Basic Information

Insect: Aphidecta obliterata
Gene Symbol: zfh1
Assembly: GCA_963966015.1
Location: OZ014432.1:21684282-21698306[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 0.0098 1 10.5 2.1 2 23 52 74 51 74 0.97

2 9 0.0019 0.2 12.7 0.2 1 23 105 127 105 127 0.95

3 9 6.9e-06 0.00072 20.4 0.6 2 23 134 155 133 155 0.97

4 9 1.3e-06 0.00013 22.7 5.9 1 23 164 186 164 186 0.99

5 9 5.4e-05 0.0057 17.5 1.0 1 21 192 212 192 213 0.95

6 9 0.0032 0.34 12.0 2.0 2 20 450 468 450 470 0.94

7 9 8.6e-06 0.0009 20.1 0.9 1 23 819 841 819 841 0.94

8 9 0.00062 0.065 14.2 10.7 1 23 847 869 847 869 0.98

9 9 0.0018 0.19 12.7 4.4 1 21 875 895 875 896 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	0.0098	1	10.5	2.1	2	23	52	74	51	74	0.97
2	9	0.0019	0.2	12.7	0.2	1	23	105	127	105	127	0.95
3	9	6.9e-06	0.00072	20.4	0.6	2	23	134	155	133	155	0.97
4	9	1.3e-06	0.00013	22.7	5.9	1	23	164	186	164	186	0.99
5	9	5.4e-05	0.0057	17.5	1.0	1	21	192	212	192	213	0.95
6	9	0.0032	0.34	12.0	2.0	2	20	450	468	450	470	0.94
7	9	8.6e-06	0.0009	20.1	0.9	1	23	819	841	819	841	0.94
8	9	0.00062	0.065	14.2	10.7	1	23	847	869	847	869	0.98
9	9	0.0018	0.19	12.7	4.4	1	21	875	895	875	896	0.96

