Aobl011958.1
Basic Information
- Insect
- Aphidecta obliterata
- Gene Symbol
- stc
- Assembly
- GCA_963966015.1
- Location
- OZ014430.1:37558579-37569792[-]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 13 2 2.6e+04 -4.8 3.4 6 10 356 360 353 360 0.69 2 13 0.069 8.9e+02 0.6 0.4 4 10 386 392 385 392 0.95 3 13 8.3e-06 0.11 13.1 12.7 3 19 400 416 399 416 0.93 4 13 6e-10 7.7e-06 26.3 13.4 1 19 452 470 452 470 0.98 5 13 6.7e-08 0.00087 19.8 10.8 1 19 510 528 510 528 0.98 6 13 1.1e-08 0.00014 22.3 12.4 1 18 568 589 568 590 0.88 7 13 0.94 1.2e+04 -3.1 1.6 5 10 617 622 617 622 0.93 8 13 0.0044 57 4.4 9.3 1 11 628 638 628 639 0.96 9 13 2 2.6e+04 -4.5 1.1 4 10 643 649 643 649 0.58 10 13 2.6e-09 3.3e-05 24.3 12.2 1 18 655 672 655 673 0.98 11 13 0.00046 5.9 7.5 13.8 1 19 712 729 712 729 0.89 12 13 1.6e-08 0.00021 21.7 13.0 1 19 765 784 765 784 0.97 13 13 0.003 39 4.9 14.3 1 18 794 812 794 813 0.93
Sequence Information
- Coding Sequence
- ATGTCTTTTTCAAACTACCAGCACACCGATGGATATGTAAATGGGACAGCAACTCCAATTTCTGGTAATGATACTACCATCAGAAGTGAAACAGCTGGTTCTAGTGAAACTGCTGGGAATGTACCATCTGGAACAGGGGCTGTTAGGAAAGCTAACAATGGGCCTAAGAGAAACGATGAACTAAAAACGTTTAGGAAGGAAGATTTCCATAAATGGAAACCACCCAAAAATCCGAATACAAAAAGAAATGGATACCAAAATTCTTTTGACGGGGATAATATGTCTTATTATAATTCTTCTTTTCGTGATAGaagaaaataccaaaaaaataaCAATCCAGAGTCAAATTTTTATagagataatttttattctgaaagGAATTCAAGATATTCTCATGAAGATACTACATATGAACATTCAGCTGATCCCATGTCTGATAAAAGTGGAAAGTCTAAGAATAGTTCTGTGAGAAATTTGCGGTATTATAATGAAGATATTCCAAGGAAAAATTCAGATTTAAacggaaaatatggaaataacgAAAGGAGTGCAAGATATAATGAAGAAACTTTCCGAGAAAATTCTGATGTACCTAAATCAAACAGAAACTCAGATGTAACAAATCGAaatggaaaatatgaaaataatgaaaggaGTTCAAGATATTATTATGAAGATAATCCTGATGCGCAGAAATTCAATAGAAATGGAAGATATAGAAATGGTTGGGACAGAAACTCTCGATATTTCAGTGAAGAAGAAAACATGACTAATGGAAGAAATGCACCATTTCATcagagaaaacaaaaaaataatggcaaggacacaaaaaaaaattataacaacaAAAAGAAGTTCGAGAAgaaagttgaaattgcTTCTCAACGAGAAAGACTCGAAGAAATGATCAAACGCAGAAATTTGGAATGTTTGGTTTGTTGCGAATTATTGAAACACAACAGTGAAGTTTGGTCTTGTAAACAATGTTACCACATTCTCCACCTGAAATGTACCCAAGCTTGGGCGAAATCTTCGCAAATAGAAAACGGTTGGCGTTGCCCGGCCTGTCAGAATGTCTGCAAAGAAATTCCTACGGAGTATTTGTGCTTCTGTGGAAAACGAAAGAATCCTAGGAATGAACCAGGTTTTATAGCTCACAGCTGCGGGGAAGTATGCTTACGACAACGTCGCAACTGCGAGCATACTTGCTTGATTTTATGCCACCCGGGACCGTGTCCGGATTGCACCATTCTTGTGGACAAATCATGCGGTTGCGGAAGGACGAAACAACAGGTTATGTGCAGCTCGGAAGTGGAAATCCTGTGCGCCAACAAATGTGAGAAATTCCTGGAGTGCGGTATCCATAAGTGCGACGAGAAATGCCACACGGGAGATTGCAAACCATGCAAGGAAATCCTCCACCAAATCTGTTTTTGCGAGAAAGCCAACAGAGAAGTTATTTGCAATGCCGACTTTAAAGGGAACACGAATTATTCTTGCGGAGGTACCTGCGAGAATACTTTAAAATGTGGGAATCACGAATGTCAGTATGTCTGTCATGAAGACGCTTGTAAACCTTGTAAGAAGGATTGTAGTTTGATTAAGACGTGTTTCTGCGGTAAGAAACCATTGGATGTTCCTAGGACGAGCTGTTTGGATCCTATTCCTTCGTGCGGTTGGTTGTGCCAGAAAATCCTCAAATGCGGCCCAAATGGTGATCGTCATAAATGTGAATCTGCTTGTCACGACGGGGATTGTCCGCCATGCGATTTTTCCACAATTCTAAAATGTAGGTGTGGATCTGTGAACAAGGAGATTCCTTGTCAAAAATTGGTCGATGACGATGCGAGATGTGAAAGGAAATGCACCAAGAAGCGTTCATGTGGCAAGCACAAGTGCAACCAGCGTTGCTGTATCGAAATCGACCACTTTTGCCCCCTTCCCTGCAACAGAACACTTTCTTGCGGTAATCACAGGTGCGAAATGACCTGTCATAACGGCAGATGCAAACCCTGCATGGAAACTAGCTTCGAAGAACTCTTTTGCGAATGTGGCTCGAAAGTTATGTATCCTCCGATACCGTGTGGAACCAAGCCACCGGTCTGTGATAAGCCTTGTTCCAGGCCGAGGGAATGCGGCCACGAAGTCAACCACGCATGCCATACCGGACCCTGTCCTCCTTGCACGGTTTTGTGTAAAAGATGGTGCTATGGTAAGCACGAACTAAGAGGGGCTATACCTTGCCACCAAGAGGAATTTAGTTGCGGGTTACCCTGTGGAAGACCCATGCCTTGTGGAAGACACAAATGCATCAGTCCTTGTCATTTAGgAAGCTGCCCTGTGCCTTGCAAACAACCATGCTTGTTTGAACGTTCAGCGTGTGGACATCCGTGTTATGCCCCTTGCCACGAGTCGCCTTGCCCGCAAACGAGTTGCAAGGGTAAAGTTGCAGTTTCGTGCGTTTGTGGAGTGCAAAAAGGCGTTCGGTCCTGTAATGACGTGCTCAACGAGATGAGAAATATAGAGTTGGCGCGATTGAGTGAAAAAATGATGAGTATGTCGAAAAATCAGTCTGTGGACATAAGTGATATGAGCAAGCCTAAAAGGCCTGATATTCTTAAAATCTTGGAATGTACAGAAGAATGCCGTGTGATCGAAAGGAACCGAAGATTGGCCATAGGACTCCAAATTCGCAATCCCGACATCACCCAGAAGCTCACCCCTCGTTATACGGATTTCATGAGAGGATGGGCCAAGAAAGATCCTCATTTCTGTCAAAGAATCCACGATAAATTGACAGAACTCGTGCAGCTGGCCAAGCAGAGCCAGCAGAAGAGTCGCTCCCACTCCTTCGAATCGATGAATAGAGATAAACGCCAGTTTGTCCATGAATATTGTGAGCATTTCGGTTGCGAGAGTGAAGCTTATGATGCCGAACCGAACAGGAATGTTGTCGCTACGGCCATAAGGGATAAATCCTGGCTGCCTAGTATGAGCCTTTTGGAGGTCATCCAGAGGGAGAATGGCCAGAGGAAAGTGCCTATGCCGTCTCATTTGGAGAGGAATTTGTGTTCTAAATCGGAAAGCGTAGCTCTGAAACCTTTGAGTAGAACTGTTAGATTGGGTGTAGTACAAGTTGATGCTGAACAttcgaaaaaatag
- Protein Sequence
- MSFSNYQHTDGYVNGTATPISGNDTTIRSETAGSSETAGNVPSGTGAVRKANNGPKRNDELKTFRKEDFHKWKPPKNPNTKRNGYQNSFDGDNMSYYNSSFRDRRKYQKNNNPESNFYRDNFYSERNSRYSHEDTTYEHSADPMSDKSGKSKNSSVRNLRYYNEDIPRKNSDLNGKYGNNERSARYNEETFRENSDVPKSNRNSDVTNRNGKYENNERSSRYYYEDNPDAQKFNRNGRYRNGWDRNSRYFSEEENMTNGRNAPFHQRKQKNNGKDTKKNYNNKKKFEKKVEIASQRERLEEMIKRRNLECLVCCELLKHNSEVWSCKQCYHILHLKCTQAWAKSSQIENGWRCPACQNVCKEIPTEYLCFCGKRKNPRNEPGFIAHSCGEVCLRQRRNCEHTCLILCHPGPCPDCTILVDKSCGCGRTKQQVMCSSEVEILCANKCEKFLECGIHKCDEKCHTGDCKPCKEILHQICFCEKANREVICNADFKGNTNYSCGGTCENTLKCGNHECQYVCHEDACKPCKKDCSLIKTCFCGKKPLDVPRTSCLDPIPSCGWLCQKILKCGPNGDRHKCESACHDGDCPPCDFSTILKCRCGSVNKEIPCQKLVDDDARCERKCTKKRSCGKHKCNQRCCIEIDHFCPLPCNRTLSCGNHRCEMTCHNGRCKPCMETSFEELFCECGSKVMYPPIPCGTKPPVCDKPCSRPRECGHEVNHACHTGPCPPCTVLCKRWCYGKHELRGAIPCHQEEFSCGLPCGRPMPCGRHKCISPCHLGSCPVPCKQPCLFERSACGHPCYAPCHESPCPQTSCKGKVAVSCVCGVQKGVRSCNDVLNEMRNIELARLSEKMMSMSKNQSVDISDMSKPKRPDILKILECTEECRVIERNRRLAIGLQIRNPDITQKLTPRYTDFMRGWAKKDPHFCQRIHDKLTELVQLAKQSQQKSRSHSFESMNRDKRQFVHEYCEHFGCESEAYDAEPNRNVVATAIRDKSWLPSMSLLEVIQRENGQRKVPMPSHLERNLCSKSESVALKPLSRTVRLGVVQVDAEHSKK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -