Aobl002191.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Aphidecta obliterata
Gene Symbol
Hivep3
Assembly
GCA_963966015.1
Location
OZ014427.1:29227862-29243841[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 8 7.4e-05 0.0078 17.1 0.9 1 23 212 234 212 234 0.98
2 8 0.0059 0.62 11.1 4.4 1 21 240 260 240 264 0.89
3 8 0.084 8.8 7.5 0.3 2 20 436 454 435 456 0.92
4 8 3.6e-06 0.00038 21.2 2.0 1 23 1082 1104 1082 1104 0.99
5 8 4.9e-06 0.00052 20.8 1.7 1 23 1110 1134 1110 1134 0.92
6 8 1.3e-06 0.00014 22.6 1.1 2 23 1632 1653 1631 1653 0.97
7 8 0.0017 0.18 12.8 1.6 1 23 1659 1683 1659 1683 0.91
8 8 0.00067 0.07 14.1 2.9 1 23 1701 1725 1701 1725 0.93

Sequence Information

Coding Sequence
ATGGAAAGCACCGTTGATAGTTACTTgcacaaaaaattcaagaaacaaTTGAGCTACGAACCCCGAAACAAGAATGAGAATAAAAATGGGCCCAAACCAACGGAACAGAACCAagagaagaaaacgctaccctTGGAAAACAGTCATCAAGTGAAAGAAACTATTTGTCGAATAGACAATACCCATACAGTGCCAAATACAAGTACAAATATAGTAAATGACAGTTTAAACGTCAGAAATGACATTTCGAACGTCAAGGGTCACGAATCAGCTAGTAAATATGACTGTTCGAACGTAGCCAATGACTGTTTAAGATATAGTACTGACAGTTTAAACGTTAACAAGTCTTCCATATCATTAGAAAGTCCTATAGTCACTTTACAATCTCATAACATATCGTATGTTCCAAATATTCACAGGTATGAAGTTAATTTTGATACAAAGTTTAGCTGTTCTGATGTTGTTAGTAACTCCCATGGACAAAAGTCTTCCATTTTAGATACTAACTTGTATAAGTACAACTACATGAAGTCTGATGACAATGTATCACCTGAAAGGGAacaaattaatcaagaaattgaaaagagATCAGAAGAAATACCCCACCAACCAGATAAGAGTTCTGGCGGAAAGTATGTATGCAACTATTGTAATTTGGCATGTTCTAAACCGAGTGTACTTCAGAAACACATCCGTGCTCACACAAACGAAAGACCATACCCTTGTGTCAGTTGCGGATTCAGTTTCAAGACTAGATCAAATTTATATAAACATTGTAGATCGAGAACTCACGCGAACAGAGTTCTTGGTAGTAAAGCTCGAGGTGAAGTTATCACTGAAGAGCAAGACTCTAATGCATTCGACACCATTCCAAGTAATGAACAATCACAAAATAGTGAAGCTGAACGCCCAGTTGACTATAAAACGAAATTGTATAAACCGAGATTCCACACAGCTTCCAAGTTATTTTACCAACAAGTTTCGAAAGAAAACATAGAAGATGAAAACAAACAACTGGATCACGGAGATTCCGACATCTTATCACATCATATCAATGAACTTATAACCAAAAATAACTCGAAGGTGAATTCCAACGAAGCTTATTTGCTGAAGAGGAAAGAAGAATATAACAGTGAATATGCCCAGGTTCCTCAAAGAGTGTTAACTAGAGATAacgaaggattgaaagttgctGATGAACCCTTGAACTTAACGAACAAAGTGAGGAAAAGATGTATGAGTGAGGCTGTTGAATCCAAGAGTTTAATAAAGGAGATATTGCTAAAAAATTTAGCTTCTGACATGCAGTGCCCTCATTGcaaaatgatttttcaaacTGTGACAGAGTTGGAACTGCACAAACTGAGAAATTGTAAGGGTTTCATAGCTCCAGGGGCAAAGTATGCTAGAAGCAGTTCAGTTAATGTAGCTTCTATACTTACCCAAAATAAGAACGCTTTTGATAGTATGCCTCAAATGCAAGCGGTGTTCCCACTCAAATCTCCAGGGCCATTTTTAGGGAAGACAAGACTTGTTGAAAGTGATAAAACTAAATCTTTCTCCTTTGATGATGGTCTTCCCAATATTTCGATGTATCCAAAGGCTAAAGAAATGATCACATCAAAATACCTACTAGCACCTTCATCTCTTCATAATGACCTTGAGAAAAAAGCACCAGTTAAACTATTTGGTGGAGAAGTTAAGATATCAGAGAATATGGGCGATAACAAGCGTTTTCAAATGGATAACAACAATGACGGATTTGAACCAGGAAACAGTTTTATGAATTATGGAGGGAAGATGAGCGAGAATAGGGTAATAAAGAGTAGTTTACATTCTGGGGGAACTGTTTTAACCAACAAAGGCAATTTTGATGGAGATTCATTGAACACAGTACAAAATGTTATAAGAATGTATGACGGTTCACCAGATTCGCCAGGTATGGATATGGGAAAGAGAAGAATTGGTTTCAACACCAATgtgaatgaaagaaaaaaaccgCCAGATTTAGTGATTTCATTTTCCACTGAAGAAATTAACTTTCCTAGTCCCTCATATATGAAGTACACAAACATAATTGATTTCAGCCAAAATGCTGTTAAATTATTGACACCTAATTTGAAGCAGCCAAATCTAATGGTGCCTGGATTACCTGTTCCCAATAAGTTCACATACCCAACACCAGAGAATCCGCACCCGTTGAGAATCGATGTTGATATGGACAATAACAATCCTCAAAATCTAACCCGGAGTAATTACTCGAACAGAACATCAACACCGGAAAGCTCAAAACTGATCcagaaatttcaggtccctgtACAAGAAATAGAATCTCAATCTCCTAATATGTACAACCCTATGAGTATTGTGGTTAATGGAAAAGTTGTGAGGTATGTGCCAGGAATGCCTGGACCTGTCATTGCAGAATCGCCTGTAGATTCTGTATACGTAAGAAGTGACTTATCTGCAACTTGTAAAACTGTAAAAACCTCTCCGAATTTGCCGAAGGTCTCTGAGGTGGAAATAACTAAAAAAAGAGATTTTAATTCTGAAGATGGCAGAATAATTTCCTCACCATCAGTACCGAAGCTAATAAAACCTGCTATGTTGGAAAAATTAGAAATAAAAACGGATTCCCCAACAAAGAGCTTTGAAGCAATTGAAATGAGATCTCCAGTTATTAAATTGAGTGAGATGAAATCTCCAATCAAAGTAACatcagaagaatcgaaaaaatttgctCGACCTAATAGTTTAGCATTGAAACCAACTTCTGCATCTATGAAACAACACCACGGACTTACGCCAACCTTGCTGAATCAAATTCTGATATCCCCTGATACTCCTAGAGTGGCCAAGAAATATGTGCAGCAGTATCTCAACGGAAACTACTTCAGTTACTTAGGTTTGAAATCAACAACCAGGCCTGTGTACTGTACTTTGAATAAAACTCAACCCTCGTATGTTCCACATTTCAAAAAACTCAGTATGTATTCAGAATGGAGACAACAAGATACAAAGACGGAAAAGTTTTATGCTGCTGGTTATGACTCAAGGCAGAAATGTTCAAGGTACACTGTGGCAGGTCCCAAGAATTCGGATTTGATGGCTCATTCAAGCTATAAGttcaCCTTACCAGAATCTATGAAAGACAATGACGATACCCAGAAACCCAGCTCAATCACGGGTGGCTATGAGTGTAATGATGATTATACATATATAAGGGGAAGAGGTCGAGGCAGATATGTTTGTGAACAATGTGGGATAAGGTGCAAGAAACCTTCTATGTTGAAGAAACATATACGCACACATTCCAATGATAGGCCTTATGCTTGTAGCCTTTGTAATTTCAGtttcaaaACAAAGGGTAACTTAACGAAACATATGAAGAGTAAAGCTCATACTAAAAATTCCACAACGAGTTTAGGATCTAATTCATCTACTCAGCAAAGTGGAACACCTAGCTCAGAGTCTGAAACTGATGACAGCGGGATGGATAGTAGTGACGAGTCAACAAGGCATCAAGAGCACGAAGCCGCATATGGATTGCTTTCTTTGTCCCAAAAATCCACCCACAATATTGCGAACAACTCCTTCTCTCCAATCTCAACTACCAGTGCGCTAGCAGATCATTCTCCACATCAGATCAACATCGACATCGCCAACCGAATAATGAATACGGAAGAAATTGCCTTCGTAACTAAAACGAACTACGCCAAAAATAAGTGTCTGGAGCAACCTAGTGTGTTGAAGTTGAACATCAAGGATATTGGTATAGCAGTAcctgaagaaaagaaaacaccTGAAGTTAATACTATAACGATGGTTTTAGGAAAATCTAGCGAAAATAGACCACTGACTTATCCCTACATTATGTCGGATATCATATTGGATGAACCTATGAGTGTTAGTTCTGAGAATACAGACAATTCAAGTCGATATGAGCCTAAATCACCAGAAAGTTCAGAGCCAAAGTGTATTACGCAGTTCCATGTTATACAAAGGTATGCTTCAAATGAAAAAGAGAGTACTTCGAAGGAAATCCCTATTGAAACTGTGAAGAATATCCCTGAGCCCTCATTTTCAAAAGAAAGGATGAGTGCTGTGCATTATCCATTAGAGAGAAATGAAAGAAGCGTTATAGTCACCCAAAATTTGAGAGTCGTGGGCAATCCAAGAAATTCTGATATGCCATCACCATCAATAAGAATTAATGATAACCCTATTCTCAATGGGCCCTTGAAGGAAACCAAAAAAAGGAAATTGATGGATGACACTGAGTTTGGTCCTAAAGTACAAAAACTAGATGAAGTGATAGATTTATCTGTGAATACTGTTCAGAAAAATAGTGATTCCAGTGTTAATCTGAAATTTAATGGTAATAGTGATGTatatcaaaactatgaatttggttgtcacaaaaataatattcatgaaCATAGGACGTTAAATGAACAAGTTCCTCAGGATTCATCACCTAAAGAAAGTTCTAAGTTATCTGAATTAGAATATAAGAATATTGAATACAGTGCGCAGTATCCAAAAATCAATGGGAATGTACTCATTTTGAAGAACATTGGAGTGCCTAACGAAGATTCTAATGGAATCACTAACATAAATACAAACTACATTGTAGAACCACAGGCGACGATCACAGTATCAAAGTCAGATTCTCCTAAATTATTTGGAGAGTTTGATAATAGTGCAATGGAAACTTTAGCCGATATCGCTACCAAGCAGGTGAAAATAGAGAAGAATGCTATGGCAAAAAGTGTGGCTTCAGAATATTTGAAATTAGCAACTAAAAACGAATTTCCAGCTGGTGAAAATGAAATGTTTCAACCCATAGGTAAAGAAGTGAACGACTTGATTGTCAAGGCAGAAGGAAGTAAGAGCTGTACTATTTGCTCCAAGAGTTTCAGCAAACCCTCACAACTTAGATTACATATGAATGTTCATTACTTGGAAAGGCCTTTCAGGTGCGAACCCTGCTCCGTTAGTTTTCGTACTAAAGGACATCTTCAGAAACATGAGAGAAGTGCTAGTCATCACAATAAGttaTCATCCTCACCCGCCCAATCATCATCCGAACCACGCCCATTCAAGTGTACAGACTGTAATATTGCTTTTCGAATACACGGGCATCTAGCCAAACACCTCCGGTCCAAAATGCACATCATGAAACTTGAATGTTTGGCCAAAATACCTTTTGGACTGTATGCTGAATTGGAAAGATCCAACAGCTTGCTTACAGAAATAAACACAGCCGATGGGGACCAATGTCTAGATAGCCTGAGGACTTTAGCGAAGAAAGTTTTCATGAACGACCCAGCCAAACTGAAAAATTTAAGGTTTACGCCGCACGATCTGAGAACTAAAGGATTGCAGACGCAGGCAATCCTGCGTGAATCTCGAGGACGAGAACTGGATGGAGTGTCTTCTGCTGATCCGGATTTGAATATTGCTGCTGGGAGGATTGACATTGCTGATACTCCCGGTGCTTCCGATATTGTGACTTGTGCGCGGGGGCAGTTAACGCAGAGTGTTGGTGATGCTGATCTTGCCTGCGGTGATTCGAGTAAGCGGGGTGGGGTTCACGAAGGCTCAGACGGAGTTTTCGCCGATACTGAGTGCTATGCTGACGACATCCAGCTTAAGTTCAGGTTttcgcccgataacattcactTGGCTTCCCACCGTATTGGTAGTGATCTTTCCACTGTGGATCGATGTGCTCTGAGTCATAACCTGGTTCTGAACCCATCTAAGAGCAAGATCATCATATTTGCGAAGGAAGGAGAGTATAAAAGTATTGAGGACAGTAAGTGGCATACCGATACCTGTGTCGGATTGTGTAAGGAGTTTGGGATTGAAGTTGGATAG