Sequence Information

Coding Sequence: ATGGTAGCGCGCAGTGATAGCATGTTTGGTTGTTACGACAGTTACTCCTATCGACTATGGAGTCTGGCAAATGTATGGAACACCGTTCAACTCCCTCCCCTAACAAATGGTGCAATCAAAGAAGAAGACATAGGGCCACATACAGACTACATAAAATGTTCGCAGTGCCAGAAGACTTGCGGGACCTTCTTGGCGTTGAAAGAACACATGGAAACCTCGCATGCGGACTTGGGAACCTGCTCCGAGAATGGAAACTCCTCGAACCACAGTGCACTGTCACCAACGCCTAGTCTGGTCAGTTCTGGTGGACCCTTTGCTTGCTCACAATGTGCTAGTTCTTTCCCCACTAAGGACCAGTTGGAAAAACATGAACTACTACATTCTCCCAACGCTCAAGTGTCTTGTAAAATCTGTAATAAAACATTCGCCAACGTCTATCGTCTTCAACGCCACATGATAAGTCATGATGAGAGTGCCGTCCTCAGAAAATTCAAATGTACAGAATGCGACAAGGCGTTCAAATTCAAACATCACCTCAAGGAGCACATACGAATCCACAGTGGAGAAAAGCCCTTCGAGTGTGGAAACTGCGGAAAGCGATTTTCGCATTCAGGATCCTATTCTAGTCATATGACATCGAAAAAATGCCTGGTGATGAACATCAAGCTAGGCAGAACGAGAGCACCGGCCAATTCTCTCATGGACAAGAATGTCCAACAGAACGGTCGCCTACTCAAACGATGCAACGACAGTCCAATGAACAACAACATCTCAAGTAGTCCAGATCACAATTCGTTCTTGCCAATCCTCCCCAAATACTCAGATGCTGCAGCGGCCGCCTTTTTGCAGTCTTCCCTAGCTGCGAACTCGCCAGTGGCACCTTTCTATCTCACCCCTCCAGGTTTGTTGAACGCGCCTCACCCTCATACGTACAACTTTCCGACGTTGAGTCAAATTTTGGATCACATACAACAACAGAGAACTTCCCCTGCCAGGCATCACGTTCCAGCTGAATACAGTGAAAGTCAAAACGAGGATAACCTCAAAGAGAAGGAAATAGATGTAGAGTCGCCCCAAGACGATCAAATAGACAATCCACCAAAGTCGAATGAGTCTAGTTACGGGGATCTAGTCATGGATGAAGACGCAGAACACGAGGAACCTAAAGAAGACAGAAAAGACAACGGTGAATTGGAGGCTGTCAAGAGGATTTTAGAAACTGTAAACGCATCTGTCACCAAACAGTTTCTTCAAGCCAACATGCAAAAGTTCTCTTCTGAATCCTCCAACAACAGCGATTGCCAAAGTAATTTTTCTGCATCGTCTCCAAAAGCAGAACCCATCAACAGGTGCAATAATTGCAGGAGGGTGTTCGCTACCTCCAGCCAATTGAGTGATCATAAATGTGATATCAAAAGCGAAGGCTTGGCTGCAAGATTGGAAGAGGCCGTGGCAATCAAATCCGAAGAATTCAGAAAAGAGAGGAGCGATAGTTTCAGCGGCAACGAAGACCAGGACTTCGACAGGACGAAGGGCGACGATGAAATTTACTGCGAATCTGCTGTAACCACCACCGATCACTTATCTGAAGATGGGAGGAAAGTACGTGTTAGATCTTTGATTTCTGATGAACAACTCAAGATACTAAAAGAAAGTTATGCGTTGAATCCCCGTCCCAAGAGGGAAGAATTAGAAAAGATTGCGGCCTCGATTGGATTCGCTGTGCGAGTCGTCCAAGTATGGTTTCAAAACACGAGGGCAAGAGATCGAAGGGAAGGGAGATTGATACATGTTCCATACAGTCCATTAGCTCCTCAGAAATACTCGCCAATGAGTCATTCTTCGAGTCCGCATATGACGGTTCCTAAAACGGAAGGCGATTCTTATATGAACCAATACGTTGATGATGAACCATTGGATCTTTCATTGAAGAGAAGTCGCTCTTTTGAATCTTCCCCATCAAGTTCCCCTACCAGACCTACCTCAGCGAATCCTAAATCAGAATTCTGTGATGAAGTCGTTAATCTCAGTAGAAAAACCGCAAGCAGTCCGTATATGCCCTATTCGACCAGTTACCACAACTCTAATTCCTCAGAACTTCCCTCCGCCTCTTCTCCCTCAGAATTGACCAACAGTAGCCGTCTAGCGCAAATCTTAGCTCAACCTCCTCACAAGTTGAACCTACCCGCCATGGGGCTGGTACCTATGGAACAACTCATGCAGTTTGGCGTGACAGATCTTCCTAGTTTGTCCCAATTGATAAACAACAATCAGATTCCCAATGGTCTCAGTCCCAACCACGAGAAAAAATGGCTCGATTATAAAGACATTAAAGTGGAAGTAGGCGATGAGGATCCAGCCCATTTGTCGAAAAGATTGAAGATGTCGCAATACATGTTGAAAAGCTTGGGCAGTCCGCTACTGGGAAACCATGAGCAAGAACTTGAAGGCCAGTTCATATGTGATCAATGTGATAAGGCGTTCTCCAAGCAGAGCTCCTTGGCAAGGCACAAATATGAACATTCAGGTCAGAGACCGCACAAATGTGACGAGTGCACGAAGGCGTTCAAACACAAACACCATTTGACTGAACACAAGCGTCTGCATAGTGGAGAAAAACCATTCCAATGTACAAAATGCCTGAAACGTTTTTCCCACTCAGGATCGTACAGCCAACACATGAACCATAGGTTTTCATACTGTAAGCCCTACAGAGAGTAA
Protein Sequence: MVARSDSMFGCYDSYSYRLWSLANVWNTVQLPPLTNGAIKEEDIGPHTDYIKCSQCQKTCGTFLALKEHMETSHADLGTCSENGNSSNHSALSPTPSLVSSGGPFACSQCASSFPTKDQLEKHELLHSPNAQVSCKICNKTFANVYRLQRHMISHDESAVLRKFKCTECDKAFKFKHHLKEHIRIHSGEKPFECGNCGKRFSHSGSYSSHMTSKKCLVMNIKLGRTRAPANSLMDKNVQQNGRLLKRCNDSPMNNNISSSPDHNSFLPILPKYSDAAAAAFLQSSLAANSPVAPFYLTPPGLLNAPHPHTYNFPTLSQILDHIQQQRTSPARHHVPAEYSESQNEDNLKEKEIDVESPQDDQIDNPPKSNESSYGDLVMDEDAEHEEPKEDRKDNGELEAVKRILETVNASVTKQFLQANMQKFSSESSNNSDCQSNFSASSPKAEPINRCNNCRRVFATSSQLSDHKCDIKSEGLAARLEEAVAIKSEEFRKERSDSFSGNEDQDFDRTKGDDEIYCESAVTTTDHLSEDGRKVRVRSLISDEQLKILKESYALNPRPKREELEKIAASIGFAVRVVQVWFQNTRARDRREGRLIHVPYSPLAPQKYSPMSHSSSPHMTVPKTEGDSYMNQYVDDEPLDLSLKRSRSFESSPSSSPTRPTSANPKSEFCDEVVNLSRKTASSPYMPYSTSYHNSNSSELPSASSPSELTNSSRLAQILAQPPHKLNLPAMGLVPMEQLMQFGVTDLPSLSQLINNNQIPNGLSPNHEKKWLDYKDIKVEVGDEDPAHLSKRLKMSQYMLKSLGSPLLGNHEQELEGQFICDQCDKAFSKQSSLARHKYEHSGQRPHKCDECTKAFKHKHHLTEHKRLHSGEKPFQCTKCLKRFSHSGSYSQHMNHRFSYCKPYRE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01024340;
90% Identity: iTF_00130386;
80% Identity: iTF_00130386;