacaattgataacAGAGAAAAAGTTGGAATAGAGCCTTCTAATCCTCGATCAATAGTGAAAACAACCCGTGAAATGACTGAAAGTCTTTATGAAGGTACTGGTGTGAATGGTagttttcttgataatttgatCAGATCAAGTCTGGAAACAGGGAAATCAAGAGAGCGAGGGTTGGCAAACAATGAAGTTACCCAAACTCACCTAAATACTGCTGGTGGCAAAGTAGTGGATCAGCTTTGTGAAATCTCACAAAAAGTGCCCGAATCAAAAATAACTCAGAACTGTAGTGATGATGAGAGCTACTTTAATGCACTCTCAGAACGAACAGAAAAGGTACCAATTGTTGATCTCAGTCCATCTCTTACAGATCAAACCGGAAATGATAATCATCCAAATGACAATTTAACAACGACGTCGACACTACACTCTTTCAGTCAATTTGATTGTCACGATGATGAACACGAAATACAAGTAGATCAGTTAACCAAGGAACGTGATATTCAGAACAGTAATGATGCAATTATTCAACCACAATTTAATGTTCAGTCCGATTTACACAATATTTATACCCTGTCGAGTGAGAAAAAAAGTGCCTGTGATAATAAACTTATAATAGATCATTCGAGCCCTAGAAGCCCGCTAGCATCACAACAACAGAATACCGATAGAAATAAAGAGTTTCCGGGCACTGGTGTTTTAGACATTGAACCTCAAAGAGATTACTCTACTACAAATAACAGATCGATTGACCAAGTTCAAGAGAGTAATACAATGATCGTTCAGATTTCTCAAGAGCCATGTAGTACTCTTGCTATAAAAGACAATTTAGAACATTATACCGAGAATTAG
Protein Sequence
LESQEHKIPEIMRRLMSEDINEDQLRTKFYLHSSQQQKQQSSQQLPMSTDDFIPSNEDEASDSGQSRAILKIPSYKPANPPGLNKNNGETNSGAFALPPSTATSPGLLECASPTFSGASSPTNSLAGKSVSVNFRDVIAKSISSKFQEGQSSNRQNCPSMLIDSNPFKRGRYTPPEHNQGQQQKPQNSQESKSKSSSSGKGTRPKRGKYRNYDRDSLVEAVRAVQRGEMSVHRAGSYYGVPHSTLEYKVKERHLMRPRKRDQKQADDKTKESSTSSSTIRPNLQDKKSTMKTQKPFNPSPGNISGSNGMKIPFLDGVPHLPFGHFNFWGPTPFMPSPFIGGAPNVSTILPEQYFATQRMRGLQEQQRSAIAQQQQITIDNREKVGIEPSNPRSIVKTTREMTESLYEGTGVNGSFLDNLIRSSLETGKSRERGLANNEVTQTHLNTAGGKVVDQLCEISQKVPESKITQNCSDDESYFNALSERTEKVPIVDLSPSLTDQTGNDNHPNDNLTTTSTLHSFSQFDCHDDEHEIQVDQLTKERDIQNSNDAIIQPQFNVQSDLHNIYTLSSEKKSACDNKLIIDHSSPRSPLASQQQNTDRNKEFPGTGVLDIEPQRDYSTTNNRSIDQVQESNTMIVQISQEPCSTLAIKDNLEHYTEN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00131876;
90% Identity
-
80% Identity
-