Aobl005113.1
Basic Information
- Insect
- Aphidecta obliterata
- Gene Symbol
- bab1
- Assembly
- GCA_963966015.1
- Location
- OZ014428.1:20685786-20688707[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2e-17 1.6e-14 53.8 0.0 1 43 28 71 28 73 0.95 2 2 1.1 9.4e+02 0.2 0.5 6 15 170 179 165 184 0.80
Sequence Information
- Coding Sequence
- ATGTGGCAGAAATGCTGGAACACAAATCAGAGTCTGGTTCATCACTTGCGCTTCAGAGAAAGAGGACCTCTGAAATCGTGGAGACCGGAGACGATGGCTGAAGCGATCTTCTCAGTGTTGAAGGAAGGTTTATCGCTCTCCCAGGCGGCTAGGAAATACGACATTCCTTATCCGACGTTTGTACTTTACGCTAATCGAGTTCACAATATGCTAGGACCCTCTGCTGATGGTGGATCAGATCTCAGGCCCAAAGGTCGAGGCCGACCACAACGGATCCTTCTAGGAATATGGCCGGATGAACATATAAGAGGTGTTATAAGAGCAGTTGTTTTTAGAGACTCTCATCATATCAAAGAGGAGCAACAAATTCATTATCCCAGAATTCATGATTCTGTCAATACCGTGAACACATCCGGCGTGAATACTGGAACCACAGCTAATATCCAAAACTTCCCAAACTCATCCTGCAACGATGCTTCGGACCCTAATGTATCTCCAGCAGCGGCTGCTGCAGCTGTGGCAGCGGTAGCGCAAGGTCTTCGACAGCAGATGTGCAGCATGGTAGCGGCAGCTAATCAAAGTTCCGCTCACGAAACGAATCCCGTGGCGAGTTTGGTGAACTCGCTTGCTTTCGGCAACGCCTGTGGTAATATGCAGAACAACGGTTCACTTCCAATGGGCATGATGCCCTCGATGAGCCACATAACCTCTTTGAGGAGTATAAGTAGTCCTGCAGGTTGCATACAGGACCTTAGGATAAGTCCTTCCGAGTCGGCTCTAGAAAGTCCCATATCTTCCCCACTAGGCCTATCAGTTCCGAGTTCAATGGAACAGACCATGAACTTATCGATGTCCCACAACATGAACACTACTAGTGCGGCGGGTGTGACCGGTATGACGTACAAATCCTCTAGGCCGTACTCGTCTCCGAGACCTGAAAACCTCTTCCAAGAAGATATAAATGATCTGGTGAAACCAATCAATTCTTCCACCCCTAACTCGCGGGAGTCCATGCCTATCAAACTAGAACCAATGACAGAATGTCGAGGCGAATGA
- Protein Sequence
- MWQKCWNTNQSLVHHLRFRERGPLKSWRPETMAEAIFSVLKEGLSLSQAARKYDIPYPTFVLYANRVHNMLGPSADGGSDLRPKGRGRPQRILLGIWPDEHIRGVIRAVVFRDSHHIKEEQQIHYPRIHDSVNTVNTSGVNTGTTANIQNFPNSSCNDASDPNVSPAAAAAAVAAVAQGLRQQMCSMVAAANQSSAHETNPVASLVNSLAFGNACGNMQNNGSLPMGMMPSMSHITSLRSISSPAGCIQDLRISPSESALESPISSPLGLSVPSSMEQTMNLSMSHNMNTTSAAGVTGMTYKSSRPYSSPRPENLFQEDINDLVKPINSSTPNSRESMPIKLEPMTECRGE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01023758; iTF_00965045; iTF_00020124;
- 90% Identity
- iTF_01023758; iTF_00965045; iTF_00020124;
- 80% Identity
- -