Basic Information

Gene Symbol
ct
Assembly
GCA_030523065.1
Location
JAPYYR010000712.1:1-43903[-]

Transcription Factor Domain

TF Family
CUT
Domain
Homeobox|CUT
PFAM
PF02376
TF Group
Helix-turn-helix
Description
The CUT domain is a DNA-binding motif which can bind independently or in cooperation with the homeodomain, often found downstream of the CUT domain. Multiple copies of the CUT domain can exist in one protein (eg Swiss:P10180).
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 1.3e-27 4.4e-24 84.2 0.0 2 72 688 759 687 764 0.95
2 3 2.9e-32 9.7e-29 99.1 0.0 3 77 1096 1171 1094 1173 0.96
3 3 1.3e-30 4.4e-27 93.8 0.0 3 75 1344 1417 1342 1421 0.95

Sequence Information

Coding Sequence
aATTTTGAAGCCGTCAAAGTGGCTTCTTCACTGGGTCTCCAGGGGCCATCAGCGCCAATTGGTGCCCAATTATTGGCTTCTGGTGGTGGTTCTGATGATGCGACCACCGCAACATACCACGGAAATTTGGTAACCGGCAACAATAGCTCGGTGACAGCAGCATTGCAACAGCCAATACTTAATTCATTAAACTCACTTGCCACAATGCAAGCATCAGCTGAAGCAAATTCACTCGATTTACAAGCAATGCAATCCATGGATTGGCTTTTCAAGAAAGAAAGGATTTATCTTCTTGCTCAATTTTGGCAACAGaGAGCAACATTAGCTGAAAAAGAAGTAACAAcacttaaagaaaaattagcaGCGTCAACCGACGGTAATATCAAGACTGAGGGACAACAACAAACATCCCAAAATGCTCAAAGCACAGAAACAAGTCATGAACATAGTAATCCAAGAAGATCACCAAGTATTAATTTGGAACAAGAACTTCAGGCCAAAGACAAAGAGataAATCAACTCGTTGATGAAGTCACAAGGTTACAACAGAGTCTTCATAGACTACAAGAAACAAGTGCACAAACAGCATCAAGACTTGAAGAGGAATTAGAAACAAGAAGACAACATATTGTAAGGCTAGAAAGTAAATTAGATCGACAACGTGATTATGATGATATCAAACGAGAAATAAGTGTACTGAGATCAGTTGATTTATCACAAATACCAACTGGTGAACCTGGCAAAAGTTTGGAACATCTTCTTATGGAAAGAACAAAAGCTTTACAACAAGcagaaaatttaaaaccaccaacaacaccagATACAATTATTGGTGGACTTGCTTCACCACTGCAGCGTACTGCAACCGCCTCACCACATGGTAGTAGCAGTGTTGTTGTCAGTGGAAGTAATCCCACTTCCCTAACGTCCCAACAGGTGCTCCCAACGCGTTCCACCCCAACACCCTCATCGGTCACCTCAACTTCTACCACCACTACCACAACAACTAATCTCCTATTTCCACCTCCTTTACAAAATGTTGAAACTTTTGGCTCATTTCTTGGTGAAGAAATTGTTGCAAATTGGAGAAGATCCTTGGAAAgatcaattataaatcaacaacaacaacaacaatcacaaTGTACTTCtacaaattcaataaaatcacCAATCCAACAATCCCAAAAATTCCAGCAGAGTTCACAACTACCACCATTATCACCAACATCACCACAACTACCATTACTACCCCCATTAAGCCAAACGGGACTACACCAGCAATACACAAGTTTATATTCATTGCCAACAACACCGAACCTAAATCAACTTCAATCACCAACAGATCAAATTAATTCATCTGCAAGTACACCAGTTAAATCAACAACACCATTGGACAATCTTGATGATATGGATAAAATGCCAATAACAGATACCAGTATtgaattaacaacaacaaccacaacaacaacatcatcaacagtatcaacaacaacatcaacatcaattgCACAATCAATAACATCACCAATGTCAACATCagcaacaactacaacaacaacatcaacactTGGACAATTATCATTGACAAGCAGTCATCAATTATCAACAAGTAACGTTGAGGCAAATAATCTTCTGAATGGTACATCATTATCACTTGCTGGTTTACATTTAGTTggaccaacaacaacaacaatagcaTCACCAAAAAGTCCACATGATGATACattatacaacaacaacaataataataataacatcaacaataacaacattaataataataacaacaacagcattAGCCATCATCTCATgatgaacaataataatagtaatcacagtataaataataacaataataacaacagtaTTGGAAGTATAAGTGTATTGGACAGTTTAAAAGGTCCATTCAGATTTGATGATAGAACACATCCATTTAGATTTGGTGATGAATTTGGTGCTGCTGGTATGGCAGGTAGATTAGGAGAATCATTAATACCAAAAGGTGATCCAATGGAAGCACGTTTACAAGAAATGTTACGTTATAATATGGATAAATATGCATCACAAAATTTAGATACACTTCATATTGCAAGACGTGTAcgtgaattattatcaattcatAATATTGGACAACGTTTATTTGCAAAATATGTACTTGGATTGAGTCAAGGTACTGTTAGTGAATTATTAAGTAAACCAAAACCTTGGGATAAACTTACGGAAAAAGGACGTGACAGCTATAGAAAGATGCATGGATGGGCTTGTGACGAGAATGCTGTGATGCTACTTAAATCATTAATACCAAAGAAAGATTATGTTTCAGGCAAAGAACAAGGAATGCCAACATTTGCTCGTGGTCCACAGGATGGTGGTCCAAATGATATGAATGACGAAAGAATAGCACATATGTTAAATGAATCAAGTCATCTTGGAATGAGCCGTAGTGAACATGATATGTCAAATGATGCTGATAGTAAAAGTCCAAGTAGATTGGGTTGTCCAAGTCCATTATTTGGTAAAGACAGATATGACAGTCAAAATAGAagacttaaaaaatatgaaaatgatgaCATTCCACAGGAAAAAGTTGTTAGAATTTATCAAGAAGAACTTGCTAAATTAATGGGTAGAAGAGTTGAAGATTTACGAGGACCAAGAGATTTTCCAccaagTGCGATgttttcacattttttcaGTGCTGGTGGTGGTCAAAGTATACAAGGAATGGAAAGAACACAAGATGAAATAAGAATTGCACTTGATGCATATCATCGTGagttacaaaaattaaattcagcaCCTGGACAAATTCCAGGTTTACCAAATTTACCTGGTTTATTAGCACTTCATCAACAAGCACTACATCAAAATCATATTGCAAATGGTGGAGGAGGAGTACAAGATCTTAGTTTGGGAAAAATtgaacaaagaaataaaataatgaatggtATATCAGaagaagataaagaaaaaatggaaGAAGCCATGAGACATGCTGGTAGTGCATTTTCATTAGTAAGACCAAAACAAGAACCAACACAAGGTCCACAATCAACACCAGGTGGTTCAAGTGCAAGTTCACCACTTGGAAATTCAATTCTTCCACCAGCCATGACACCAAATGAAGAATTTTCAGCAGCAGCTGCTGCAAGTCCATTACAACGAATGGCATCAATAACAAATAGTTTAATAAGTCAACCATCAACACCAACACATCATTCATCAAATCAAAGACCATTAAAAGCTGTATTACCACCAATAACCCAACAACAATTCGATCTTTACAATAATCTTAATACAGAGGACATTGTGAAGAGGGTAAAGGAACAATTATCACAGTATTCTATATCACAAAGACTATTTGGAGAATCTGTATTGGGCTTATCACAGGGTTCAGTATCAGATTTACTAGCGCGACCAAAACCTTGGCATATGCTTACTCAAAAAGGCAGAGAACCATTTATAagaatgaaaatgtttttagaGGATGAACAAGCTGTTCATAAATTAGTTGCAAGCCAATATAAGATTGCGCCAGAGAAGCTCATGAGGACCGGCGGCTACGGCGGCCTGCCTCGTAAGTTTAACTCagcATGTGGAACACCAATGAAACCAATGCCACCAACAAAATTAGTACAAGAACAATTACAAAATGCAGCAAAAGCACAAGCAGCAGCAcaagcagcagcagcagcacaAGTTGCTGCACAAACGGCAGCAGCAGTACAACATCATCAAGAACAAGCACAAATGCAACTTGGCCCACCACAGTCAAGCCCACAACTTGGTCAACATTCAATACAAGGACCACAAGGATTAATGTTAACATCACCAGGTTCCCATCTTGCATCACATTTACCAACACAATTAACAATTcaagaattacaaaaaaaacaacatcaacaacaacaacgtgaacaacaacaacaaatgtcTGGTTTACATTCACCACATCAAATGACACCATCACCATTACGTAGTCTTCATCCACATATATCACCAAGTGTTTATGAAATGGCTGCATTAACACAAGATCTTGATAcacaaacaataacaacaaaaataaaagaagcaCTACTTGCTAATAATATTGGACAAAAGATATTTGGTGAAGCTGTACTTGGTTTATCACAAGGTTCCGTTAGTGAATTATTGAGTAAACCAAAACCATGGCATATGTTGAGTATTAAAGGACGCGAGCCATTTATAAGAATGCAATTATGGCTATCAGATGCACATAATGTTGATCGTTTACaagcattaaaaaatgaaagacgTGAAGCTAATAAAAGACGTCGTAGTAGTGGTCCGGGTCATGATAATTCATCAGATACATCAAGTAATGATACTGCTGATTTTTATCATGCCAGTAATTCACCTGGTCCAGGACCTGGTCCTGGTCCAGCAGCCAAAAAACAACGTGTATTATTTTCTGAAGAACAAAAAGAAGCATTAAGACTTGCATTTGCACTTGATCCATATCCAAATGTTGCAACAATTGAATTTCTTGCTG
Protein Sequence
NFEAVKVASSLGLQGPSAPIGAQLLASGGGSDDATTATYHGNLVTGNNSSVTAALQQPILNSLNSLATMQASAEANSLDLQAMQSMDWLFKKERIYLLAQFWQQRATLAEKEVTTLKEKLAASTDGNIKTEGQQQTSQNAQSTETSHEHSNPRRSPSINLEQELQAKDKEINQLVDEVTRLQQSLHRLQETSAQTASRLEEELETRRQHIVRLESKLDRQRDYDDIKREISVLRSVDLSQIPTGEPGKSLEHLLMERTKALQQAENLKPPTTPDTIIGGLASPLQRTATASPHGSSSVVVSGSNPTSLTSQQVLPTRSTPTPSSVTSTSTTTTTTTNLLFPPPLQNVETFGSFLGEEIVANWRRSLERSIINQQQQQQSQCTSTNSIKSPIQQSQKFQQSSQLPPLSPTSPQLPLLPPLSQTGLHQQYTSLYSLPTTPNLNQLQSPTDQINSSASTPVKSTTPLDNLDDMDKMPITDTSIELTTTTTTTTSSTVSTTTSTSIAQSITSPMSTSATTTTTTSTLGQLSLTSSHQLSTSNVEANNLLNGTSLSLAGLHLVGPTTTTIASPKSPHDDTLYNNNNNNNNINNNNINNNNNNSISHHLMMNNNNSNHSINNNNNNNSIGSISVLDSLKGPFRFDDRTHPFRFGDEFGAAGMAGRLGESLIPKGDPMEARLQEMLRYNMDKYASQNLDTLHIARRVRELLSIHNIGQRLFAKYVLGLSQGTVSELLSKPKPWDKLTEKGRDSYRKMHGWACDENAVMLLKSLIPKKDYVSGKEQGMPTFARGPQDGGPNDMNDERIAHMLNESSHLGMSRSEHDMSNDADSKSPSRLGCPSPLFGKDRYDSQNRRLKKYENDDIPQEKVVRIYQEELAKLMGRRVEDLRGPRDFPPSAMFSHFFSAGGGQSIQGMERTQDEIRIALDAYHRELQKLNSAPGQIPGLPNLPGLLALHQQALHQNHIANGGGGVQDLSLGKIEQRNKIMNGISEEDKEKMEEAMRHAGSAFSLVRPKQEPTQGPQSTPGGSSASSPLGNSILPPAMTPNEEFSAAAAASPLQRMASITNSLISQPSTPTHHSSNQRPLKAVLPPITQQQFDLYNNLNTEDIVKRVKEQLSQYSISQRLFGESVLGLSQGSVSDLLARPKPWHMLTQKGREPFIRMKMFLEDEQAVHKLVASQYKIAPEKLMRTGGYGGLPRKFNSACGTPMKPMPPTKLVQEQLQNAAKAQAAAQAAAAAQVAAQTAAAVQHHQEQAQMQLGPPQSSPQLGQHSIQGPQGLMLTSPGSHLASHLPTQLTIQELQKKQHQQQQREQQQQMSGLHSPHQMTPSPLRSLHPHISPSVYEMAALTQDLDTQTITTKIKEALLANNIGQKIFGEAVLGLSQGSVSELLSKPKPWHMLSIKGREPFIRMQLWLSDAHNVDRLQALKNERREANKRRRSSGPGHDNSSDTSSNDTADFYHASNSPGPGPGPGPAAKKQRVLFSEEQKEALRLAFALDPYPNVATIEFLA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00132435;
90% Identity
-
80% Identity
-