Aobl004739.1
Basic Information
- Insect
- Aphidecta obliterata
- Gene Symbol
- nfxl1
- Assembly
- GCA_963966015.1
- Location
- OZ014428.1:12317457-12327000[+]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 18 2 2.6e+04 -8.5 6.6 6 11 109 114 109 114 0.64 2 18 2 2.6e+04 -7.8 5.6 15 19 151 155 150 155 0.81 3 18 0.13 1.7e+03 -0.3 0.4 4 10 186 192 185 192 0.95 4 18 3e-08 0.00038 20.9 17.0 1 19 200 217 200 217 0.99 5 18 2e-06 0.025 15.1 17.4 1 19 253 271 253 271 0.97 6 18 0.69 8.9e+03 -2.6 1.9 6 10 296 300 295 300 0.90 7 18 3e-09 3.8e-05 24.1 8.1 1 18 306 323 306 324 0.97 8 18 1.3 1.6e+04 -3.5 1.0 5 10 348 353 348 353 0.86 9 18 2.7e-07 0.0035 17.9 10.7 1 18 359 376 359 377 0.97 10 18 0.00037 4.7 7.8 18.0 1 18 411 428 411 429 0.94 11 18 2.6e-10 3.4e-06 27.5 11.4 1 18 438 455 438 456 0.97 12 18 0.00039 5 7.8 6.6 10 19 505 514 503 514 0.92 13 18 0.058 7.5e+02 0.8 4.6 4 12 526 534 524 534 0.88 14 18 2 2.6e+04 -6.0 5.3 15 19 560 564 559 566 0.69 15 18 5.6e-05 0.72 10.4 5.7 1 11 603 613 603 614 0.99 16 18 7.6e-07 0.0099 16.4 16.9 3 19 644 660 643 660 0.94 17 18 1.3e-05 0.16 12.5 14.2 1 19 703 723 703 723 0.93 18 18 0.94 1.2e+04 -3.1 0.9 6 10 753 757 752 757 0.89
Sequence Information
- Coding Sequence
- atgaataatcgcaAAAAACGAGGAAATGCAAATGCATGGAACAAAATCCCAGAAAAAGCTCCACCTGGAAATAAGTTCAAAGAGGCTCAGAGAAAGCTTCAAGCATCTGTCCAGAAGCACATTCAAGATTATGAATCCTCGTCTGATGAGGAAGTAGTGGAAAGCAAAACTGTCATAGACAAAATTACTGCCACTTACACCACTAAAGGTGGAACTGATGACAAATTGCAAAGGACAGTGTCTTATTTGAGAGACAACCTTATATCAGGAGCTACAACATGTTTAATTTGCATTTCAAAAGTGAAAAGAGATGATCAGATATGGTGTTGTGAGTCATGTCACtgttttttccatttgatgTGCATTCAAAGATGGTCAAAAGATAGCATATCCCAAAAGAAGCAGTCACTCGCAACACATGTCCCATCAGGAGAACCATTGCTTTGGTGTTGTCCCAAATGTCGAAGAAATTATAAATTGGAAAATAGTCCTATGGAATATAGATgtttttgcaagaaaaaaatcaatccgACCTATCAGGCTCTCCTAGTTCCTCATTCATGTGGTGAAATTTGTGGAAGAGAATTAGAACCACCCTGTGGACATAAATGTTTACTTCTTTGTCATCCAGGTCCATGTCCTCCTTGTCCTGTGACAGTAAATGCAAAATGTTACTGTGGTGCAAAACCTCCTAGACTGCAAAGATGTAGTGACAAATATTGGTCATGTGGAGGATCATGCGGAAAATTACTTGAATGCGGTAAGCACCACTGCGATGACCCATGCCATGGAGGTGATTGCAAATCATGCACAAAAAAAAGTATCCAAAAGTGCAACTGCAGATCTCAAGCAAAATTGAGAGATTGTTCTTCCCCCGAATGGCAGTGTGAAAAGgtgtGTGGGAAATTATTCAGTTGTGGTATACATAAGTGCATGGAAGTATGTCATGCGGGAGTGTGCAATGTCTGCGAATTGAGTTTACCGAGGACATGCCCTTGTGGAAAAACCAGATATAATTTACCGTGCACTGAAGAAACTCCAACTTGTCCAGATACATGTGGCAAAATATTAGAATGTGGCGAACATTACTGTGTCCTGAAATGCCACAAAGGAAAATGTGGAACGTGTTTGGAAGTGGTCAAGAAAACATGTAGATGTGAACAGCATACCAAAGATGTTCATTGCAGCAAACCTTTTTATTGCGAGACaaaatgtaaaaacatgagGGACTGCAACAAGCATCCTTGTAATAAGAAGTGCTGCAACGGAGAGTGCCCACCCTGCGAAAAACCTTGCGGAAAAACATTGAGTTGTGGCAATCATAAATGTGCATCAGTTTGTCATCGCGGTCCTTGTTTTCCTTGTAATCTCATGGATGTTGTGACATGTAATTGTGGTGAATCTAAACTGAGCGTACCTTGTGGGAGGAAGAATCATGTTAAACCTCCAAAATGCCTTCTCTGGTGCCAAGCTCCCCCGGAATGCCATCATGAAAAACGCGAATTGCACAGATGTCACTTTGGTAACTGCCCTCCATGCAAACAAATTTGTGAGAATATTAGACCTAATTGTCCCCACCTATGTCCAGCACCATGCCATGATGCTGTTATGGTTAAAGTTGAAAGGGCCAAAGCAAGTGCACCCTGGGAAGAAGTGAAACcccaaaaggaaaaaaaatgtttgcctTGTCCTGATTGCATTGTACCTGTTCCGGTTGAATGCTTTGGAGGTCACGAAATATCAGATTGGCCTTGTCACCTTGCCAAAATAGGAAGTTGTTTCCGTCCTTGTGGTAGGCAGCTACCTTGTGGCAATCATAAGTGTACTTTAGCTTGTCACATAGTCCAAGATAGTACTGAAGATGCTTTGGCAGGAAGTAATTGCGAAATATGTGAGAATGAATGTAGCAAAACGAGACCAGAAGGCTGTCAACATACTTGTCCTAAGGCTTGCCATCCGGGAGCATGTCCTCCCTGTAAACAGATGGTCAGAATAAAATGTCATTGCGGTCTACTTCAACTTTATGTTGTATGCAAAGACCTATTGAACCCTGATAGACAAGAAGAAATTCAGAGTTGTGGAAATCAATGTCCTAAAAATTTAAAATGCGGCCATAGATGCAAAACGAACTGCCATCCTGGACCATGCTCAGAAAATAATCCTTGCAAGAAAAAAGTGAAGGTTTTTTGTGAGTGTAAGAGGTTGAAGAAAGAGATCAATTGTGACACTGTCAGAAATGGAGAGGCAAAAATTGAGTGTGATGAAGTTTGTGccgaattgaaaaaagaaacgGACAGACAGAATAAGATTTTAATGGAAGAAAAAACGAAACAAGAGGAATTGAAGAATAAGGAAGAACTGGAGaagtatatgaaaaaattcagtgGAAAAAAGAAGAATAGAGAAAGAAGAAGTCATTCCATTGATGATGATGTTAGTTTTCTGAAGAAATATTCAGTTCCTTTATCAGCACTATTAGtaataattatttcttttgtGACATTTACACTTATCACTGGCTGA
- Protein Sequence
- MNNRKKRGNANAWNKIPEKAPPGNKFKEAQRKLQASVQKHIQDYESSSDEEVVESKTVIDKITATYTTKGGTDDKLQRTVSYLRDNLISGATTCLICISKVKRDDQIWCCESCHCFFHLMCIQRWSKDSISQKKQSLATHVPSGEPLLWCCPKCRRNYKLENSPMEYRCFCKKKINPTYQALLVPHSCGEICGRELEPPCGHKCLLLCHPGPCPPCPVTVNAKCYCGAKPPRLQRCSDKYWSCGGSCGKLLECGKHHCDDPCHGGDCKSCTKKSIQKCNCRSQAKLRDCSSPEWQCEKVCGKLFSCGIHKCMEVCHAGVCNVCELSLPRTCPCGKTRYNLPCTEETPTCPDTCGKILECGEHYCVLKCHKGKCGTCLEVVKKTCRCEQHTKDVHCSKPFYCETKCKNMRDCNKHPCNKKCCNGECPPCEKPCGKTLSCGNHKCASVCHRGPCFPCNLMDVVTCNCGESKLSVPCGRKNHVKPPKCLLWCQAPPECHHEKRELHRCHFGNCPPCKQICENIRPNCPHLCPAPCHDAVMVKVERAKASAPWEEVKPQKEKKCLPCPDCIVPVPVECFGGHEISDWPCHLAKIGSCFRPCGRQLPCGNHKCTLACHIVQDSTEDALAGSNCEICENECSKTRPEGCQHTCPKACHPGACPPCKQMVRIKCHCGLLQLYVVCKDLLNPDRQEEIQSCGNQCPKNLKCGHRCKTNCHPGPCSENNPCKKKVKVFCECKRLKKEINCDTVRNGEAKIECDEVCAELKKETDRQNKILMEEKTKQEELKNKEELEKYMKKFSGKKKNRERRSHSIDDDVSFLKKYSVPLSALLVIIISFVTFTLITG
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00765225;
- 90% Identity
- -
- 80% Identity
- -