Basic Information

Insect: Aphidecta obliterata
Gene Symbol: -
Assembly: GCA_963966015.1
Location: OZ014431.1:14775284-14782952[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 24 0.00017 0.018 16.0 1.0 1 23 137 160 137 160 0.97

2 24 0.53 56 5.0 2.9 1 21 166 186 166 189 0.91

3 24 0.00083 0.087 13.8 2.1 2 23 202 223 202 223 0.98

4 24 0.00036 0.038 14.9 0.5 1 23 266 288 266 288 0.98

5 24 3.4 3.6e+02 2.4 1.6 1 23 294 317 294 317 0.75

6 24 0.02 2.1 9.5 3.3 1 23 329 351 329 351 0.97

7 24 0.002 0.21 12.7 1.8 1 23 394 416 394 416 0.98

8 24 3.2 3.4e+02 2.5 2.6 1 23 422 445 422 445 0.85

9 24 0.0028 0.29 12.2 0.5 1 23 460 482 460 482 0.98

10 24 1.2 1.2e+02 3.9 2.2 1 23 488 510 488 510 0.96

11 24 0.0072 0.76 10.9 0.3 1 23 528 551 528 551 0.96

12 24 0.00036 0.038 15.0 2.3 1 23 557 580 557 580 0.98

13 24 0.2 22 6.3 1.1 1 23 590 613 590 613 0.93

14 24 1.9 2e+02 3.3 2.7 1 23 630 652 630 652 0.97

15 24 0.072 7.6 7.7 2.3 2 23 659 680 658 680 0.97

16 24 0.12 12 7.0 1.5 1 23 703 726 703 726 0.95

17 24 0.0026 0.28 12.2 7.1 1 23 732 755 732 755 0.97

18 24 0.0025 0.26 12.3 3.6 1 23 766 789 766 789 0.98

19 24 0.21 23 6.2 5.1 1 23 803 825 803 825 0.98

20 24 0.017 1.8 9.7 0.7 1 23 831 853 831 853 0.98

21 24 2.3 2.4e+02 3.0 2.0 2 23 861 883 860 883 0.94

22 24 0.76 80 4.5 0.9 1 21 889 911 889 915 0.91

23 24 0.0013 0.13 13.3 0.3 1 23 942 965 942 965 0.94

24 24 0.017 1.8 9.7 1.8 2 23 971 993 970 993 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	24	0.00017	0.018	16.0	1.0	1	23	137	160	137	160	0.97
2	24	0.53	56	5.0	2.9	1	21	166	186	166	189	0.91
3	24	0.00083	0.087	13.8	2.1	2	23	202	223	202	223	0.98
4	24	0.00036	0.038	14.9	0.5	1	23	266	288	266	288	0.98
5	24	3.4	3.6e+02	2.4	1.6	1	23	294	317	294	317	0.75
6	24	0.02	2.1	9.5	3.3	1	23	329	351	329	351	0.97
7	24	0.002	0.21	12.7	1.8	1	23	394	416	394	416	0.98
8	24	3.2	3.4e+02	2.5	2.6	1	23	422	445	422	445	0.85
9	24	0.0028	0.29	12.2	0.5	1	23	460	482	460	482	0.98
10	24	1.2	1.2e+02	3.9	2.2	1	23	488	510	488	510	0.96
11	24	0.0072	0.76	10.9	0.3	1	23	528	551	528	551	0.96
12	24	0.00036	0.038	15.0	2.3	1	23	557	580	557	580	0.98
13	24	0.2	22	6.3	1.1	1	23	590	613	590	613	0.93
14	24	1.9	2e+02	3.3	2.7	1	23	630	652	630	652	0.97
15	24	0.072	7.6	7.7	2.3	2	23	659	680	658	680	0.97
16	24	0.12	12	7.0	1.5	1	23	703	726	703	726	0.95
17	24	0.0026	0.28	12.2	7.1	1	23	732	755	732	755	0.97
18	24	0.0025	0.26	12.3	3.6	1	23	766	789	766	789	0.98
19	24	0.21	23	6.2	5.1	1	23	803	825	803	825	0.98
20	24	0.017	1.8	9.7	0.7	1	23	831	853	831	853	0.98
21	24	2.3	2.4e+02	3.0	2.0	2	23	861	883	860	883	0.94
22	24	0.76	80	4.5	0.9	1	21	889	911	889	915	0.91
23	24	0.0013	0.13	13.3	0.3	1	23	942	965	942	965	0.94
24	24	0.017	1.8	9.7	1.8	2	23	971	993	970	993	0.94

