Acol005759.1
Basic Information
- Insect
- Aphidius colemani
- Gene Symbol
- -
- Assembly
- GCA_030523065.1
- Location
- JAPYYR010001234.1:13157-15063[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 2.1e-07 0.00034 20.1 0.0 2 38 237 273 236 279 0.87 2 4 3.7e-08 6.1e-05 22.5 0.0 4 39 289 323 286 327 0.91 3 4 0.22 3.6e+02 0.9 0.0 25 34 361 370 344 375 0.84 4 4 2.3e-13 3.9e-10 39.2 0.0 4 38 401 435 399 440 0.95
Sequence Information
- Coding Sequence
- ATGGCTACACCCGAAAatcaacaaccacaacaacaacaacaacaacaagaaaacATAGATAATTGTTATTTGGTAAAATGGCCTGATCATAATGATTATATGTTATCAGTGGCATCACAATTGttcaaagaaaattcaatggTTGATGTAACACTGGTTGTTGATGGTGAACATATTTATGCACATCGTATTGTACTTTGTTCATGTAGTACATTATTTCGAGAATTATTAAGTGATGCTAAAGATGATAatccaacaataataatatgtggTATCAGTGCTCATGATGTCAGGCTTATAATTGATTGGTGTTATTCTGGAAAACTTCCAAGTGATCTTAAAAGTTTTCAAGAagctgtatttttatttcaacttgatCTCTCAATTAGActtgatgaaattgatgatgatgatgttgttgctgATACCACAACGTCTATTACAAAGGATATATCTGATGATTCTCAAGAAGCATTGGCTGAATTTATACCATCAGATAATGAAGAAATATTAGATGAAACATTTAATATACATAGTGagattaatgataataatgataataatgataataatgatactgataattataatgaaataaatgataatgaacaAGAGCATGAAGATGTAACAAatgaaatacaattaaatagtGATAcagtcaataataataaaaaacgtaGAAAAGAGCATATAAAACGTGATTACAGTGAAGAAATGTTAGAATCAGCattgaatgatttaaaaaatggtaTATCATTAGTTGAAGCATCAACTAAAAATAGTATACCTCGTTCAACATTATATATGCGTGCTAAAACAATGCACATACCATTGAATGCATCAAGGAATGAATATTCAGCAGAATGTATGAATGGTGCAATATCAGCTGTATTAAAAGGTTCATCATTACAAAATGCATCTGATACATTTAGAATACCAAAAACAGTATTATGGAGAAGAATACGAAAAGATGGTTATCATATTATTAGAACTGATTATAAAAAACCATATGCttcagaaaaaagaaaagctgCTATTAAAGCATTAGAAAGAggtgaaaatttaacaaaagtatcacttgaatttaaaataccaaaaacAACATTATTTAGAGATAAAGCAAGACTTATTGATCAAGGAAAATTACCAAGTTCATATTGGAAAAAAAGACAAACAGCTAATGAAGCATATAAAAAATCTCGACTTGAAGAAGCTGTTTTTGCAtgtacaaatgataaattatcacaagCTGCTGCTTCAATAAAATATGGTATaccaaaaacaacaatatggAGAAGATTacaacattttaataaaaataaaaaaaaaaatcaacaaaatatcgaCAATaagaataacaataataataataaacaaactgaaaatgaaattattgttataaatgaaataactaATGATGGAAATGATTATTCAATGTGCGGTacttCTTCTGATATTTCTATTGCTTATATTGATGATACTGAAATTCCTCAAAATGCAATTATTCTAGAAGATGTTGATCATATTGATGAGGCTCATGATGAAGAATTTACTTCTATAATTACTCTTGATGACTGA
- Protein Sequence
- MATPENQQPQQQQQQQENIDNCYLVKWPDHNDYMLSVASQLFKENSMVDVTLVVDGEHIYAHRIVLCSCSTLFRELLSDAKDDNPTIIICGISAHDVRLIIDWCYSGKLPSDLKSFQEAVFLFQLDLSIRLDEIDDDDVVADTTTSITKDISDDSQEALAEFIPSDNEEILDETFNIHSEINDNNDNNDNNDTDNYNEINDNEQEHEDVTNEIQLNSDTVNNNKKRRKEHIKRDYSEEMLESALNDLKNGISLVEASTKNSIPRSTLYMRAKTMHIPLNASRNEYSAECMNGAISAVLKGSSLQNASDTFRIPKTVLWRRIRKDGYHIIRTDYKKPYASEKRKAAIKALERGENLTKVSLEFKIPKTTLFRDKARLIDQGKLPSSYWKKRQTANEAYKKSRLEEAVFACTNDKLSQAAASIKYGIPKTTIWRRLQHFNKNKKKNQQNIDNKNNNNNNKQTENEIIVINEITNDGNDYSMCGTSSDISIAYIDDTEIPQNAIILEDVDHIDEAHDEEFTSIITLDD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00131432;
- 90% Identity
- iTF_00131432;
- 80% Identity
- iTF_00131432;