Protein Sequence
MESTVDSYLHKKFKKQLSYEPRNKNENKNGPKPTEQNQEKKTLPLENSHQVKETICRIDNTHTVPNTSTNIVNDSLNVRNDISNVKGHESASKYDCSNVANDCLRYSTDSLNVNKSSISLESPIVTLQSHNISYVPNIHRYEVNFDTKFSCSDVVSNSHGQKSSILDTNLYKYNYMKSDDNVSPEREQINQEIEKRSEEIPHQPDKSSGGKYVCNYCNLACSKPSVLQKHIRAHTNERPYPCVSCGFSFKTRSNLYKHCRSRTHANRVLGSKARGEVITEEQDSNAFDTIPSNEQSQNSEAERPVDYKTKLYKPRFHTASKLFYQQVSKENIEDENKQLDHGDSDILSHHINELITKNNSKVNSNEAYLLKRKEEYNSEYAQVPQRVLTRDNEGLKVADEPLNLTNKVRKRCMSEAVESKSLIKEILLKNLASDMQCPHCKMIFQTVTELELHKLRNCKGFIAPGAKYARSSSVNVASILTQNKNAFDSMPQMQAVFPLKSPGPFLGKTRLVESDKTKSFSFDDGLPNISMYPKAKEMITSKYLLAPSSLHNDLEKKAPVKLFGGEVKISENMGDNKRFQMDNNNDGFEPGNSFMNYGGKMSENRVIKSSLHSGGTVLTNKGNFDGDSLNTVQNVIRMYDGSPDSPGMDMGKRRIGFNTNVNERKKPPDLVISFSTEEINFPSPSYMKYTNIIDFSQNAVKLLTPNLKQPNLMVPGLPVPNKFTYPTPENPHPLRIDVDMDNNNPQNLTRSNYSNRTSTPESSKLIQKFQVPVQEIESQSPNMYNPMSIVVNGKVVRYVPGMPGPVIAESPVDSVYVRSDLSATCKTVKTSPNLPKVSEVEITKKRDFNSEDGRIISSPSVPKLIKPAMLEKLEIKTDSPTKSFEAIEMRSPVIKLSEMKSPIKVTSEESKKFARPNSLALKPTSASMKQHHGLTPTLLNQILISPDTPRVAKKYVQQYLNGNYFSYLGLKSTTRPVYCTLNKTQPSYVPHFKKLSMYSEWRQQDTKTEKFYAAGYDSRQKCSRYTVAGPKNSDLMAHSSYKFTLPESMKDNDDTQKPSSITGGYECNDDYTYIRGRGRGRYVCEQCGIRCKKPSMLKKHIRTHSNDRPYACSLCNFSFKTKGNLTKHMKSKAHTKNSTTSLGSNSSTQQSGTPSSESETDDSGMDSSDESTRHQEHEAAYGLLSLSQKSTHNIANNSFSPISTTSALADHSPHQINIDIANRIMNTEEIAFVTKTNYAKNKCLEQPSVLKLNIKDIGIAVPEEKKTPEVNTITMVLGKSSENRPLTYPYIMSDIILDEPMSVSSENTDNSSRYEPKSPESSEPKCITQFHVIQRYASNEKESTSKEIPIETVKNIPEPSFSKERMSAVHYPLERNERSVIVTQNLRVVGNPRNSDMPSPSIRINDNPILNGPLKETKKRKLMDDTEFGPKVQKLDEVIDLSVNTVQKNSDSSVNLKFNGNSDVYQNYEFGCHKNNIHEHRTLNEQVPQDSSPKESSKLSELEYKNIEYSAQYPKINGNVLILKNIGVPNEDSNGITNINTNYIVEPQATITVSKSDSPKLFGEFDNSAMETLADIATKQVKIEKNAMAKSVASEYLKLATKNEFPAGENEMFQPIGKEVNDLIVKAEGSKSCTICSKSFSKPSQLRLHMNVHYLERPFRCEPCSVSFRTKGHLQKHERSASHHNKLSSSPAQSSSEPRPFKCTDCNIAFRIHGHLAKHLRSKMHIMKLECLAKIPFGLYAELERSNSLLTEINTADGDQCLDSLRTLAKKVFMNDPAKLKNLRFTPHDLRTKGLQTQAILRESRGRELDGVSSADPDLNIAAGRIDIADTPGASDIVTCARGQLTQSVGDADLACGDSSKRGGVHEGSDGVFADTECYADDIQLKFRFSPDNIHLASHRIGSDLSTVDRCALSHNLVLNPSKSKIIIFAKEGEYKSIEDSKWHTDTCVGLCKEFGIEVG

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00020781;
90% Identity
-
80% Identity
-