Sequence Information

Coding Sequence: ATGGAAAATAAAACAGGCACTAGCTGGGAAAATGATGATGGCACCATTTCGATTGTTAAAACAGAAATAGAAGATTACGATTCGGCTCAACACGAGAATAGAATAAATGAAAATGATGAAACACACTATGATCAATATGAGCAAGGAGAAACAGATTTTAATGAGCCGTTTATGCCGAAACAGGAATATATCGATCCTGAAGGCAATTATGCTGAATGTGGAATGGGCAGTtatcaaaatgaagattatGTTCAAgataattttcaggaaacaTCTTCGAGTATGGGAGACGCTGAGAACTGGCCTCTCCTGCAGGGattcccGATGCCTGCGCCAAATCAACACTTCATGAATCAACCAGGTACGTCGGACATAAGCGATTTTGCAGACAAACGTGAAGAAGAGTTGTACCCTTGTAGTTACTGCGACTATGTTGGGTCCCATCCGAAATTACTAACTTCACACATGAATAATCGCCATATTAAAGCTGTCGTGTATCAGTGTCCTCACTGTCCATACAGTTCTACAATTCCTCGTAGTACAAAAGACCACATTCAGTGCAAGCATTTCAATGAAGACGATGACAAGGTGATCATCAAGCGAAAATGCGAGTTTTGCGATTACTGTGCCAGTAATGCAACGGCTTTGAAAAATCACATGAATAAGCATACGAAAGAAATTAAACATCAGTGCTCTTTTTGCGAATTCAACACTTTGTGGGAGGGATATCTTAAAATGCATATAAGGCGAAAGCACAGTGATCAATCTGCAGAGTCTGGGAATGTTGCGAAGGAATATCCCTGTCAGTATTGTGACTACAAAGCGGCTACTCCTAGTACACTCAAACTTCATACAAATAAGCATACTAGGGAACAGGAACACCAATGCCCTTACTGTCCTTACAAAACGGTATGGACAACTTATATAAAATTGCATATTAAAAATAAGcatttcaaacatgaaaaatcTCCTTCTGCCAAAGAGCACCCATGCAGTTTTTGCGATTACAAAGCGAAAAATTCAACTTTATTGAGACAACATACGAACAAGCATACACGTGAAAAGGTACATCAGTGTCCACACTGTCCATTCAATACCTTATGGGTCACCTATATGAAGCTCCATATCAAACGAAAGCATAGTGAGAACAATGAGAACGATGTTGCAGAGAAAAAAGATTTTCAGTGTCAATACTGCCCTTATAAAGCTATAAGTTTGAGTCATTTGAAAATACACGAGAACAAACATACCAAGGCTATCGAATACAAGTGCAATGAATGCGATTTCAAGACTACATGGTATGGATACTTGAAATTCCACATTAAAAGAAAACATTCTTTGAAAGTGAAAGAAGAAGatgagaaaacaaaatcaaGCTTTCCATGCAGCTTCTGCCCCTATAAAGCTATAAATCTGAGCACGCTGAAGGTTCATCAGAACAAACATACTCGGGAAAACATTTACAATTGTCCACACTGCGAATTCAAGACAACATGGAGAGCTTACATCAAAAGTCACATCCAGAAACATAACGCCAACAATTTCAAAACCAGAAAGCAAGGCGATGCCTCTATCAAGTCTTTCCCTTGTCAGTATTGCAATTACGTTGCCACCCAAATGGGATCGTTGAAACTACACGTTAATTCTAAACATACTCGAGAAAACATGCATAAGTGTCCAGAATGTGACTACGAATGTGCAGTGTATGGAAACTTAAGGATGCACATCAGGCGTAAACACGGTTTGAAACCAGACGATAATGGTAATTATCACTGCAAGGAATGTGATTTTGTTTCGGAGAGTGCTACTGAAATCAAGACTCACCTGAGTGAAAAGCATGATCTAAACATCGAAATTGATGATCTTAAGAAAGAAGACGAAAAAGTATACTCATGCCAATATTGTTCCTATACAACTCTTTATCAGCAGGTCATGAAGAAACATATTAACAAACATACAAGGCAGAACGTTATCAAATGTCCACACTGTCCTTATTCAACAGTTTGGAATCACTATATGAAAGTTCACATTAAAAGACATAACGAACCTAAAACGCTAACTGGCAGACAAAGGAGTACCAAACCTAATACTGATCAAAGCAGGCTGTTCCCTTGCCAATATTGTGACCATAGAAGCTTATCTTTCAGCAGTCTGAGAGATCACATAAATTCTGTGCACACTCGTGAAATTATCCATAAATGTCCATACTGCGATCATAAATGTACGTTGAAAGGGAATCTTAAAGGGCACATTCGCAGAAAGCATCCAGCGGAATTCATCGAACAAGAGAAGAGATATCAATGTGACCATTGCGAATTCAAAACTTCCGAaaggagaaatttgaagattCACTTGAAAAAAGATCATAACATAGATGACGCCAAAATAAAAGCGGAAAACGGAGAATACAAGTGCCAGTTTTGTGAATACAAAGCTAGGAGTCTTTATACCTTGAAAATTCACAGGCACAAACATACCAAGGAAAATGCTTATCGTTGCCCTCAGTGTGAATTTGCCACCAAGTGGCCTAATTACCTCAGAAAGCACATAAAGCAACATAGTATAGGAAAGTGCAGAGTTTCGTGTTTATATTGCGAATACAAAGGTTGCTCAACCTTCAGACTGAGGAAACATATAGAAAGTCTCCATAAAGCCGACGACTACTATCCTTGCCCCAAACCAAATTGTCAATTCAAAACAATTCACTATACCAGTTTGAGAATGCACTTGAAAGGCAGCATACACGCTTCAGGAGTTCCTAGATCACACATGTCTGTAAGCcgtaatttttcatacaaatatAAACCAAACGAAGGAAGATACTTTGCCTGTGACTATTGTGAATACGCATCAAAAACTCAGGGAAATTTAGATAAACACATAGAAAATAAACACGAGAAAAAAGCCATGAAATGTGGGTTGTGCAGCTATAGAACACCTTCGAAGAGCTACCTGAATAGACACTTTAAATTGAAGCATTCATCACTCGTGAAAGAAGATCCAGAAAATGTGAAAATAGTAGTACAGGAAGAAACGGAGACAAAAGAAGAGATGGAGACTAAAGCTCATTGTGAAATACCAGATAATGATATTCATGGAGATACATCTATAATAGATCCTCCTGAATTGGATAACAaggatgaaatatttttgtcttCAGATCAGAACGAATCTACTCCAAACATAAGTAATGAATGTGATGAAATGTCTGGTGTATTGAATCGTTCTAGGAGAAAAAGGAGTTTTGTTCCTTATTATGTTGAAGATAGCGATGAggaagaaaatgaaataatttgtgAAGATTTTCTCGAAGTAGAGTTGGGAGTGAATACTGGAACCAATGATAAACAAAGTGATGATGAAATCAACAAGGACCAACTTGTAGAGAATAATGAAATCATTACTCCTGAAGTTGGGGCCAGTGGTTTAGAACCAATACTAGATTGCTCGCTTAATCTTCAAAATGAAGCAAAAAACGATATTGTTTCGAGTGTGAAAGTTGAGATAACAGAGAATAATGATATCGCTTATACTCTTCGAAAAAAACCTGTTTCCAATCATATTGCATCAAGAAAAACCAGATTGGTGAAGCTGAAAAGTGTAGATCCATGTAAAGATTTTCAGAATATCAATCAAATAAATGGTTTATCTGGCAGAAATAAAGTTTccaaatcaaaaattataactaaAAGGAAAACAAGGGCAAGAATAaatggaaaaagaaaaattataataaaaaaaattataacgaaAACAAATAATAAAGGAAACAAAGTAGTGAAACACAATGATGCCTGCGCTGATAATactatttcaaatatcaaacaagaACCTGTAGAAGATTCTCATGCTGACGGAGTGGTAGCATATGAGAATAATATTCTTCCAGATAATGCGTCAAGTATTAACCAAAATATAAAAGTAGAGCCGGATGTGTTAAATATCGATTGCTTGCAAGGTGATTCTAATGTTAACATAAATGAAAGGTCATCTTTAAATGATGAAAAAGCACCTGATGAAGAGCCAATGAATCAggtagaaaatgaaaaagttattgCGAAAAAAAACGAAACCAGTTCTGTGTTAAAAGAAACCATAAATGATGTTGGAGGAGGGGAAAACAATATTGAAGAGAAATCCCAATGA
Protein Sequence: MENKTGTSWENDDGTISIVKTEIEDYDSAQHENRINENDETHYDQYEQGETDFNEPFMPKQEYIDPEGNYAECGMGSYQNEDYVQDNFQETSSSMGDAENWPLLQGFPMPAPNQHFMNQPGTSDISDFADKREEELYPCSYCDYVGSHPKLLTSHMNNRHIKAVVYQCPHCPYSSTIPRSTKDHIQCKHFNEDDDKVIIKRKCEFCDYCASNATALKNHMNKHTKEIKHQCSFCEFNTLWEGYLKMHIRRKHSDQSAESGNVAKEYPCQYCDYKAATPSTLKLHTNKHTREQEHQCPYCPYKTVWTTYIKLHIKNKHFKHEKSPSAKEHPCSFCDYKAKNSTLLRQHTNKHTREKVHQCPHCPFNTLWVTYMKLHIKRKHSENNENDVAEKKDFQCQYCPYKAISLSHLKIHENKHTKAIEYKCNECDFKTTWYGYLKFHIKRKHSLKVKEEDEKTKSSFPCSFCPYKAINLSTLKVHQNKHTRENIYNCPHCEFKTTWRAYIKSHIQKHNANNFKTRKQGDASIKSFPCQYCNYVATQMGSLKLHVNSKHTRENMHKCPECDYECAVYGNLRMHIRRKHGLKPDDNGNYHCKECDFVSESATEIKTHLSEKHDLNIEIDDLKKEDEKVYSCQYCSYTTLYQQVMKKHINKHTRQNVIKCPHCPYSTVWNHYMKVHIKRHNEPKTLTGRQRSTKPNTDQSRLFPCQYCDHRSLSFSSLRDHINSVHTREIIHKCPYCDHKCTLKGNLKGHIRRKHPAEFIEQEKRYQCDHCEFKTSERRNLKIHLKKDHNIDDAKIKAENGEYKCQFCEYKARSLYTLKIHRHKHTKENAYRCPQCEFATKWPNYLRKHIKQHSIGKCRVSCLYCEYKGCSTFRLRKHIESLHKADDYYPCPKPNCQFKTIHYTSLRMHLKGSIHASGVPRSHMSVSRNFSYKYKPNEGRYFACDYCEYASKTQGNLDKHIENKHEKKAMKCGLCSYRTPSKSYLNRHFKLKHSSLVKEDPENVKIVVQEETETKEEMETKAHCEIPDNDIHGDTSIIDPPELDNKDEIFLSSDQNESTPNISNECDEMSGVLNRSRRKRSFVPYYVEDSDEEENEIICEDFLEVELGVNTGTNDKQSDDEINKDQLVENNEIITPEVGASGLEPILDCSLNLQNEAKNDIVSSVKVEITENNDIAYTLRKKPVSNHIASRKTRLVKLKSVDPCKDFQNINQINGLSGRNKVSKSKIITKRKTRARINGKRKIIIKKIITKTNNKGNKVVKHNDACADNTISNIKQEPVEDSHADGVVAYENNILPDNASSINQNIKVEPDVLNIDCLQGDSNVNINERSSLNDEKAPDEEPMNQVENEKVIAKKNETSSVLKETINDVGGGENNIEEKSQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -